Oncorhynchus kisutch (coho salmon): 109866707
Help
Entry
109866707 CDS
T09179
Name
(RefSeq) probable ribonuclease ZC3H12D isoform X2
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109866707
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
109866707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
109866707
NCBI-ProteinID:
XP_020311101
Ensembl:
ENSOKIG00005019157
LinkDB
All DBs
Position
LG21:complement(15337106..15355380)
Genome browser
AA seq
610 aa
AA seq
DB search
MDQQHGKVERFLKLGYSHSDIVRVLESLRHDAQTNDILEELIKTCQTPTTTTPSIPVSRS
AYSSPQLIPRGCSSPQPSQPLRPSSATDRDPTGGFRPVVIDGSNVAMSHGNKQVFSCRGL
LLAVRWFLERGLRDITVFVPLWRKEQPSPEAPMTDQHILHELEKRTILVYTPSRCVNGKR
VVCYDDRYIVKLAYESDGIVVSNDNYRDLQIERPEWKTFIEERLLMYSFANDKFMPPDDP
LGRNGPTIDNFLMKKQWTPENKQQHCPYGKKCTYGVKCKFYHPERSNQSQLSVADELRAK
SKPTAQTDRERSFLPSGPSPALIQEVSQEAHPYTSPYELDLTTTHLYRYLSTPPPLIKEE
HSHSHRASPSDQFTSQRKTGSPTLHHRSSLRLCPSPDTDEAFSSLEASLSRLYVQDQTNN
TKGPVVSYTYSSGVANCSQHSGDFYPSSTSSSHASNQQRLSLGRLSSAWDSPQKLPQCGC
DDSQSFECSLCMYRHQHLQSKLGGCSYAVHSNHIHFTEQQYFQSPPLQRQSHSLPEHSPG
QGLSGERVGMTRSNGGKAPESEQRRSVKNQLSTLFPHSMVDYVMSVYPHTLNMSELVPLI
QRFRISHIPF
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggaccagcagcatggaaaagtggagcgcttcctcaagctgggctactcccacagtgac
attgtgcgcgtgttggagagcctgcgccatgacgcccagacaaacgacatactggaggag
ctgatcaagacctgccagacccccactaccaccaccccatccataccagtcagccgctca
gcctactccagcccacagctgatcccccgaggctgcagctctccccagcccagccagccc
ctgcggcccagctcagctacagacagggatcccactgggggattcagaccagtggtcatt
gatgggagcaatgtggccatgagccatggcaacaagcaagtgttttcatgccgggggctg
ctgctggcagtcaggtggtttctggagaggggtcttcgtgacatcactgtgttcgtgccc
ctgtggaggaaggagcagcccagtcccgaggcccccatgacagatcagcacatcctccat
gagctggagaagaggacgatcctggtgtacaccccgtcacgctgcgtcaacgggaagaga
gtggtgtgttacgacgaccgctacatcgtcaagctggcctacgagtccgacggcatcgtt
gtgtccaatgacaactacagagacctgcagatagagaggccagagtggaagacgtttata
gaggaaaggctgttgatgtacagcttcgccaatgacaagttcatgcctccagatgatcct
ctgggaaggaatggcccaacgattgacaactttctgatgaaaaagcagtggaccccagaa
aacaagcagcagcattgcccgtatggaaagaagtgtacttacggagtgaagtgcaagttc
taccacccagagcgctccaaccaatcacagctgtctgtggcagatgagctgagagccaag
agcaaacctactgctcaaacagacagggagcggtcatttctcccctcaggccccagccct
gctctgatccaggaagtcagccaggaggcccacccttacacatccccttatgagctggat
ctaactactactcatctatacagatatctatccacaccgcctccccttataaaagaagag
cattcccattcccacagggcttcgcctagcgatcagttcaccagccagagaaaaacaggc
agcccaactctacaccacaggtccagcctccgcctctgccccagcccagacactgacgag
gccttcagctccctggaagcctccctatccagactctatgtccaggaccagaccaacaac
accaaggggccagtggtgtcctacacctacagcagtggggtggccaactgcagccagcac
agtggggacttctacccttccagcacttccagcagccacgccagcaaccaacagaggctc
agcctgggtagactctcctcagcctgggattccccgcaaaaactgccacagtgtggctgt
gacgactcacaaagctttgagtgcagcctgtgcatgtacagacaccaacatctccagtca
aagctaggagggtgctcctatgctgtacacagtaaccatatccatttcacagagcagcag
tacttccagagtcctcccctacaaaggcagagtcacagcctcccagaacacagcccggga
cagggcctctctggcgagagagtggggatgaccaggtcaaatggaggtaaagctccagag
agtgagcagaggaggagtgtgaagaaccagctcagcaccctcttcccccacagcatggta
gactatgtgatgagtgtgtacccacacaccctcaatatgtcagagctggtgcctctgatt
cagaggttccgaatcagccacattcctttctaa
DBGET
integrated database retrieval system
