Oncorhynchus kisutch (coho salmon): 109867154
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Entry
109867154 CDS
T09179
Symbol
usb1
Name
(RefSeq) U6 snRNA phosphodiesterase isoform X1
KO
K23093
U6 snRNA phosphodiesterase [EC:3.1.4.-]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oki03041
]
109867154 (usb1)
Spliceosome [BR:
oki03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Other proteins involved in snRNP biogenesis
109867154 (usb1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HVSL
Motif
Other DBs
NCBI-GeneID:
109867154
NCBI-ProteinID:
XP_020311710
Ensembl:
ENSOKIG00005046946
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All DBs
Position
LG22:complement(20836962..20846937)
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AA seq
287 aa
AA seq
DB search
MLVSYSSSSEEETEHLRLGGNVTKRKQSWHKDDNSLRKKHKSEEHTLNASVSVNREEDDS
KSRLPVPGSVLDMFTGEDEDPLTDDSMQHGGRIRSFKHERGNWATYVYFPYIPEEGFLEL
LDEMTEVAASHSFSLTHTDEFHLSLSKTVVLRHHWIQPFIQSLRTGLTHSRRFICLAEKL
KVYSNDEKTRMFLAMEVSTGQAQLLELVKAVDSTMEEFNLDTFYKNPSFHISLAWCVGDC
TEHIRKKCLQELQGLVDSHEDGPFLLRLDCQELRCKAGNKTFSIPLH
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgttagtcagttatagtagcagctctgaagaggagacagaacatttacgattaggaggg
aatgtaacaaaaaggaagcaaagttggcacaaagatgacaactcattgaggaagaagcac
aaatcagaagagcacaccctcaatgcaagtgtatctgtgaatagggaggaagatgactcc
aagtcgagactgcctgttcctggcagtgtgctggacatgttcacgggggaagatgaggac
ccactgactgacgacagcatgcaacatggtggacgaattcgctccttcaaacacgagagg
ggaaactgggccacttacgtgtactttccatacatcccagaggaagggttcttggagctg
cttgatgagatgactgaagtagcagcatcccatagcttctccctcactcatacagatgag
tttcacctcagtttatctaagacagtggttctgaggcatcactggatccagcctttcata
cagtccctcagaacaggcttgacacacagcaggaggttcatttgtttggctgagaagctg
aaggtctactctaatgatgagaaaaccaggatgttcctggctatggaagtctccacagga
caggctcagctactagagcttgtgaaagcagtggacagcactatggaggagttcaacctt
gacactttttacaagaatccttccttccatataagtctggcctggtgtgttggtgactgc
actgaacacattcgcaaaaagtgtctgcaggagttgcagggtctggtcgactcccatgag
gatggaccctttctcttgaggctggattgtcaagagctgcgttgtaaggctgggaacaag
accttttccattccactacactga
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