Oncorhynchus kisutch (coho salmon): 109866802
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Entry
109866802 CDS
T09179
Name
(RefSeq) terminal nucleotidyltransferase 4B isoform X1
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109866802
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109866802
03016 Transfer RNA biogenesis [BR:
oki03016
]
109866802
Enzymes [BR:
oki01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
109866802
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
109866802
Transfer RNA biogenesis [BR:
oki03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
109866802
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
Polbeta
PAP_NTPase
TUTase
Motif
Other DBs
NCBI-GeneID:
109866802
NCBI-ProteinID:
XP_020311231
Ensembl:
ENSOKIG00005039482
LinkDB
All DBs
Position
LG22:complement(44093557..44110865)
Genome browser
AA seq
705 aa
AA seq
DB search
MNSPLSLAAQCSYLYRDSASHANLASVPCMGAWIQYSPGSQPSSAWLKIWITTHGLRNLS
LNNHKNHGSSTLNTPTTKTCSGTTVSVNGVTGNVIQDGVPDGGTSSSEARMQGTINPKGD
NKIEQLSDLLEENINQHPAGKGSSGAGIVGGTAFGSWRGREREYEFGNRRRRDNRASTFG
FNRSLLSISCNSTVDETGCRRVGHTDTPWKTRNYTAGILGLHEEIQDFYAYMSPRPEEEK
MRREVVERIERVIKDLWPTADVQVFGSFSTGLYLPTSDIDLVVFVKFREGDTLPLWRLEE
ALRKHKVVEENSVKVLDKATVPIIKLTDSLTEVKVDISFNMKNAVKAAALIKDYKKKYPV
LPYLVLVLKQFLLQRDMNEVFTGGISSYCLFLVAVSFLQLHSRENACSPNANTGVLLIEF
FELYGRHFNYLKTGIRIKDGGCYLSKDEVQKSMLDGYRPSLLYIEDPLQPGNDVGRSSYG
AMQVKQVFEYAFMVLSHAVSPIAKYHLNNHGESILGRIIRVTQEVAEYRDWITMKWAALS
LNSLTLKGNVTLLVELQEMEECINNLSEEGAESPSSSSPPPSSSFSSPHSSSASSSDADS
DGVCCKPVTSTRGRRGSSAPSAGLTNHRDTSFSSSSHVSQSSKVDRASLMSCQNSNANIQ
PSTGTGQSSGSNSRSHRDRKQSCPGRRRKLQPKRQCKPVVQDLCR
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgaattctcctctttcgttagcagctcagtgtagctacctctatcgtgacagtgccagt
cacgcaaacctagcgagcgtgccgtgcatgggtgcgtggatccaatattctcctggttcc
caacccagcagcgcgtggttgaagatttggataacgactcatggtctgcgcaatttgagt
ttgaataatcataagaaccacggctcttctaccttgaacacgcccaccaccaagacttgt
tctggtacaactgtatcggtgaacggggtcacggggaacgtgattcaggacggagtaccc
gacggtggcacgagcagcagtgaggcgagaatgcaagggacgattaatccgaaaggcgat
aataaaatagaacagctatccgatttattggaggaaaatatcaaccagcatcctgcgggg
aagggcagtagtggtgccgggattgtgggtggcactgcattcggtagctggagaggaaga
gagagggaatacgaatttgggaacagacggaggagagacaaccgagcgagcactttcggt
tttaaccgcagtttattgagtattagctgcaactctacggtggacgaaactggatgccgt
agagttggtcacacggacacgccttggaaaaccagaaactacactgcagggattttgggg
ctccatgaggagatccaggacttctatgcctacatgtctccgcggccagaggaggagaag
atgaggagggaggtggtggagaggatagagagggtcattaaggacctttggcccactgct
gacgttcaagtatttggaagttttagcacgggtctctatctacccactagtgacattgac
ctggtggtgtttgtgaagttcagggaaggagacaccctccctctgtggaggttagaagag
gcgctgaggaaacacaaagtggtggaggagaattctgtcaaagtgctggacaaggccacg
gtgccaatcatcaaactgacagactctctcacggaggtcaaagttgacatcagtttcaac
atgaagaatgctgtcaaagctgctgccctcatcaaagattataaaaagaaatatcctgtg
cttccgtacctggtgctagtcctgaagcagttcttattacaaagagacatgaatgaagtg
tttacaggaggcatcagttcctactgcctcttccttgtcgctgtcagcttcttacagctc
catagcagggagaacgcctgcagtcccaacgccaacactggtgtcctactcatagagttc
tttgagctgtacggccgccattttaactacctgaagacggggatccggatcaaggatggg
ggctgctatctctccaaagacgaggtccagaagagcatgctggatggatacagaccttcc
ctgctctacattgaagacccactgcagccaggtaatgatgtgggccgtagctcatacggt
gccatgcaggtgaagcaggtgtttgaatatgccttcatggtgctgagccacgctgtgtcg
cccatcgctaagtaccacctcaacaaccacggcgagagtatactgggcagaatcatccgg
gtgacccaggaagttgctgaatacagagactggatcaccatgaagtgggctgccctatca
ctgaactccctgaccttaaaaggtaatgtcacgttgctggtggagcttcaggagatggag
gaatgcatcaacaatctctctgaggaaggggcagagtcccccagctcctcctctcctccc
ccctcttcgtcattctcctcgccacattcttcatcagctagctccagtgacgctgattcg
gacggagtctgctgtaaaccggtgacctcgacgcggggtaggcgaggctcatctgcaccc
agtgctggattgaccaatcacagggatacaagtttctcttccagcagccacgtaagccag
tcgagcaaggtggacagagcgagtttgatgtcttgtcagaacagcaatgccaacatacag
ccaagcacaggaacaggacagtcatcaggcagcaacagcaggagccaccgagacagaaag
cagagctgtccaggcaggaggaggaaactccagccaaagcgccaatgtaaacctgtagtg
caggacctctgtagatag
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