Oncorhynchus kisutch (coho salmon): 109867431
Help
Entry
109867431 CDS
T09179
Name
(RefSeq) Bardet-Biedl syndrome 4 protein isoform X1
KO
K16531
Bardet-Biedl syndrome 4 protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oki03036
]
109867431
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oki03037
]
109867431
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
109867431
Cilium and associated proteins [BR:
oki03037
]
Primary cilia and associated proteins
BBSome
109867431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_11
TPR_19
TPR_14
TPR_12
ANAPC3
TPR_16
TPR_17
TPR_CcmH_CycH
TPR_9
TPR_6
TPR_Slam
ARM_TT21_2nd
TPR_7
TPR_15
TPR_10
Wzy_C_2
NatA_aux_su
ARM_TT21_N
ARM_TT21_4th
TPR_20
ARM_TT21_C
TPR_MalT
PknG_TPR
HrpB1_HrpK
DUF2989
Clathrin
Motif
Other DBs
NCBI-GeneID:
109867431
NCBI-ProteinID:
XP_020312180
Ensembl:
ENSOKIG00005042868
UniProt:
A0A8C7K5J4
LinkDB
All DBs
Position
LG22:complement(7941536..7959251)
Genome browser
AA seq
526 aa
AA seq
DB search
MADDNPVADVQLPPASEIRKPRPKKAPELPILERRNWLIHLHYIRKDYETCKSIIKEQLQ
ETGGMCEYAVYVQALILRLEGKIQQSLDLFQSCAILNPGSSDNLKQVARSLFLLGKHKAA
IEVYNEASQLNEKDWEISHNLGVCYIYTKDFNHAEEQLNIALELSKHDLTYMMLGKIHLL
EGDTDKAIDVYRSAVEFSPENTDLLTTLGLLYMQQGKYQKAFEHLGNALTYDPNNFKAIL
AAGSMMQTHGDYDVAMNKYRVAAYAVPESSPLWNNIGMCFFGNKKYVAAISCLKRANYLS
PFDWKILYNLGLVHLTMQQYASAFHFLSAAVNLQPKMAELYMLLAVALTNMDDGENAKRS
YEQAVLLDDCNPLINLNFAVLLYNQGDKKGATDQYLEMESKVMESSHNAEFDPELIEMAQ
KLASALQVGETSVWTKPGKDSKVSQRSKTTSLQPLGTNQALGQAMSSAASKSIQLAAGSK
APPKSTSTPLDEEHDVENAPSPPLGDPESEDPKAKEKKSKSKPVAE
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgacaatcccgtagcggatgttcaactgcctccagcttctgaaatcaggaag
cctcgtcctaaaaaagcgcctgagctccctattttggagagaagaaactggctcatccac
cttcactacatccgtaaagactatgagacctgtaagtcaatcatcaaagagcagctacaa
gaaaccggggggatgtgtgaatatgccgtctatgtacaagctttaatccttcgcctggaa
gggaaaatccagcagtcactggacctgttccagagctgtgcaatactcaaccctggcagc
tcggataacctcaaacaagtggccagatccctatttctccttggtaagcataaggctgcc
atagaggtttacaatgaggcttcacagctcaatgagaaagactgggagatcagccacaac
ttaggtgtgtgctacatctataccaaagacttcaaccatgcagaagagcagttgaacatc
gccctggagttgagtaagcacgacctgacctacatgatgctgggaaagattcacctgctg
gaaggggacactgataaagccatcgacgtgtacagaagtgctgttgagttttctcctgaa
aacacggatcttctcaccactcttggcctgctatacatgcaacaaggcaaatatcagaaa
gcctttgaacaccttgggaatgccctgacgtatgaccccaacaactttaaggccatcctg
gcagctggcagcatgatgcagacgcatggggactatgatgttgccatgaataagtaccgc
gtggcagcttatgctgtacctgagagctcacccctctggaataacattggcatgtgcttc
ttcggaaacaagaaatatgtggcggccatcagctgtctgaagagggccaactacctgtct
ccgtttgactggaaaatcctgtacaacctgggcctggtacatctcaccatgcaacagtat
gcctcagccttccacttcctcagtgctgccgtcaacctgcagccaaagatggcagagctc
tatatgctgctggcagttgcacttactaatatggatgacggggagaatgccaagcgatca
tacgagcaagcagtgttgttggatgactgtaaccccttgatcaatctgaatttcgcagtc
ctgttgtacaatcaaggagacaaaaaaggagccacagatcagtacctggagatggagagt
aaagtgatggaaagcagccataatgcagaatttgacccagagctcattgagatggcccag
aagttggcatctgctctccaggtgggagagacctcggtgtggaccaagccaggtaaggac
tccaaagtcagtcagcgctccaagaccacgtccctgcagccccttggcaccaaccaggcc
cttgggcaggccatgtcttcagctgccagcaaaagcatccagctagctgcaggctctaag
gctccacccaagtccacctccacgccgctagatgaagagcatgatgtggagaatgcccct
tcccctcccctaggggaccctgagtcagaggatcccaaagccaaagagaagaagagcaag
tctaaacctgtggctgagtag
DBGET
integrated database retrieval system
