Oncorhynchus kisutch (coho salmon): 109866822
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Entry
109866822 CDS
T09179
Name
(RefSeq) transcription factor RFX4-like isoform X1
KO
K09174
regulatory factor X 4
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109866822
Transcription factors [BR:
oki03000
]
Eukaryotic type
Other basic domains
RF-X
109866822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX_DNA_binding
Pox_D5
Clr5
Motif
Other DBs
NCBI-GeneID:
109866822
NCBI-ProteinID:
XP_020311261
Ensembl:
ENSOKIG00005006189
UniProt:
A0A8C7D606
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All DBs
Position
LG22:complement(37779540..37816197)
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AA seq
736 aa
AA seq
DB search
MHCGLLEEPDMDSTESWIERCLNESESKRYSSHTSLGNTSNDENEEKENNRASKPHSTPA
TLQWLEENYEIAEGVCIPRSALYMHYLDFCEKHDTQPVNAASFGKIIRQQFPQLTTRRLG
TRGQSKYHYYGIAVKESSQYYDVMYSKKGAAWVNETGKKEVIKQTVAYSPRSKLGTLLPE
FPNVKDLNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHML
PVLGSSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHD
LPENLRNIKFELSRRFSQVLKRQTSLNHLCQASRTVIHSADITFQMMEDWRNVDLNSITK
QTLYTMEDTWEEHRRLIIDLYQEFDRLLEEQSSIEAYIEWLDSMVDRCVVKVAGKRPGCL
KKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANEL
MRAMKAEGSTAEQEEEMMLTETTPTSTSPGPFSPPKSVTSVGVPAASSPTAAQSPEYTGA
TATTGAVQSYTWSLTYTVTTSGGTPPEGGQQQPCMRSGAPVPPPSSTHRLPVYAHRDEHG
FTGSYNYGSYSNQHPHSIQSQYPSLAHEPGIPAPLPYPAYHRTSAQYPLNSQMSRMEPCL
MGGAPRLHPTPVAPRWADVSPANSCYTSPPMHSSRYAASGDMYSPLAPRRNSEYEHSQHF
PGFAYINGEATTGWAK
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgcattgtgggctgctggaggagcctgatatggattccacagagagctggattgaaaga
tgcctcaacgagagcgagagcaagcggtattccagccacacatccctggggaatacgtcc
aatgacgaaaatgaggagaaagaaaacaacagggcttctaaaccccattcaacaccagct
accctacaatggctggaggagaactatgagattgcagaaggggtttgtatcccccgcagt
gctctctatatgcactacctggacttttgtgagaagcacgacacacagcctgtcaacgcc
gccagctttgggaagattattagacaacagtttccacaactgaccacaagaagactgggc
accaggggccagtcaaagtaccactactatggcatcgctgtgaaggagagctcccagtac
tacgatgtgatgtactccaagaagggtgcggcgtgggtgaacgagacaggcaagaaggag
gtcatcaagcagacagtggcgtattcaccacgctccaaactggggacgctcctgccagag
tttccaaatgtcaaagacttaaatctgcccgccagtctgccagaggagaaggtgtcaacg
ttcatcatgatgtacagaactcactgccagaggatactggacacagtaatacgcgccaac
tttgacgaggtccagagcttcctgctgcacttttggcagggcatgcccccccacatgctc
cctgtcctgggctcctccactgtggtcaacatcgtgggcgtctgtgactccattctttac
aaggcaatctctggggttcttatgcccaccgtcctgcaagcactgcctgatagtttgacc
caggtgatccggaagtttgccaaacagctggacgagtggcttaaagtagcacttcacgac
ctgcctgaaaacctgaggaatatcaaatttgaattatctagaagattttctcaagttctc
aagaggcagacatctttgaaccatctatgtcaggcgtcacggacggtgatccacagtgca
gacatcacctttcagatgatggaggactggcggaacgtggacctgaacagcatcaccaag
cagacactttacaccatggaggacacatgggaggagcaccggcggctcatcatcgacttg
taccaggagtttgaccgtctgctggaggagcagtcttctatagaggcctacatcgagtgg
ctggactccatggtggaccgctgtgttgtcaaggtggcaggaaagaggcccgggtgcctg
aagaaggtggcccaacagttcctgctcatgtggtcgtgcttcgggaccagagtcatccgg
gatatgaccctccacagtgcgcctagcttcggctcgttccacctgatccacctgatgttt
gatgactatgtgctgtacctgctggagtctctgcactgccaggagagggcaaacgagctc
atgagggccatgaaggcagagggtagcacagctgaacaagaggaagagatgatgctgacg
gagaccacgcccacctccacgtccccagggccattttccccaccgaagtctgtcacctca
gttggggtcccagccgccagctcccccaccgctgcccagtccccagagtacacaggggcc
acagccaccacaggcgctgttcagtcatatacctggtcccttacgtacacagtgacaaca
tcaggcggcactcctcccgagggcggacagcagcagccctgcatgcgcagcggtgcaccc
gtgccccctccctcctccacccatcgactaccagtctacgcccacagggacgagcacggg
tttactgggagctataactacgggagctactctaaccagcacccccactccatccagagc
cagtaccccagtctggcccacgaaccaggcatccctgcccccctaccctatcccgcctac
caccgcacctctgcacagtacccgctcaatagccagatgtctcggatggagccatgcttg
atgggaggtgctcctcggctgcaccctacacccgtggccccacggtgggcggatgtctcc
ccagccaacagctgttacaccagtccccctatgcactcctcccgctacgccgcctctgga
gacatgtactcccccctggcccctcgcaggaactctgaatacgaacactcacaacacttt
cccggcttcgcttacataaatggagaggccaccacaggctgggccaagtag
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integrated database retrieval system
