Oncorhynchus kisutch (coho salmon): 109867084
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Entry
109867084 CDS
T09179
Symbol
polr3b
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2 isoform X1
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03020
RNA polymerase
oki04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109867084 (polr3b)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
109867084 (polr3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oki03021
]
109867084 (polr3b)
Enzymes [BR:
oki01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
109867084 (polr3b)
Transcription machinery [BR:
oki03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
109867084 (polr3b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
MES-3_M
Motif
Other DBs
NCBI-GeneID:
109867084
NCBI-ProteinID:
XP_020311589
Ensembl:
ENSOKIG00005006322
UniProt:
A0A8C7D1E5
LinkDB
All DBs
Position
LG22:complement(37822108..37875594)
Genome browser
AA seq
1132 aa
AA seq
DB search
MEILGEEFGDMTHQQLAAPVNTIEEKWKLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMK
ANEKITSDADPMWYLKYLNIYVGMPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYT
RGSQRIIRNALPIGRMPIMLRSSNCVLTGKTSMEYSKLNECPLDPGGYFIVKGQEKVILI
QEQLSKNRIIVEQDRKGAVGASVTSSTHEKKSRTNMIVKQGRFYLRHNALSEDAPIAIIF
KAMGVESDQEIVQMIGTEEHVMANFSPSLEECQKAQIFTEIQALKYIGNKVRRQRMWGGP
KKTKMEEARELLASLILTHVPVKEFNFRAKCIYLAVMVRRVILAQGENKVDDRDYYGNKR
LELAGQLLSLLFEDLFKKFNSELKKISDQIIPKQRAAQFDIVKHMRQDQITNGMVNAIST
GNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCP
SDTPEGEACGLVKNLALMTHITTDMEDGPIVKLAFNLGVEDVNLLCGEELSYPSVFLVFL
NGNILGVIRDHQRLVYTFRLMRRAGFINEFVSISTNLTDRCVYVSSDGGRLCRPYIIVKK
GQPMVKNKHIEELTQGYRTFEDFLHESLVEYLDVNEENDCQIALYEHMINKDTTHLEIEP
FTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLGYPQKPMVK
TRTIELIDFEKLPAGQNATVAVMSYSGYDIEDALILNKASLDRGFGRCLVYKNAKCTLRR
YTNQTFDKVMGPMLDAATRKPIWRHSILDADGICCPGEKVENKQVLVNKSMPTVTQTPLE
GSAQPGQPQYRDVPVSYKGSTDSYIEKVMISSNADDAFLIKILLRQTRRPEIGDKFSSRH
GQKGVCGLIVPQEDMPFCDSGICPDIIMNPHGYPSRMTVGKLIELLAGKAGVMDGRFHYG
TAFGGSKVKDVCEDLIRYGYNYQGKDYVTSGITGEPIEAYIYFGPVYYQKLKHMVLDKMH
ARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCG
QCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKLARYNE
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggaaatccttggagaggagtttggagatatgactcaccagcagctcgcggctcctgtc
aatactatagaggaaaaatggaaactattgccagcttttttgaaggtgaaaggtctggtg
aaacagcacattgactccttcaactacttcatcaatgtggagataaagaagataatgaaa
gcaaatgaaaagatcacaagtgatgctgatcccatgtggtacctaaagtacctcaatata
tacgttggcatgcctgatgttgaagagagcttcaatgtaaccagaccagtgtctccacac
gagtgtcgtctcagggacatgacttactctgcacccatcacagtggacatcgagtacacc
cgtggcagtcagagaatcatccgcaatgctctgcccatcggaaggatgcccatcatgctg
cgcagctctaactgtgtcctcacggggaagacgtccatggagtactccaaactcaacgag
tgccctctggacccagggggctatttcattgtcaaaggtcaggagaaggtcattctgatc
caggagcagctgtcaaagaaccgcatcattgtggagcaggacaggaagggggcagtagga
gcctctgtgaccagttccacccatgagaagaagagcaggaccaatatgatcgttaagcag
