Oncorhynchus kisutch (coho salmon): 109867334
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Entry
109867334 CDS
T09179
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04137
Mitophagy - animal
oki04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109867334
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
109867334
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109867334
Enzymes [BR:
oki01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
109867334
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109867334
Multi subunit type E3
ERAD complex
109867334
LMBR1L-GP78-UBAC2 complex
109867334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
G2BR
zf-C3HC4_2
zf-C3HC4
CUE
zf-C3HC4_3
zf-RING_11
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-RING_16
zf-RING_5
Prok-RING_4
zf_RING_Vps8
RING_XB3-XBAT31
zf-C3HC4_4
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
109867334
NCBI-ProteinID:
XP_020312034
Ensembl:
ENSOKIG00005037562
LinkDB
All DBs
Position
LG22:complement(43669727..43684511)
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AA seq
630 aa
AA seq
DB search
MPLLFLERFPWPSLQTYTALSAVFLAGSILSGYCTVPEPVEYTQTQSSSPVESDDVDEDP
ITSLTDVAATVRLYLVSDTVFVWVMVNTACCVLMLIAKVIQCIVFGPLRVSEKQHLKDKF
WNFIFYKFIFIFGVLNVQTVEEVVMWCLWFAVLVFMHLMVQLCKDRFEYLAFSPTTPMDS
HVRVLTLLVGMLLTCCGLALLCGLLGNPHGVHTVTFMAAECMLVSVRTGHVIIRYFIHLW
DLNHEGTWESKGSYVYYTDFVMELALLGLDLMHHIHMLLFGNIWLSMASLVIFMQLRYLF
HEVQKRIRRHKNYLRVINNMEARFAVATSDELVANNDDCAICWDSMLTARKLPCGHLFHN
SCLRSWLEQDTSCPTCRMSLNISEGAGGEREERQREPMLEDNMGPGGPGPDARQHLNQHN
HFFHFDGSRIASWLPSFSVEVMHTTNILGIVQQANNSQLNAMAHQIGEMFPEVPYHLVLQ
DLQLTHSVEVTTDNILDGRIVVPFPIQPVDHSASQVNPSPQDVGGASGSSEFVTPEVEDF
EVRGSRFSKSAEERQKILLQRKDELLLRAQRRYLSKSPEENAAAMNDDDEYDEGLPSLED
DIPAGSVLDSMTLRRRKLAAAAERRMHTYQ
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgcctttgctgtttttggagagatttccatggcccagtttgcagacatacacagctctg
agtgctgtatttctcgctgggtcaatattgagtggctactgtactgtcccagagccagta
gagtacacacagacacagagcagttctcctgtagaaagtgatgatgttgatgaggaccca
atcaccagccttaccgatgtggcagccactgtccggttgtacctggtctcagacactgtt
tttgtttgggtgatggtgaatacagcctgctgtgtcctgatgctgattgcaaaggtgatc
cagtgcattgtctttgggccactccgtgtcagtgaaaaacagcacctaaaggacaagttc
tggaacttcatcttctacaagtttatcttcatcttcggggtgctcaacgttcagacggtg
gaggaggtggtgatgtggtgtctgtggtttgctgtcctcgtcttcatgcacctcatggtc
cagctctgcaaggaccgctttgaatatctggcattctcacccaccactcctatggacagc
catgtgagggttctgaccctgctggtgggtatgctgctgacctgctgtggcttggctctg
ctctgtgggctcctgggaaacccccacggcgtacacaccgtcaccttcatggccgctgag
tgtatgctggtgtccgttagaactggacatgtcattatccggtactttatccacctgtgg
gacttgaaccatgagggcacctgggagagtaaaggatcctacgtttactacactgacttt
gtgatggagctggcgctgctggggctggaccttatgcaccacatccacatgctgctgttt
ggtaacatctggctctctatggccagcctggtgattttcatgcagctgcgttacctgttc
catgaggtgcagaagagaatccgtcgccacaagaactacctccgtgtcatcaacaacatg
gaggccaggtttgctgtggccacctctgatgagctggtagcgaacaatgatgactgtgct
atctgctgggactccatgttgacagcacgcaagctgccctgtggacatctcttccacaac
tcttgcctgcgttcctggttggagcaggacacgtcgtgtcccacatgccgtatgtctctg
aacatcagcgagggggctggaggagagagagaggagaggcagagggagcccatgctggaa
gacaacatgggccctggaggccccgggccagatgcaaggcaacacctcaaccaacacaac
cacttcttccactttgatggttctcgcattgccagctggctgcccagtttctctgtggaa
gtgatgcacacaaccaacatcctgggaatcgtacaacaggccaacaactcccagctcaat
gccatggcccatcaaatcggggagatgtttccggaggttccctaccatcttgtgctgcag
gatctgcagctgacccactctgtagaggtcaccactgacaacatcctggacggacgcatc
gtggttcctttccccatacagcctgtggatcactctgcctcccaggtcaacccctcccca
caagatgtgggtggggccagcgggagttcagagttcgtgacccccgaggtggaggacttt
gaggtcagaggcagccgcttctccaagtcagccgaggagagacagaagatactgctacag
aggaaagatgagctactgctacgagcacagaggagatatctgagcaagagcccagaggaa
aacgctgctgctatgaacgacgacgatgagtacgatgaaggtctgccctctcttgaggat
gacatcccagcaggttcagttttagactctatgaccctgcgacgcagaaagttagcggca
gctgctgagcgccgcatgcacacttaccagtga
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