KEGG   Oncorhynchus kisutch (coho salmon): 109867323
Entry
109867323         CDS       T09179                                 
Name
(RefSeq) la-related protein 1 isoform X1
  KO
K18757  la-related protein 1
Organism
oki  Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:oki00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oki03019]
    109867323
Messenger RNA biogenesis [BR:oki03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     109867323
SSDB
Motif
Pfam: LARP1_HEAT La SGP
Other DBs
NCBI-GeneID: 109867323
NCBI-ProteinID: XP_020312016
Ensembl: ENSOKIG00005006470
LinkDB
Position
LG22:11117127..11206133
AA seq 1112 aa
MATQVEALLPNNHRIKPEENGHASKMIQHGEDCPEKGVKQTCVADEGSNMKTNNSEQCWI
ATSELRSKQAKEESNNQEKDTLDQEMHTTDQTEDCVKCSKNEFAEAPPPKVNPWTKKKNA
VTVVSQNGQSHHEPPPTTGPAKVVKAPNPRPRRGERVGDFGDAMKWPTPGEIATKETQIE
VVNRTVSCPMPVRQVREVGSTRRSPAPKKPVVKKELKEKRDTNEEGKENQNAKSDDSGEE
KNGDEDSQKNSDEDSQKNGQKKKGNKHRWVPLMMEVKSEGPRERSASRNNTRQNEVPRMP
PNRKNDLRDWYRGKSEREWSDDHDEVSSVRSEGAPFRAGFRGRGRGRGRGRGSRGHPDYH
YGYKAYNGKDGAYGQKFGAPVTYYYDNMSSSDLYTVDQGLLKDYVKRQIEYYFSLGNLER
DFFLRKKMDQEGFLSLGLIASFHRVQALTTDVSLIIESLKDSKEVEIIDMKIRRKVEPEK
WPLPGQSMGPDHNQVDLTQLIHCPEFVPRQMPTKQTESAPGSPRSSTPTRGMTRASMQPK
MEQDVSNLKSMPKGLSASLPDLDSESWIEVKKRPKPSPARTKTPSLQQKEDALSPVPKAG
LSLVPSTASAKDEPEELDFMFDEEMEQMDGRRNTFTDWSDEDSDCEIADNDVNKILIVTQ
TPPYLRKHPGGDRTGHHTSRSKLTNELVKVINDGLYYYEADLWDDNYEPEYATIKQEVEN
FKKVHLISREEFDCLTPEPPVDPNQEVPPGPPKPQQIPVDALANKLFGAPEPSTIARSLP
TTVPDSPNYRSARTPRTPRTPHRKDPAMTPRFYPVVKESRPVDAKTPRKRKTRHSSNPPM
ECHVGWVMDSREHRSRTASVSSNASPSEGTPVLGGIGCTPQSLPNFQHPSHELLKENGFT
QHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNRKMYEEFKQLVVEDGKEG
YRYGLECLFRYYSYGLERKFRPNIFKDFQEETMKDYEAGQLYGLEKFWAFLKYSKNKNMG
IDPKLQECLSKFKRLEDFRIDPPMEEGGRKRHSSSGDCRRRHPSQGSSRPHSQTGFGPVR
PGPHQGGCQNQQPEPAPAAQTSATASDAQPPK
NT seq 3339 nt   +upstreamnt  +downstreamnt
atggctactcaggtagaggcgctcctacccaacaatcatcgtattaaaccagaggagaat
gggcatgcgagcaagatgatacagcatggagaggactgtcctgaaaagggggtgaagcag
acatgtgttgccgacgagggtagcaatatgaaaacaaacaactcagaacagtgttggatt
gcaacgagtgagctacgctctaaacaggcaaaagaagagagtaacaatcaagagaaagac
accctggatcaagagatgcacacgactgatcaaacggaagactgtgtgaaatgtagtaaa
aatgagtttgctgaagcacccccgcccaaggtgaacccatggaccaagaaaaagaatgcg
gtgaccgtggtcagccagaatggacaatcacatcatgagccgccaccaacaacaggcccg
gccaaggtggtgaaggccccaaacccccggcctcggagaggagaaagggttggagatttt
ggtgatgctatgaagtggccaacccccggggagattgcaactaaagaaacgcagattgag
gttgtgaatcggactgtgtcatgccccatgcccgtcaggcaggtcagagaagtgggctcc
acacggagatccccagcccccaagaagcctgtggtgaagaaagagttgaaggagaagcgt
gacaccaacgaggagggcaaggagaaccagaatgcgaagtctgacgattctggagaggag
aagaacggcgacgaggactctcagaagaacagcgacgaggactctcagaagaacggacag