ggacgcttctacctaagacacaacgcactgtcagaggatgcccccattgccattatattc
aaggctatgggtgtggagagtgaccaggagatagtgcagatgattgggacagaggagcac
gtcatggctaacttctcccccagcctggaagagtgccagaaagcccagatcttcactgag
atacaggctctgaaatacattgggaataaggtgcggagacagcgcatgtggggagggcct
aagaagaccaagatggaggaggccagagagctgttggcttccctcatcctcactcatgta
cctgtgaaggagtttaacttccgggccaagtgtatctacctagcggtgatggtgcgcagg
gtgatcctagcccaaggagagaacaaggtggatgaccgagactactatggcaacaagcgc
ctggagttggctggacagctgctgtctctgctgtttgaggatctctttaagaagttcaac
tccgagctgaagaagatctcagaccagatcatccccaagcagcgggcggcacagtttgac
attgtcaaacacatgcgccaggaccagatcaccaacggcatggtcaacgccatctccacc
gggaactggtccctgaagaggtttaagatggaccgtcagggtgtgacccaggtgctgtcc
cgtctctccttcatctctgctctgggcatgatgaccaggatctcctcccagtttgagaag
accaggaaggtcagcggaccccgctccctgcagccctcccagtggggcatgctgtgcccc
tccgacacccctgagggagaggcctgtggtctggtgaagaacctggccctgatgacccac
atcaccacagacatggaggacggccccatcgtcaagctggccttcaacctgggagtggag
gatgtcaacctgctgtgtggagaggagctctcctacccaagtgtcttcctggtcttcctc
aatggtaacatcctgggggtgatccgggaccaccaaaggctggtgtacaccttcagactg
atgcgacgggctggattcatcaacgagtttgtgtccatctccaccaacctaaccgaccgc
tgtgtgtacgtctcctcagatggaggacgcctctgcagaccgtatatcattgtgaagaaa
ggacagccaatggttaagaacaaacacatcgaggagttgacccagggatacagaaccttt
gaggatttcctccatgagagcctggtggagtacctggacgtgaacgaggagaatgactgt
cagatcgccctctatgagcacatgattaataaggatactacacacttggagattgagccc
ttcacactactaggggtctgtgctggtctgatcccctacccccatcacaatcagtccccc
aggaacacataccagtgtgctatgggcaagcaggccatgggtacgattggctataaccag
aggaaccgtatagacactctgatgtacctgctgggataccctcagaagcccatggtcaag
actagaaccatagagctgatagactttgagaagctgcctgcgggccagaacgctacagtg
gctgtgatgagctacagcggctacgacatagaggacgctctgatcctcaacaaggcctct
ctagacagaggatttggaagatgcctggtctacaagaacgctaagtgcacgttgaggcgc
tacaccaaccagacctttgacaaggtgatgggtcctatgctggatgcggccacacgcaag
cccatctggaggcacagtatcctggatgctgacggcatctgctgccctggtgagaaggtg
gagaataagcaggtgctggtgaacaaatccatgcccactgtcacccagacaccactggag
ggcagtgcccagccaggacagccccagtacagagatgtgcccgtcagttacaagggctcc
acagactcctacatcgagaaggtgatgatctcctccaacgcagacgatgctttcctcatc
aagatcctgctgagacagaccaggagaccagagataggagacaagttcagcagtcggcac
ggacagaaaggtgtatgtggccttatcgttcctcaggaggacatgcccttctgtgactcg
ggcatctgccctgatatcatcatgaacccgcacggctacccctccagaatgacggtgggg
aagctgattgagctactggctggtaaagcgggggtgatggacgggaggttccactacggc
acggccttcgggggcagcaaggtaaaggacgtgtgcgaggacctgatccgctatgggtac
aactaccagggcaaggattacgtcacctcgggcatcactggagagccaattgaggcctat
atctactttggacctgtgtattatcagaaactaaagcacatggtgctggacaagatgcac
gccagagcccgcggcccccgagctgtgctcaccagacagcccacggaggggcgctctaga
gacggaggcctacgtctgggggagatggaacgtgactgtctgattggctacggtgccagc
atgttgctgctggagcgcctcatgatttccagtgacgcctttgaggtggacgtgtgcggt
cagtgtggcctgctgggatactccgggtggtgccactactgtaagtcctcctgtcacgtg
tcctcgttacggataccctacgcctgcaaactgctcttccaggagctgcagtccatgaac
atcattccccgcctcaaactggcacgctacaacgagtaa
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integrated database retrieval system
