Oncorhynchus kisutch (coho salmon): 109867124
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Entry
109867124 CDS
T09179
Name
(RefSeq) ELKS/Rab6-interacting/CAST family member 1 isoform X1
KO
K16072
ELKS/RAB6-interacting/CAST family member 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
109867124
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109867124
Membrane trafficking [BR:
oki04131
]
Exocytosis
Others
Others
109867124
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
109867124
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cast
CCDC39
Rod_CreS
RBD-FIP
AAA_13
CCDC18_1st
DUF5798
Motif
Other DBs
NCBI-GeneID:
109867124
NCBI-ProteinID:
XP_020311648
Ensembl:
ENSOKIG00005037252
LinkDB
All DBs
Position
LG22:33069512..33109474
Genome browser
AA seq
1113 aa
AA seq
DB search
MYGSSRSVGRADANHSGGRDGGSSQGSGRSPHLPRSPRMGHRRTNSTGGSGGGPGGAGGK
TLSMENIQSLNAAYATSGPMYLSDNEVAMSDHVNKSGREMTTMGRQRVTYGSRASAGGGG
GVAASTPNIATSAQANAVLPGGMMAGDALAFGDHHMASTVPHSLRQARDNTILDLQAQLK
EVLRENELLRREVEIKESKLSSSMNSIKTFWSPELKKERALRKDEVSKITVWKEQYRVVQ
DETQHLHMTVQALQDELRIQRDLNQLLQQDPASQGRDLALTSEPTEENYRRLHGDHERQA
KELFLLRKTLEEMELRIDTQKQTLGARDESIKKLLEMLQSKGPSAKSSEEDQERTRRLAD
AEMHRHHLESLLDQRDRETTALREELHRRYEGTPESTKTKALQTVIDMKDAKINSLERGL
RDMEEEVIMLKSNGLLSCEERQEEMKQMEVYRSHTKFMKNKMDQVKQDLSRKDTELLGLQ
TKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETTLNKKSKQIQ
EMSEEKGTLNGEIHDLKDMLEVKERKVNVLQKKIENLQEQLRDKEKQMSNLKERVKSLQA
DTSNTDTALTTLEESLAEKERIIERLKEQRDRDDREKTEEIDSNKKELKDLKEKVSLLQG
DLSDRETNLLDLKEHASSLASSGLKKDSKLKTMEISLEQRKEACLKLENQLKRAQNATLE
AKANTELSERITSLEREVTRHREDSGKAQAEVDRLLEILREMENEKNDKDRKINELESQS
TRQTKDQSKKVASLKQKEHVEKSRNAQLVDEAKKREDNISESSQQVKDSLRLKTERIEEL
EEALRESVQITAEREMVLAQEEAARNHQEKQIEELLGAMEKVKQELESMRAKLSSTQQSL
CEKEAHLTTLRAERRKHLEEVLEMKQEALLAAISEKDANIALLELSSSKKKKTQDEVALL
KREKDRLVQQLKQQTQNRMKLMADNYGDDHLKTAPDQTNHKPSPDQMIPPLLSLSENRSK
LKLYIDHLTDLCHDRDPSILSDLTPPAHYHHANSAAWEEELHKLTLEQLELELELCEKES
GELQEYANSVLQQIADYCPDILEQVVNALEESC
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgtacggcagctcccgttccgtgggcagagcggatgccaaccacagcggagggagagat
ggggggagcagccagggttcgggtcgctcccctcatctcccccgttccccacggatgggc
caccgtcgcaccaacagcacggggggcagtggagggggtccaggcggagcggggggtaag
accctctccatggagaacatccagtccctcaatgccgcctatgccacctcaggacccatg
tacctgagcgacaacgaggttgccatgtccgaccacgttaacaagagtggtcgagagatg
accacaatgggtcgacagagggtgacctacgggtcaagagcaagcgcaggagggggtgga
ggggtggcagctagcactcccaacatcgccacatctgcccaggccaacgctgtgctccct
gggggaatgatggcaggtgacgccctggcttttggggatcaccacatggcctccacggtc
cctcactccctgagacaggcccgggacaacaccatactggacctgcaggcccaactcaaa
gaggttctgcgtgagaacgagttgctgcgtcgtgaggtggagattaaggagagcaagctg
agttcctccatgaactccatcaagactttctggagccctgagctgaagaaggagagagcc
ctaaggaaggacgaggtgtccaagatcactgtctggaaggaacagtaccgcgtggtgcag
