Oncorhynchus kisutch (coho salmon): 109867212 Help Entry 109867212         CDS       T09179                                  Symbol ighmbp2 Name (RefSeq) DNA-binding protein SMUBP-2   KO K19036   ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3] Organism oki  Oncorhynchus kisutch (coho salmon) Brite KEGG Orthology (KO) [BR:oki00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03009 Ribosome biogenesis [BR:oki03009]     109867212 (ighmbp2)    03012 Translation factors [BR:oki03012]     109867212 (ighmbp2) Enzymes [BR:oki01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      109867212 (ighmbp2)     5.6.2.5  RNA 5'-3' helicase      109867212 (ighmbp2) Ribosome biogenesis [BR:oki03009]  Eukaryotic type   Other ribosome biogenesis factors    109867212 (ighmbp2) Translation factors [BR:oki03012]  Eukaryotic type   Initiation factors    Initiation associated factors     109867212 (ighmbp2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_11 AAA_12 SMUBP-2_HCS1_1B R3H AAA_19 AAA_30 zf-AN1 Viral_helicase1 DEAD UvrD-helicase nSTAND3 AAA_22 ResIII AAA_16 SLFN-g3_helicase Helicase_RecD PIF1 IstB_IS21 AAA_25 ABC_tran T2SSE HEM4 AAA_31 AAA PhoH NPHP3_N DnaB_C AAA_18 ATPase UvrD_C_2 ATPase_2 Flavi_DEAD NTPase_1 MeaB SRP54 Herpes_ori_bp Motif Other DBs NCBI-GeneID:  109867212 NCBI-ProteinID:  XP_031656866 Ensembl:  ENSOKIG00005038644 LinkDB All DBs Position LG22:57120173..57151993 Genome browser AA seq 1023 aa AA seqDB search MEVECFVSKTLELLQEEREAEIEETKLWQENVSLKDLQSKGVCLLKLQIGSQSTGLYGRS LLLLEPRKHMGVSVLPSNNFGPGDIVGLYDLDGCKPSSQLCTGVVTRISQSAVTVACEDS PDGLNLDTDALYNLMKLANDVTYKRMKKALNTLNGYSSGPASDLISVLFGYSEPGSIAQP NDLSFLNSGLDESQRQAVSFALSQREVAVIHGPPGTGKTTTVVEIILQVVKRGQKVLCCA GSNVAVDNLVERLAKAKAKVLRLGHPARLLESIQKHSLDAVLAHSDNTNIIADIRKDIDK AFMGMKKMNDKRDRIHLKREVGELRKELRTREATAIAEVLKRADVVLATNTGANDGGPLK NLPVDHFDWVVIDECAQALESSCWIALLRGRKCILAGDYKQLPPTIKSHTAASKGLSVSL MERLILKYGDSVVRMLTVQYRMNSNIMTWASEQMYQGQLVAHSSVEKHLLKDLPGVASVE ETSTPLLLIDTAGCGLSEMEVTDDQSKGNQGEVDIVELHIKALTEAGVKPKDIAVIAPYN LQVDLLRQRLSARHPDLEIKSVDGFQGREKEAVVLTLVRSNRKGEIGFLAEDRRINVAVT RARRHLALVCDTQTVQTHGFLKTLIDHMTQHGDVRTAFEYLQDIVPQNYTRDHRDTKSNN TKATASSSTSNKQKGRGQAGSKVEPGHKRTSGGNKTQGGEPQTGSDPGTHSQARRSTPTE EEQKLTQIKYLEIKNQVEWFLQDPDQTELRFPSTLNSHDRLLVHQVAEELGLNHESQGEG KDRCITVSRPPTGSNEAGEEEEQQAQEPAAVREEESVTGAPVGQPAAVREEESVTGPPVG QLAADLKTLHLERMRREQKKREQKMEQEKHLDTIRTAGQTQTSKKTKAKGKTKKTKAGAC EIAAAATADDDFDTLIDAVVKAERVCSFVKCKTLVIHLGQLCLFCNRQYCLGHHIPEVHG CGDQARANARMRISKEGVLYAGSGHKDKSVDPNKKAYLHRKLDSKLKDMEKQRKTKPKES DNN NT seq 3072 nt NT seq  +upstreamnt  +downstreamnt atggaggtggaatgctttgtgtccaagaccctagagctccttcaggaggagagagaagca gagatcgaggagaccaagctatggcaggagaatgtctctctgaaagatctccagagtaaa ggcgtttgtctcctgaagctgcagataggaagccagtcaactggcctttatggacgatca ctactccttctggaacccagaaaacacatgggtgtctctgtgctgcctagcaacaacttt ggacccggagacatagtgggtctgtatgacctggatggctgtaagccgtcctcccagctg