Oncorhynchus kisutch (coho salmon): 109866742
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Entry
109866742 CDS
T09179
Symbol
med23
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23 isoform X6
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oki03021
]
109866742 (med23)
Transcription machinery [BR:
oki03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
109866742 (med23)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
109866742
NCBI-ProteinID:
XP_020311160
Ensembl:
ENSOKIG00005033846
LinkDB
All DBs
Position
LG21:complement(16351063..16379695)
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AA seq
1382 aa
AA seq
DB search
MAISMETQLQSIFEDVVKTEVIEEAFAGMFMDTPEDERTKLISCLGAFRQYWSTLPPDSH
DQCVQWIVRFIHGQHSPKRISFLYDCLAMAVETSLLPPRMVCQALISSDNLEWERTQLWA
LTFRLIRKIIGGVDYKGVRDLLKALLDKIQTIPNTVSSAVVQQLLAAREVVEYILDRNAC
LLPAYFAITEIRKLYPEGMLSHWLLGSLMSDFVDSFRPTARINSICGRCSLLPVVNNSGA
ICNSWKLDPTTLRFPLRGMLPFDKDLFEPQTGLLRYVLEQPYSRDMVCNMLGLNKQTLNI
AQHKQRCPVLEDQLVDLVVYAMERSETEEQFDDGGTSQLLWQHLSSQLIFFVLFQFASFP
HMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNALADFLPVMKLFDLLYPEKECIP
VPDISKPQSTHAFAMTCIWIHLNRKAQNDNSKLQIPIPHSLKLHHEFLQQSLRNKSLGMT
DYKIALLCNAYSTNSECFTLPMGVLVETIYGNGSMRITLPGTNCTASGSVTPLPMNLLDS
LTVHAKMSLIHSIATRVIKLAHAKSSIALAPALVETYSRLLVYMEIESLGIKGFISQLLP
NVFKSHAWGILHTLLEMFSYRMHHIQPHYRVQLLSHLHSLAAVPQTNQNQLHLCVESTAL
RLITALGSSEVQPQFTRFLSDPKTVLSAESEELNRALILTLARATHVTDFFTGSDSIQGT
WCKDILQTIMNFTPHNWASHTLSCFPAPLQAFFKQNNVPQESRFNLKKNVEEEYRKWKSM
TNENDIITHFSMQGSPPLFLCLLWKMLLETDKINQIGFRVLERIGARALVAHVRTFADFL
VYEFSTSAGGQQLNKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLL
LKPNDFRNRVSDFVKENAPEHWLQSDWHTKHMTYHKKYPEKLYFEGLAEQVNPPMQQQSH
YLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLH
YYERHLRDRTNLKRKLVHAIMSSLKDNRAPGWCLSETYIKCGMNPREDNVWIPDDTYYCK
LIGRLVDTMAGKSPGPFPNCDWRFNEFPNPAAHALHVTCVELMALAVPGKDVGNALLSVV
LKSQPLVPRENITAWMNAIGLVITALPEPYWVVLQDRIVSVLGSPCFTTETEWVGYPFAL
LDFTACHQSYSEMYCSYVLALAHAVWHHSSIGQLSLIPKFLSEVLKPIVKTEFQLLYVYH
LVGPFLQRFQQERTRCMLEIGVAFYEMLQAVDQHSQHLSYMDPICDFLYHIKYMFTGDSV
KDQVEKIILTLRPAMKLRLRFITHTSKMEPAAASVPQPSSSVSSPAPQSNPGPSNLPLSG
AQ
NT seq
4149 nt
NT seq
+upstream
nt +downstream
nt
atggcgatttccatggaaacccagctccagagtatattcgaggatgtagtgaaaacagaa
gttattgaggaagcctttgcaggcatgtttatggacacacctgaggatgagagaacaaaa
cttatcagttgtctaggtgcctttcgtcagtattggagcactcttcctccggattcccat
gaccagtgtgtgcagtggattgtccgattcattcatggccagcacagccccaaacggatc
tcttttctctatgactgcctcgccatggcagtggaaaccagtctgttacctcccaggatg
gtgtgtcaggctctcataagctcagataacctggagtgggagcggacacagttatgggcc
ttgacttttcgactcatacgaaagatcatcggtggtgtggattacaagggagttagagat
ctactgaaggctctgctggataagattcagaccatccccaacactgttagctcagctgtg
gtccagcagctgctagctgcacgagaggtggtggagtacatcctcgacaggaacgcgtgc
ctcctgcctgcctactttgccattacagagatcagaaaactctatcctgaggggatgttg
tcacactggcttctgggcagtctcatgtcagattttgttgacagttttcgacccactgca
agaattaactccatctgtgggagatgcagcctccttccagtggtcaataactctggagct
atctgcaactcctggaagctggaccccaccacattacgattccctctcaggggcatgctg
cccttcgacaaggacctgtttgaaccacagacagggctgctgcgatatgtgctggagcag
ccctactctcgagacatggtctgcaacatgttagggctcaacaagcagaccttgaacatt
gctcagcacaagcagcgctgcccggtgctcgaggaccagctggtggacctggtggtatac
gccatggagcgctcagagaccgaggagcaatttgacgacggcggtaccagccagctcctg
