KEGG   Oncorhynchus kisutch (coho salmon): 109867312
Entry
109867312         CDS       T09179                                 
Symbol
exosc6
Name
(RefSeq) exosome complex component MTR3
  KO
K12587  exosome complex component MTR3
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    109867312 (exosc6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oki03019]
    109867312 (exosc6)
Messenger RNA biogenesis [BR:oki03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     109867312 (exosc6)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 109867312
NCBI-ProteinID: XP_031657067
Ensembl: ENSOKIG00005021748
LinkDB
Position
LG22:24169566..24171158
AA seq 277 aa
MPTDTKRVRGPEVSQSPSLFLCKNAVKKSTASNDARVDGRQRGQVDVRSVFVRCGLISQA
KGSAYIEAGNTKLICCVYGPRETERKDETDMKSGRLITDMRFAPFSCRERGSWIQGSDEK
DLSLMLLESLRPGVCLQKYPRSQIEVNVMVLENDGAVLAHAVTCASMALADAGIEMYDLV
LGCSIRQEGATYLIDPTFLEENGYNLASGSRENLGSLTVAFLPSLNQISGLQSDGEMGED
TLTGDVRTCIEGCFKLYPVIQQALSKAVRRKAPPSES
NT seq 834 nt   +upstreamnt  +downstreamnt
atgccgactgatacaaaaagggtacgtggcccagaagtgtctcaaagtccatctctcttt
ctgtgtaaaaacgcggtaaagaagtccaccgcttccaacgacgccagggtagatggcagg
cagcgtggtcaagtggatgtccgttcagtttttgtccgatgtgggctgataagtcaagcc
aaaggttcagcttacattgaagctgggaacacgaagctcatctgctgtgtgtatggaccc
agagagactgagcgcaaggatgagaccgatatgaaatccggaagactgattactgacatg
agatttgccccattctcttgtcgagagagaggctcgtggattcaaggtagcgatgaaaag
gatctgtcactgatgctgttggagagcctgaggccaggagtgtgcttgcagaagtatcct
cgctctcagattgaagtaaatgtaatggtccttgaaaacgacggcgccgtcctggcacat
gcagtcacctgtgcgtcaatggcgctggcggacgcaggtatagagatgtacgatctggtt
cttggatgctcaatccgtcaggaaggtgccacataccttatcgaccctacctttctggag
gaaaatggatacaacttggcctcaggatccagggagaatttgggaagcctgacagttgca
tttctgcccagtctgaaccagatttctggactacaatcggatggcgagatgggcgaggac
accctgactggggatgtgcgcacatgcattgaggggtgtttcaaactctaccctgtcatt
cagcaagcactgtccaaggcagtacgaagaaaagcaccaccatcagagagctga

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