Oncorhynchus kisutch (coho salmon): 109866911
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Entry
109866911 CDS
T09179
Symbol
fanca
Name
(RefSeq) Fanconi anemia group A protein isoform X2
KO
K10888
fanconi anemia group A protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
109866911 (fanca)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oki03400
]
109866911 (fanca)
DNA repair and recombination proteins [BR:
oki03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
109866911 (fanca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fanconi_A_N
FANCA_arcN
FANCA_helical
FANCA_CTD
Motif
Other DBs
NCBI-GeneID:
109866911
NCBI-ProteinID:
XP_020311409
Ensembl:
ENSOKIG00005048887
UniProt:
A0A8C7L8B3
LinkDB
All DBs
Position
LG22:21566104..21593070
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AA seq
1452 aa
AA seq
DB search
MSLGASSMCPTQKRTLSCLLAGRVGKRPKQENVQELQEAAVQLLNRHQNLSDLFLEVGSP
NPCNLICKESSGQQKGASESPSPTIGGSLLVNELRRKAGELGVPVAALSVKMVVERLLDL
TGHIKGDREQVLLNSTQRVQLSVLFQSTRELLSLEAFCSKLFWQEYWRDQKQPMLEVVYH
LHTQNILSLEYMLESENGVRSWLMSELKALCGRTATEEGDGVPQQVLSTVVSVLVRAVFE
ETQDSTAAPCRRLSQVCRSVLDDMLSWVLDTLNCKPTLQSGETTAELWVQMFDASLCGVS
VSPDALHRFFIHSLTHTLTYRPRLKVSDAIAMQREWSFAKTCRLLTSLFRKLAVIFKVEE
LLSHLQQVLETHEVNWQHVLSCLSTLLVYNPNTQPSLKELLSRLLSSAFEGYDLENMITA
FLLARQGALEGPGVFPSYSEWFKMSFGGASSYHGKSKKSLVFLLKFLSDLVPFDPPQYLK
VHILHPPYVAVKHRALLQEYVSLTKTRLADLKVSIEEMGLYEDISGAGTSVQPRCQARQD
VEKAISLFGSTGRISATVMEASIFRRPYFLSRFLPALLTPRVLPVKPDARMNFIDSLKKA
EKIPAAQHSSYIESCQRERQRQQDSKGVSVVNDDDNPQEVLQVQLQEHRALLTEGASDGE
VSAQLARISHTLSIVFPERAEELVSQAVIQLHVDESIFSELHNKVVNMILRSFCQSLLDA
SRISPPNKQSPWASQFVNILLGHRQLLTALLHRMWDLLHNQGVSLSAAHVLGLAAFVVHL
HASQTKCPKVQLCPPLLPGPVSVLEALTTALPCTTQTNMLFCVRFCVAAVCYGLCRSESL
CDQPQQYNPCSLYKKLLYLIPRLMPDMRRLPIEASGESEYVGANKQGEEENCGLWKSVTD
TNTTWRKSAWALWKHAPFCLLVKLPEYQFSFSEWLAAELRVQRSEDALSDPDRQEYQQWA
CQQLYLPSPVDKGGCAGDLKTACSHILNAVMDQKTVCAPTQENTDHRPSEAGTCLPDIFS
RLQEIVYEMELTSRSQRTQDKGHFLLDLISHRCSVTSDLQSISSELCIQQTLHTWNRVIL
ALPAVMLVTVKTGGGKRTLDCETLMEHINQYQRKGCSPAGLLPYHLTAHFLRAVLMASVS
CDCASGEVNKAMSLISLQCPLLLVSAGHWWGRLSPVLVSLWHRLTDGQPLPQQLQVLADC
HLWVCSSKDGVSCPVPSAPPLLLAACLHCVWEGQACGKGIRTSLEMLGQLTEQHSQLLVF
LLFLCVTDLLTTFLTPQRVKGLQRAQELCKDILTVLVDSADWLLLFKTPCSEKGLYQPVA
VVTSDEYTRLMPLAFYSLVPHLNSEILEKTVKAPGFLHTAVLCYSSLIKLFMDGQTPCPV
TEHLTDQMDPSYILTRAQQVLLKTISLTSPTSLSPHQLNQLEALCVDLDPEVAAALVFHL
SSSSLSPELDFL
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctaggtgcgtcaagtatgtgtcccactcagaaaaggacactctcgtgtctgctc
gcagggcgtgttgggaagaggccaaagcaggagaatgtacaggagctgcaggaggcagca
gtccagctgctgaacagacaccagaacctctcagatctgtttctggaggtggggagtcca
aatccttgcaatttaatttgcaaggagtcctctggacagcaaaaaggagccagtgaaagt
ccctcacctacaattgggggttcacttctggtgaatgagttgaggaggaaggctggggag
ctgggggtcccggtggcagccctgtcagtgaagatggtggtagaaagactgttggacctg
accggccatatcaaaggggaccgagagcaagtgttgctcaactccactcaaagggtccag
ctctccgtgcttttccaatcaacccgtgagcttctctctcttgaagccttctgctctaaa
ctcttctggcaggaatactggagggatcagaaacagcccatgctggaggtggtgtaccac
ttacacactcagaatatcctctctctggagtacatgttggaaagtgagaatggggtgagg
tcatggttgatgtctgagttgaaggctctgtgtggtaggacagctactgaggagggagat
ggagtacctcagcaggttctctcaactgtggtatctgtgttggtgcgagctgtttttgag
gaaacacaggactccacagcagcaccttgcaggaggctctcacaggtgtgccgttcagtg
ctggatgacatgctctcctgggtactggatactttgaattgcaagccaaccctgcagtct
ggtgaaacaacagctgaattatgggtacagatgtttgatgcttccttgtgtggtgtgtct
gtatcacctgatgcactgcaccgtttcttcatccactctctcacccacactctcacctac
agacctagactcaaagtatctgatgccattgccatgcaaagagagtggagctttgctaaa
acctgcagactgttgacctccttgtttcgtaagttggcagtgatattcaaggtagaggag