tggcagcacctctccagccagctcattttctttgtgctcttccagttcgccagcttccca
cacatggtgctctcgcttcaccagaagctggccggtcgaggtctgatcaaaggccgagac
cacctcatgtgggtcctcctccagttcatatctggcagcattcagaagaacgccctggct
gactttctccctgtcatgaagctgttcgatcttctctacccagagaaagagtgcatcccg
gtgccagacatcagcaagccccagtcgacccacgccttcgccatgacttgcatctggatc
cacttgaaccgcaaggctcagaacgacaactccaagctgcagattcctatcccccactcc
ctcaagctgcaccatgagtttctccagcagagcctgaggaacaagtccctggggatgaca
gactataagatcgccttgctgtgtaatgcctactctactaactctgagtgcttcactctg
cccatgggcgtgcttgtggagactatctatggcaacggcagcatgcgcatcaccctgcct
ggcaccaactgtaccgcatcaggctccgtcacaccactacccatgaacctcctagactcc
ctcaccgtccacgccaagatgagcctgatccatagcatcgccactcgggtgatcaagttg
gcccacgccaagtccagcatcgccctggccccagccctggtggagacctacagcagactg
ctggtctacatggagatagaatctctgggcatcaaaggattcatcagccagctcctgccc
aatgtgttcaagtcccacgcctggggcatccttcacactctgctggagatgttcagctac
cgtatgcaccacatccagccccactaccgcgtccagctgctcagccacctgcactcgcta
gccgccgtgccccagaccaaccagaaccagctacacctctgtgttgagagcacagcatta
aggttgatcacagcgttggggagttctgaggttcagcctcagttcacccgcttcctcagt
gaccccaaaacggtgctgtcagctgaatctgaggagctcaaccgtgccctcatcctgact
ctggccagagccacccacgtcacagatttcttcacaggctccgactccatccagggtacg
tggtgtaaggacatcctgcagaccatcatgaactttactcctcacaactgggcctctcac
accctgagctgtttccctgctcctcttcaggcgttcttcaagcagaacaacgttccccag
gagagccgcttcaacctgaagaagaacgtggaggaggaatacaggaagtggaagagcatg
accaacgagaacgacatcatcacccacttctccatgcagggatcgccgcccctcttcctg
tgtctgctgtggaagatgctgctggagactgacaaaatcaaccagatcggcttcagggtt
ctggagaggatcggggcgcgggcgctggtggcccatgttaggacgtttgcagacttcctg
gtctatgagttctccacgtcggccggtggccagcagctcaacaagtgtatcgagatcctc
aacgacatggtgtggaagtacaacattgtcacgctggacagactcatcctgtgcctggcc
atgaggagtcacgagggtaacgaggcccaggtctgctacttcattattcagctcctcctc
ctcaagcccaacgacttccgcaatcgcgtctctgacttcgtgaaggagaacgcccccgag
cactggctgcagagcgactggcacaccaagcacatgacctaccacaagaaatacccggag
aagctgtactttgagggattggccgagcaggtgaacccgcccatgcagcagcagtcccac
tacctgcccatctactttggtaacgtctgcctgcgcttcctgcccgtctttgacatcgtc
atccaccgtttcctggagctgctgcccgtctccaagtcactggagaccttactggaccac
ctgggaggactctacaagttccacgaccgcccggtgacctacctgtacaacacgctccac
tactacgagcgtcacctgcgcgaccgcaccaacctgaagaggaagctggtgcacgccatc
atgagctctctgaaggacaaccgggcgccaggctggtgcctgagtgagacctacatcaag
tgtggcatgaacccccgcgaagacaacgtctggatccccgatgacacctactactgcaag
ctcattgggcgcctcgtcgacacgatggctggcaagtcccccgggccgttcccgaactgt
gactggaggttcaacgagttccccaacccggccgcccacgctctccacgtcacctgcgtg
gagctgatggccctggcagtgcccggcaaggacgtgggcaacgccctgctcagtgtcgtc
ctcaagagccaaccgctggtgcctcgggagaacatcaccgcctggatgaacgccatcggc
ctggtgatcaccgccttgcctgagccttactgggtggtcctgcaggaccgtatcgtgagt
gtgctgggcagtccgtgcttcaccacagagactgagtgggtgggttaccccttcgcgctg
ctggacttcaccgcctgccaccagtcctactctgagatgtattgcagctacgtgttggcc
ctggcccacgccgtgtggcaccactccagcatcggacagctctccctcatccccaagttc
ctgtctgaggtgctgaagcccatagtaaagacagagttccagctcctctatgtgtaccac
ctagtggggcccttcctccaacgcttccaacaggagaggacccgctgcatgctggagatt
ggagtggcgttctatgagatgctacaagctgtggaccagcacagtcaacacctgtcctac
atggatcctatctgtgacttcctctaccacatcaagtacatgttcaccggggacagcgtc
aaagaccaggtggagaaaatcatcctgaccctgcgtccggccatgaagctccgtctgcgt
ttcatcacccacactagcaagatggagcctgcagccgccagcgttccccagccctcctcc
tctgtgtcctcacccgccccacagagcaaccctggcccctccaacctccccctgtctggg
gcccaataa
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