KEGG   Oncorhynchus kisutch (coho salmon): 109866858
Entry
109866858         CDS       T09179                                 
Name
(RefSeq) lissencephaly-1 homolog B
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki00565  Ether lipid metabolism
oki01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:oki00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    109866858
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oki03036]
    109866858
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oki04147]
    109866858
Chromosome and associated proteins [BR:oki03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    109866858
Exosome [BR:oki04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   109866858
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st EIF3I WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_EML_2 Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP Beta-prop_IFT122_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_Vps41 Beta-prop_Nup120_160 Beta-prop_DCAF4 Beta-prop_EML WDR90_beta-prop_4th Beta-prop_SPT8 LisH WD40_RFWD3 LisH_PAC1 Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_WDR35_TULP_N Beta-prop_DCAF12 Nucleoporin_N Beta-prop_NUP159_NUP214 Pox_A_type_inc Beta-prop_WDR11_2nd ARMC9_LisH DUF7800
Other DBs
NCBI-GeneID: 109866858
NCBI-ProteinID: XP_020311321
Ensembl: ENSOKIG00005048720
UniProt: A0A8C7L4P3
LinkDB
Position
LG22:complement(10397599..10431140)
AA seq 410 aa
MVLSQRQRDELNRAIGDYLRSNGYEEAYSTFKKEAELDMNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEMTLGGPVAQKRDPKEWIPRPPERYALSGHRSPVTRVIFHPVF
SVMVTASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMV
RPNQDGSLIASCSNDQTVRVWVATSKECKAELREHEHVVECIAWAPDTAHPTILEATGSE
SKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLVHPGGRFIVSCADDK
TLRIWDYKNKRCMKTLCAHEHFVTSLDMHRTAPYVVTGSVDQTVKVWECR
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggtgctgtcacagagacaacgagatgaactaaaccgagcgataggagactacctccgc
tccaacggctatgaagaagcctattccaccttcaagaaagaggcagagttagatatgaat
gaggagttagataagaagtacgctggtcttttggagaagaaatggacctctgtcatcaga
ttacagaagaaggtgatggagctggagtctaagctgaacgaggccaaggaggagatgact
ctagggggtcctgtggcccagaagagggatcctaaggagtggatcccccgtcccccagag
agatacgccctaagcggccaccgctcccccgtcacacgggtcatcttccacccggtcttc
tctgtcatggtcactgcttctgaggacgccaccatcaaggtgtgggactatgaggcaggg
gactttgagcggacactgaagggtcatacagactctgtccaggacatctcctttgaccag
acgggcaagctgctggcctcctgctctgcagacatgaccatcaagctgtgggacttccag
ggctttgagtgcatccgcaccatgcacggtcatgaccacaacgtgtcttctgtagccatc
atgcccaatggagaccacatagtctctgcctccagagacaagaccatcaagatgtgggag
gtggccactgggtattgtgtgaagacattcacaggccacagagaatgggtgaggatggtc
cggcccaaccaggatggttctcttatcgccagctgttccaacgaccagacggtgcgtgtg
tgggtggccacctccaaggagtgtaaggctgagctgcgggagcacgaacacgtggtggag
tgtattgcctgggcccccgataccgctcaccccactatcctggaggctactggctcagag
agtaagaagagtgggaagcccggcccattccttctctctggctctagagataagaccatc
aagatgtgggacgtcagcactggcatgtgccttatgactctggtgggtcatgataactgg
gtgcgtggtgtgttggtgcaccctggaggcaggttcatagtgagctgtgctgatgataag
actctgaggatctgggactacaagaacaagcgctgcatgaagaccctgtgtgcccacgaa
cactttgttacctctctggatatgcaccggactgctccctacgtggtgacaggcagcgtt
gatcagacagtcaaagtgtgggagtgtcgctga

DBGET integrated database retrieval system