tgtactggtgtcgtgacccgcatcagtcagtcagctgtcaccgtggcctgtgaggactcg ccggacggactcaacctggacacagacgctctgtacaacctcatgaagctggctaacgat gtcacgtacaaacgcatgaaaaaggccttgaacactctgaatgggtacagcagtggacca gcctcggatttgatcagtgttctctttggctattcagaacctggctctatagcacaacca aatgatctgtctttcctgaacagtggtctggatgagtctcagagacaggcggtgtcgttt gctctgtctcagagagaggtagctgtaatacacgggccaccaggtaccggcaagacaacc actgtggtggaaatcatcctacaagtggtcaaacggggacagaaggtcctgtgctgtgcc ggttctaacgtggccgtggataacctggttgagcgcctggctaaggccaaagctaaggtc ctgagactgggacaccctgcccgcctgctagagtccattcagaaacactcgctagacgcc gtcctcgctcacagtgacaacaccaacatcatcgccgacatacgcaaagacatcgacaaa gcttttatggggatgaagaagatgaatgacaaacgagatcggatccacctgaagagggag gtaggagagctgaggaaagagttgaggaccagggaagctacagccattgctgaggtcctc aaacgtgctgatgttgttctagccactaacacaggtgctaatgatggtggccctctgaag aacctacctgtagaccattttgactgggtggtgatcgatgagtgtgcccaggcgttggag agctcctgctggatcgcactgctccgaggcagaaagtgtatcctggctggagattacaag cagctgccacccaccatcaagtctcacacggctgcatctaaaggcctgtctgtcagcctg atggagaggttgatcctgaagtatggcgactccgtagtcaggatgctgacagtgcagtac cgtatgaacagtaacatcatgacctgggcatcagaacagatgtaccagggtcaactcgtc gcacacagctcagtggagaaacacctgctcaaagatctcccaggagtagccagtgttgaa gagaccagcacccctctcctccttatagacacagcaggctgtggacttagtgagatggag gtgacagacgaccagtccaaaggaaaccaaggtgaggtggacattgtggaactgcacatc aaagcgttgactgaagctggggtgaaacctaaagacatcgctgttattgccccttacaat ctgcaggtggatctcctgcgtcagcgtctctcagcgagacatcctgatctggagatcaag tctgtagacggcttccagggtagagagaaggaggctgtggtgctgaccttggtcagatct aacaggaaaggtgagatagggttcttagctgaagaccggaggatcaacgtggcggtgact cgagccagacgtcacctggccctggtgtgtgacacgcagaccgtccagactcacggcttc ctcaagaccctcatcgatcacatgacccagcacggcgacgtacgcaccgcctttgagtac ctgcaggacattgtgccccagaactacaccagagaccaccgagataccaagtctaacaac actaaagctaccgctagcagctccacctccaacaagcagaagggcagaggccaggctggg agcaaggtggagccaggacacaagaggacctctgggggtaacaagacccagggaggagag ccccagacaggttcagatcccggcacacacagccaagccagacgttccacccccacagag gaggagcagaaactgacgcagataaaatacctggagatcaagaaccaggtggagtggttt ctccaggacccagaccagacggagctacggtttccctcgaccctcaactcccacgaccgc ctgctcgtacaccaggttgcagaggagctgggcctgaaccatgagagccagggagaggga aaggatagatgcatcactgtctccagacccccaacagggtctaacgaggctggggaagaa gaggagcaacaagcccaagaaccagcagccgtccgggaggaagagagtgttacaggggct cctgtagggcaaccggcagccgtccgggaggaagagagtgttacagggcctcctgtaggg caactggcagcagatctcaagactttacatctggaacgaatgagacgggagcagaagaag agggagcagaagatggagcaggagaagcatctagataccatccgtacagcaggacagact cagacttctaagaagaccaaggcaaaaggaaagaccaaaaagaccaaagcgggggcctgt gagatcgctgcggctgcgacagcagatgatgattttgacaccctaatagatgctgtggtg aaggcagaacgcgtctgtagttttgtcaagtgtaaaacgttagtaattcatctgggacaa ctctgtctgttctgcaacagacaatactgcctcggtcaccacatacctgaggtccatggg tgtggagaccaagccagggccaatgccaggatgaggatcagtaaagaaggggttctgtat gctggtagtggacacaaggacaagtctgtagatcctaacaagaaggcctatctacacagg aagctggactccaaactcaaagacatggaaaagcaacggaagaccaaacccaaagagagt gacaataattga

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