KEGG   Oncorhynchus kisutch (coho salmon): 109867266
Entry
109867266         CDS       T09179                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL2-like
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    109867266
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:oki01009]
    109867266
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oki03021]
    109867266
Protein phosphatases and associated proteins [BR:oki01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     109867266
Transcription machinery [BR:oki03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     109867266
    Little elongation complex (LEC)
     109867266
SSDB
Motif
Pfam: ELL Occludin_ELL DUF4351 UBR1-like_wing
Other DBs
NCBI-GeneID: 109867266
NCBI-ProteinID: XP_020311912
Ensembl: ENSOKIG00005010695
UniProt: A0A8C7E0Z0
LinkDB
Position
LG22:29091298..29134404
AA seq 603 aa
MAALRQEHRYGLSCAKINKNVENKTLYHVKLTDTAIRTLEAYQNLKGSLPNQPAICFKGS
QGYIKIPAPSPDASDALRVFSFYLSSDSKDKPQASFDCTHQYVSREGREHLEGQGSIQDK
ITVCATDDSYQMTRERMSQVEKDIMSRSAIEIKPGSTRGKCVKIQRKQGLSSSMDSSSNK
HSPSNKRSGAPSPVALRPLRDRIIHVLALKAYRKPELLLWLERERASPKDKADLGAVLDD
VAKLNPKDHSFTLKDEFYSHVQKDWPGYLEEEKQLIHRLLARKLQPLSSSSQLKSFQSNH
SFHKTPGDSPSQLSPVKTPSLKRPFPSELSDCQTPKKQRLLDHSLPLQSLSNGHLGPIGA
RSSSGPGNTSVQTKTEFERTNNHIQGSPNGLYTRHKLDGSSSIPKLERTEPVPAVPSPKA
PQTEPSICTDQQLANGQHKKKKSKKHKDKEREHLKQDWIENSPDLKQNQEHFNDHEGAKT
PVTRTSPEELPDYFIKYNIITASEQRKQYKEDFCAEYDEYRALHHRIGTITEMFVQLGSK
INTLSPGTQEYKLMEDQILQKYRKYKKKFPGYREEKKRCEYLHQKLSHIKGLILDYDCIQ
APS
NT seq 1812 nt   +upstreamnt  +downstreamnt
atggcagcgctgagacaggagcatcggtatgggctctcctgtgcaaaaatcaacaaaaac
gttgaaaataaaactctgtaccacgtcaagctaactgataccgccattcgaacgcttgaa
gcctaccaaaatcttaagggatccttaccaaatcagccagcaatttgcttcaaggggagc
caggggtacatcaagatccccgccccgtccccagatgcctcggacgcactacgggtcttc
tccttctacctgtctagtgatagcaaggacaaacctcaggccagcttcgactgcacccac
cagtatgtctcaagggagggcagggagcacctggagggccagggaagtattcaggacaag
atcactgtgtgtgccactgatgactcgtaccagatgacccgggagcgcatgtctcaggtg
gagaaggacatcatgagcaggtcggccatcgagatcaagccaggctccactcgtggtaaa
tgtgtgaagatccagaggaagcagggcctgtcgtcaagcatggacagcagcagcaacaag
cactcccccagcaacaagaggagcggggcccccagcccagtggccctccggcccctaaga
gaccgcatcatccacgtcttggccttgaaggcctacaggaagcctgagctgctgctgtgg
ctggagagggagagggccagtcctaaggacaaggctgacctgggagcagtactggacgat
gttgctaaactgaatcccaaagaccacagctttactctgaaggatgagttctacagtcat
gtccagaaggattggcccggttacctagaggaagagaagcagctcatccataggctcctg
gccaggaaactgcagccactgagcagcagtagccagttgaagagtttccagtcaaaccat
tcattccacaaaacccctggggattctccgtcacaactcagcccggtcaaaactccctct
ttgaaacgcccatttccctctgagctatctgattgtcagacccccaagaagcaaagacta
ttagaccacagtttacccctgcagtccctttccaatggacaccttggtcccattggagcc
cgtagctcatctggtccaggcaacaccagtgtacagaccaaaacagagtttgagagaacc
aacaatcacatccagggaagccctaatggtctctacacgcggcacaaactggatggttcc
tccagcattcccaagctggagaggaccgagccggtcccagccgtaccaagccccaaggcc
ccacaaactgagccctccatctgcactgaccagcagctagccaacggccagcacaaaaag
aagaagtccaagaagcacaaagacaaggaacgggagcacttaaaacaagactggatagag
aacagtcccgacctgaagcagaaccaggaacatttcaatgaccatgagggggctaaaaca
cctgtcactcgtacgtcaccggaagagctgcccgactatttcataaagtacaacatcatc
acagcctcagagcaacggaaacagtacaaggaggatttctgtgcggagtatgatgagtac
agggccctgcatcaccggatcggtacaatcacagagatgtttgttcagctgggctcaaag
atcaacactctctcccccggtacacaggaatacaagctcatggaggaccaaatactgcag
aaatacagaaaatataagaagaagtttcctggttaccgagaagagaagaagcgatgcgag
tatctgcatcagaaactgtctcacatcaaaggtctgatcctggactatgactgtatccag
gccccttcatag

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