aagaagaaaggaaacaagcataggtgggtgccgctgatgatggaggtgaagtctgagggg
cccagagaacgctcggcctcaaggaacaacacccgtcagaacgaggtgcccaggatgccc
cccaacaggaagaacgacctccgagattggtacagagggaagtcagagcgtgaatggagt
gacgaccatgatgaggtgtccagcgtgaggagcgagggtgctcccttccgtgccgggttc
cggggtcgtggcaggggccggggacgaggcagaggctccagaggtcaccctgactaccat
tatggctacaaggcctacaacgggaaggacggtgcctacggacagaagtttggtgctcca
gtgacctattactacgacaacatgagcagcagtgacctgtacacagtggaccagggcctg
ctcaaggactatgtcaaaaggcagattgagtactacttcagccttggcaacctggagcgg
gatttcttcctgcgcaagaagatggaccaggagggcttcctgtcacttggcctgattgcc
agcttccacagggtgcaggccctcaccactgatgtcagcctcattatagagtctttgaag
gacagcaaagaggtggaaatcattgacatgaagatccgtcggaaggtggagcctgagaag
tggccacttcctggccagtccatgggaccggaccacaaccaggtggacctgacccagctc
atccactgccccgagttcgtgccccggcagatgcccactaagcagacagagtctgctcca
gggtctccccggtcctccacgcccaccaggggcatgaccagggcctccatgcagcccaag
atggagcaggacgtgtccaacctgaagagcatgcccaagggactgtcggccagcctgccc
gacctggactctgagtcctggatcgaggtgaagaagagacccaagccctccccggccaga
accaagaccccttcgttgcagcagaaggaagacgctctctccccggtgcccaaggcaggc
ctcagcctcgtcccctccaccgcctcagccaaggatgagcccgaggagctggacttcatg
tttgacgaggagatggagcagatggatggccgcaggaacacatttaccgactggtccgat
gaggactcggactgcgagatcgccgacaatgacgtcaacaagatcctcattgtgacacag
acgccgccctacctgcgcaagcacccagggggtgaccgcacgggccaccacacgtcgcgc
tccaagctgaccaatgagctggtgaaggtgatcaacgacggcctgtactactacgaagca
gatctgtgggatgacaactacgaacccgagtacgccaccatcaagcaagaggtggagaac
ttcaaaaaggttcacctgatcagccgagaggagtttgactgcctgactccagaacccccc
gtcgaccccaaccaggaggtgccccctggacccccaaagccccagcagattcccgtagac
gccttggcgaacaaactgttcggtgcccctgagccttccacaatagcacgctccctcccg
actactgtacctgactcgcccaactaccgcagtgcccggacaccccgcacgcctcgcacc
ccgcaccggaaggaccccgccatgacgccacgtttctaccctgttgtgaaggagagccgg
cccgtcgacgccaagacccccaggaaaaggaagaccaggcacagctccaacccccccatg
gagtgccacgttggctgggtgatggactcgcgggagcaccgatctcgcaccgcctcggtc
agctccaacgccagcccctcagagggtacacctgtattggggggaattggctgcaccccc
cagtcgctccccaatttccagcacccctcccacgagctgctcaaggagaacggcttcacg
caacacgtttatcacaagtaccgtcgacgctgcctaaacgaacgcaagcggttgggcatc
ggccaatcccaggagatgaacacgctgttccgtttctggtcgttcttcctgagggatcac
ttcaacaggaagatgtatgaggagttcaagcagctggtggtggaggacggcaaggaggga
tacaggtacggtttggagtgcctgttcaggtactacagctacggactggaaaggaaattc
aggccaaacattttcaaggacttccaggaggagaccatgaaagattacgaagctggccag
ctgtatgggcttgagaagttttgggcatttcttaaatactccaaaaacaagaacatgggg
atcgaccccaagttgcaggagtgcttgagcaagtttaagcgtctcgaggatttcagaatc
gatcccccgatggaggagggaggtcgcaagagacactcatccagcggagactgtcgccgc
cgccacccctcccagggctccagccgcccccacagccaaactggcttcggccccgttcgc
ccagggccccaccagggaggatgccaaaatcagcaaccagagccagcgcccgcagcccag
acctcggcaaccgcatcagacgcccagccaccaaagtaa

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