Oncorhynchus kisutch (coho salmon): 109867369
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Entry
109867369 CDS
T09179
Name
(RefSeq) beta-hexosaminidase subunit alpha isoform X1
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki00511
Other glycan degradation
oki00513
Various types of N-glycan biosynthesis
oki00520
Amino sugar and nucleotide sugar metabolism
oki00531
Glycosaminoglycan degradation
oki00600
Sphingolipid metabolism
oki00603
Glycosphingolipid biosynthesis - globo and isoglobo series
oki00604
Glycosphingolipid biosynthesis - ganglio series
oki01100
Metabolic pathways
oki04142
Lysosome
Module
oki_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
109867369
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
109867369
00513 Various types of N-glycan biosynthesis
109867369
00531 Glycosaminoglycan degradation
109867369
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
109867369
00604 Glycosphingolipid biosynthesis - ganglio series
109867369
00511 Other glycan degradation
109867369
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
109867369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
oki03110
]
109867369
Enzymes [BR:
oki01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
109867369
Chaperones and folding catalysts [BR:
oki03110
]
Intramolecular chaperones
Others
109867369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Motif
Other DBs
NCBI-GeneID:
109867369
NCBI-ProteinID:
XP_031657696
Ensembl:
ENSOKIG00005039756
LinkDB
All DBs
Position
LG22:57947296..58001547
Genome browser
AA seq
539 aa
AA seq
DB search
MEEKTISNSRRCYKQWLCFMVLFMSFSVIYVDAVWPMPQMISSSMARYTLNPREFIFQYS
SGSSAQPGCSLLDSAFERYFPLIFTDYRAARPRQHNEWFRFPFTVVVHVERAECEGYPDA
DSSESYKLSVCSGQAALRAETVWGALRGLESFSQLVYQDDFGEYFVNETEIEDFPRFQFR
GILLDTSRHYLPLHAILKTLDAMSYNKFNVFHWHIVDDPSFPYQSSTFPDLSSKGAFHPS
THVYTQIDVKRVIAHARLRGIRVLAEFDSPGHTQSWGKGQPGLLTPCYKGTVPSGTFGPV
NPANSSSYKFMTHLFKEVTSVFPDSYVHLGGDEVDFTCWKSNPDVRGFMLKMGFGTDYTK
LESYYMENMVNITKGLNKTAIVWQDVFDYHEKIPVDTVLHIWKGSPGQIQQELSSITLAG
YRVILAAPWYINHIDYGQDWEKYYTIQPLNFTGTEQQKKLVIGGEVCMWGEYVDATNLSP
RLWPRASAAGERLWSDEKMTSSVIDAFPRLVDFRCRLLRRGIQAEPLFVGHCRHEYQGI
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggaagagaaaactatctccaactccaggcgttgttataaacaatggctttgtttcatg
gttttgttcatgtccttctctgtaatctacgtggatgcggtgtggccgatgcctcagatg
atcagctcttccatggcccgatacacactaaatccacgggagtttatttttcagtactct
agtggatcatccgctcaacccggttgttctcttctggactcggctttcgagagatacttc
ccgctcatcttcacggattatagggcagccagacccagacagcacaatgaatggtttagg
ttccctttcaccgttgtggtccatgtggagagagcagaatgtgagggctatccagacgca
gactcttcagaaagctacaagctgagtgtgtgttcgggccaggcagcactgagggctgag
acggtatggggagcactcagaggtttggagtcattcagtcagctggtctaccaagatgac
tttggggagtattttgtgaatgagactgagatagaagactttccccgcttccagttccga
gggatattattggatacgtcacgtcactaccttcctttacacgctattctgaagaccctg
gatgcgatgtcctacaacaagttcaatgttttccactggcacatcgtggacgacccctcc
ttcccctaccagagtagcaccttccctgacctcagcagcaagggggcgttccatccgtcg
acccatgtgtacacccagatagacgtgaagagggttatcgcccacgccagactcagaggc
atcagggtcctggctgaatttgactccccgggacacacccagtcatggggcaaaggacag
cccggtctcctgaccccctgctataaaggcacagttccctctgggacgttcggtccagtg
aacccagccaactcctccagctacaagttcatgacccacctgtttaaagaggtcacctca
gtgtttcctgactcttacgtccatctgggaggggacgaggtagacttcacctgctggaag
tccaaccctgatgtccgaggcttcatgctgaagatggggtttggaactgactacacaaaa
ctggaatcctactacatggaaaatatggtgaacattactaagggactcaacaagacagcc
atagtctggcaggacgtgtttgactaccatgaaaaaatcccagtagacacggtgctccac
atctggaaggggagccctggtcagatacaacaggagctgagtagcatcaccctggctggg
tacagggtcatactggctgccccctggtacatcaaccacatcgactacggacaggactgg
gaaaaatactacaccatacagccactcaacttcactggtacagagcagcagaagaaactg
gtgattggtggagaggtgtgcatgtggggagagtatgttgatgctaccaacctctctcct
cgtctctggccgagggcgagtgctgctggagagcgattgtggagtgatgagaagatgacc
tccagtgtgatcgacgccttccctcgcctcgtggacttccgctgcaggctactgaggcgc
ggtatccaggcagagcctctgtttgtgggtcactgcagacatgagtatcagggtatatga
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