gatgagacccagcacctccatatgacggtccaggccttgcaggatgaactgaggatacag
agagacctgaaccagctgcttcagcaggaccctgccagccaaggtcgtgacctggccctg
acctctgaacccacggaggagaactaccgtcggctgcacggggaccacgagcgtcaggcc
aaggagctgttcctgctcagaaagaccctggaggagatggagctgaggatagacacccag
aaacagaccctgggcgccagggatgagtccatcaagaagctactggagatgctgcaaagc
aaagggccgtcggctaagtcgtcagaggaagaccaggagagaaccaggagactggctgat
gctgagatgcacagacaccatctagagtccctactggaccagagagacagggagactact
gctctacgagaggagctgcaccgtcgatacgagggaaccccagagtccacaaaaaccaag
gctctacagactgtcatcgacatgaaggatgctaagatcaactctctggagcgaggtctg
agggacatggaggaggaggtgattatgttgaagtccaatggcctgctgagctgtgaggag
agacaagaggagatgaaacagatggaagtctaccgcagccacaccaagtttatgaagaac
aagatggaccaggtgaagcaggacttgtccaggaaggacacagagttgctgggtttgcag
accaagctggagactttgaccaaccagttctctgatagcaagcagcacatcgaggtcctc
aaggagtcgctgaccgctaaagaacaacgagctgccatcctacagacagaggtggatgct
ttgcgtctgcgtctggaggagaaggagaccacactgaacaagaagagtaaacagatccag
gagatgtctgaggagaagggcacgctcaacggagagatccacgacctcaaggacatgctg
gaggtcaaggagcgcaaggtcaacgtcctgcagaagaagattgagaacctgcaggagcag
ctgagagacaaggagaagcaaatgagcaacctgaaggagagagtcaagtctctacaggca
gacacctctaacacagacactgctctcaccacactggaggagtcccttgctgagaaggag
cgtatcatcgagcgtctgaaggagcagagagaccgagacgacagggagaagactgaggag
atcgacagcaacaagaaagagctgaaggatctgaaggagaaagtcagtctgctgcaggga
gatctgtctgacagagagactaacctgttggacctgaaggagcatgcgtcgtccctggct
tcctcagggctgaaaaaagactccaagctgaagactatggagatctctctggagcagagg
aaggaggcgtgtctcaaactggagaaccagctcaagagggcccagaatgcgacgttggag
gccaaagcgaacacagagctgtcggagcgcatcacctccctggagagggaagttacccga
caccgagaggattctgggaaggctcaggcggaggtggaccgactgctggagatcctgaga
gagatggagaatgagaagaatgacaaggaccgcaagatcaatgagctggagagtcagtcc
accagacagaccaaggaccagagtaagaaggtggcatcactgaaacaaaaggagcatgtg
gagaagagtaggaacgcccaacttgtggacgaagccaaaaagagagaggacaatatctcc
gagagctctcaacaggtcaaggactctctacggttgaagacggaacgtatcgaggagtta
gaggaggctctgcgagagagtgttcagatcacagcggagagagagatggtgctggcacag
gaggaggctgccaggaaccaccaggaaaaacagattgaggagctgctgggcgccatggag
aaggtgaaacaggagctggagtccatgagggccaagctgtcatctacccagcagtccctg
tgtgagaaggaggcccatctgaccacgctgagggctgaacgcaggaaacacctggaggag
gtgctggagatgaaacaggaggcgctgctggcagccatcagtgagaaggatgccaacatc
gccctgctggagctgtcatcgtccaagaagaagaagacgcaggatgaggtggctctgctg
aagagagagaaggaccgtctggtacaacagctcaaacagcagactcagaaccgtatgaag
ctaatggcagacaactatggggacgaccacctgaagaccgcccccgaccagaccaatcac
aaaccttctccagatcagatgatcccccctctcctgtccctgagtgaaaatcgcagtaag
ctgaagctctacatcgaccacctgactgacctctgccacgaccgagaccccagcatcctc
agtgacctgaccccgcccgcccactatcaccacgccaactcagcagcctgggaggaggag
ctacacaagttgactctggagcagttggaactggagttggagttgtgtgagaaggagagt
ggggagctgcaggagtatgccaattcagtgctgcagcagatcgctgactactgccctgac
atcctggagcaggtggtcaacgcgctggaggagtcctgctga
DBGET
integrated database retrieval system