cttctctctcacctgcaacaagtactggagacgcatgaggtcaactggcagcatgtgctc
tcctgtctctccaccctgctggtgtacaatccaaacacccagcctagcctaaaagagctg
ctgtccaggctcctaagctcagcgtttgaggggtatgacttggagaacatgatcactgcc
ttcctcctggcccgtcagggtgcgcttgaagggcctggtgttttcccctcctacagcgag
tggtttaagatgtcttttggcggtgctagcagttaccacggcaaaagtaagaagtctttg
gtgttcctgctaaagttcctgtcggacctggtgccctttgaccccccacagtatctgaag
gtccacatcctccatccaccctacgtggcagtgaaacaccgggccctactgcaggagtat
gtatccctcaccaagaccagactggctgacctgaaggtctcaattgaggagatgggcctt
tatgaggatatctctggagcaggaacctcagtgcagccccggtgtcaggcacgtcaggat
gtggagaaggcaatctcgttgtttgggagcacaggaaggatatctgccactgtcatggag
gccagcattttcagaaggccttatttcctgtctcgtttccttcctgccctcctaacccca
cgtgtgcttcctgtaaagcctgacgccaggatgaatttcatagattctcttaaaaaagcg
gaaaagatcccagctgcccagcactcctcctacatagagtcatgtcagagagagagacag
aggcaacaggacagtaaaggagtctctgtggtgaatgatgatgataacccacaggaggtt
ttacaggtccaactacaggaacatagagccctgctaacagagggggctagtgacggagag
gtgtcagcccagctggccaggatctcccacactctgagtattgtgttccctgaacgtgct
gaggaactggtcagccaggcagtcatccagcttcatgtagatgagtccattttctctgaa
ctgcacaataaagtggtgaacatgatcctgaggagcttctgccagagccttttggacgcc
tccagaataagcccaccaaataaacagagcccctgggcatcccagtttgtcaatatcctg
ctgggacacagacagctgctcactgccctccttcaccgcatgtgggacctgctccacaat
cagggggtatcattgagtgctgcacatgtgcttggactggcagcctttgttgtgcacctt
catgcctcccagaccaagtgccccaaggtgcagctgtgcccacccctgcttcccggccct
gtgtcagtactggaggcactgaccactgctctgccctgcaccacccaaaccaacatgcta
ttctgtgttaggttctgcgtggctgcagtttgctatggtctctgcaggagtgagtcactg
tgtgatcagccgcagcagtataatccctgcagcctctataaaaagctgctgtacctaatt
cccagactaatgccagatatgaggaggttgccaattgaagcgagtggggaatcggagtat
gtaggggcaaacaaacagggtgaggaggagaattgtgggttgtggaagagtgttactgac
acaaatacaacctggaggaagtcagcctgggcactatggaaacacgcccccttttgtctc
ctagtaaaactcccagaataccagttctcattttcagagtggctggcagctgaactccga
gttcagaggagtgaggatgccctgtctgacccagatagacaggagtatcaacagtgggcg
tgtcagcagctatacctgccatctcctgtggacaaggggggctgtgcaggagacttaaag
acagcctgctcccacattctcaacgctgtcatggaccagaagacagtatgtgctccgacc
caggagaacactgatcacagaccctcggaggcaggcacctgtctcccagacattttctcc
agacttcaggagattgtctatgagatggagctcactagtcgctctcaaaggactcaagat
aagggacatttcctattggatctgatttcacatagatgctctgtgacctctgacctgcag
agtatcagcagtgagctttgcattcagcaaacattacatacatggaacagggtgatactg
gcactccctgcagtcatgttggttacagtgaagactggaggagggaagaggactctggac
tgtgagaccctcatggaacatatcaaccagtatcagaggaagggctgttccccagctgga
ctgctgccctaccacctcacagcacacttcttaagagctgtgctcatggccagtgtgagc
tgtgactgtgcatcaggagaagtaaacaaggccatgtccctgatcagtcttcaatgtcca
ctgctcctcgtctctgccgggcactggtggggccgtctctcccctgtattggtgtctctc
tggcatcgcctcactgacggacagcccctgcctcagcagctgcaggtcctggctgattgt
cacttgtgggtctgcagttcaaaggatggagtgtcatgccctgtcccctctgccccgccc
ctgctcctggcagcttgtctgcactgtgtatgggaaggccaggcatgtggcaagggcatc
aggacaagcctggagatgttgggacagctgacagagcagcacagtcagctgctggtgttt
ctgctgttcctctgcgtgactgacctcctcacaacttttctcacgccccagagggtgaag
ggtcttcagagagctcaggaactctgtaaagatatcctgactgtccttgtggactctgct
gactggctgctactattcaagacaccatgctctgaaaaagggctataccagcctgtggcc
gtggtaacatcagatgaatacacaagactgatgcctttggccttttacagcctggtcccc
catcttaactctgagatattggagaaaacagtgaaggccccagggttcctccacactgct
gtgctctgctactcctcccttatcaagctctttatggacggccagactccctgccctgtg
accgagcatctgactgaccagatggacccctcatatattctgactagggcccagcaggtg
cttctgaagactatatctctgacatccccaacctcactgtctccacatcagctgaaccag
ctggaggccttatgtgttgatctggacccggaggtggcagcagctctggtctttcacctc
agctcttccagcctcagcccagagctggacttcctgtga
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integrated database retrieval system
