Oncorhynchus kisutch (coho salmon): 109867445
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Entry
109867445 CDS
T09179
Symbol
cspg4
Name
(RefSeq) chondroitin sulfate proteoglycan 4
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
oki00535
]
109867445 (cspg4)
04091 Lectins [BR:
oki04091
]
109867445 (cspg4)
Proteoglycans [BR:
oki00535
]
Cell surface proteoglycans
Others
109867445 (cspg4)
Lectins [BR:
oki04091
]
C-Type lectins
Others
109867445 (cspg4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
DUF5562
Motif
Other DBs
NCBI-GeneID:
109867445
NCBI-ProteinID:
XP_020312202
Ensembl:
ENSOKIG00005048660
LinkDB
All DBs
Position
LG22:complement(8809471..8908523)
Genome browser
AA seq
2334 aa
AA seq
DB search
MRALRLVLLSAFLPLLCLPSPSHGASYFGDSFCKITSIQDVSSFHLSLQFKTSRRSGLLL
LAAGMQDYLFLELQNGKLQVRMNLGAGEMVLSSSLGLQLNNLLEHKVSITMQEAKLTMLI
DDLFSTFISVPETQEDLNIDMGVYMGGTGDLDAPYLSNAIPPFRGCMTNVKLESHQFDIL
HSEPIDCHDTKESCSSEFEVGDGEATSFISPDSFVSFPTWSGASGSERTLEFLMKTTIED
ALLTFHPGRESDFIAVGVVGGYLKGVVDFGSGIVVLDNPRVQLDDDQWHRIRVTVDASVF
EINVDSQPASLSLRGSEQLDLVGNLYMGGIQGKMKDVFRDSSLSRMEEVITSESFIGCMG
EIKVNQKERSLQDALVTKDVHVKCEGEDYDYSSYYDSEATTTTAPVRIRYVNADPNKIHC
YPTDDTPEAFRNITKLIEVNPLLVPEGGEAFLDINNLSPTFNLNTVGIRQSQIIFTLQND
PWYGLVDMNINTRRTKKFTLLDVVNKKIKYLHDGNEKYGDQIQLEVFAHSNSYLPGCLKS
PHQYILPVEIIPVNDTPQLSGGNISITENGRTRLNPNLIKIVDSDTRCEELIVTVTSEPP
KGVGYLENAQQPGRSIKEFTCRQLKDGNIYFVHRTGSGGITLQVSDGQSISHSTTFKLSI
TPPQMSLVTNTGLLLSQGSNSSIGIQNLAVIATPRNGDIVFNVTQALRYGELHVLTRNGL
LKQVTSFHQSDLEQDRLRYVSTVSSDLEDVVSDHFQFDVHLGQFSLWNNTFLIKITPSQV
KMAQVVPLEIEGKVEQKAIQHTDLEAEVKGKSVAPETIRYILLKAPTLGTLQMIGRKLVE
GDSFTQQDLWNAQVSYRVQVQRAVANEDQFQFRVFAENQYSPMYTYPIKIQADSDAPVLT
NERLIVLEGGENILNKDYLWVQTSISTNFVYRVTQDPKYGRLIRESPSGQPRFDGAIRMF
SNEDLNLDRLIYQHDGSESSDDEFSFLVFEQAAGSENIRIDGQESMSSMFRISIQSKNDH
VPLRVVDKTFNVVRNGQRLLTTEDILFRDNDSGFNDTQLVFVRTGILSGNIVSPSDPSQP
LFRFTQADVKDQNVLFVHHGADRERFQLQVSDGLHKTTALLQIQAGEAYLRVVNNTMVVM
DHGSTKTLNTSLLSAESNMDIRDASDIRYQVTSPPSDGKIIVSGIEASWFTQEDLKKGVV
SYEHNDQSLSSKDSFGFTVEAKGYSEEGTFRIKIFKQGYLSEPVVITNEVIISYEGEHTV
INQDHLKVEQADILPSEMVFTIKEPPRLGHVVMLTNDSDSTAAPSLDYIHSFTQEDVNRG
RILYVSASIQGSDAFAADVSNGFTTVDDLRMMVDIVPRLIPIQALNFSVREGGGMALTTE
LLNISHPFYSAVNVDFVVEEPPQHGGIRYLDGDEQELTFFTWEEVKLGHIYYLHDSTESG
EDNFTLSASAYEIERRSLPVTFTVTVFPVNDEAPKLTCNTGLEVLAGEESDITTSMLNTE
DADTPINELVYSIESTINGLVALKVEPDEEIQNFTQAQINNGEVIFIHEGLESGGFSFTV
TDGEHTSPLYRFVVTARQLTITMETGEELKIFPGTRHAITSAILKAVTNEDGDEISFSLV
RPPRLGRLILANDRNQFEEITRFSQSDLESGAVFYEHQMPEEPFWVVRDSVELLLSSPPA
PAVHHVLPITVSYSAASDNISSQLWKNRGLDIVQGQRKVIDSSILDASNLLASLPEAERG
PLDVVFEVRRFPAHGRVTLGGLNLPQGAPYFMQEDVAQGELEYLHDDSGASVDSFSFRAR
LNSQGRGTLPPSPAQAVVLEEVFNISIRRRDSSPPELVSLDVLLEVLQGSMTVITQKYLN
TRDEDSTPDEVRFTVSKAPTNGRLVDATKGDHISMFTQEAVNKGQVGFVSDGSLSDGFIE
FTVSDGKHHTEPHTLHVGVLARTLVLAKAPEIQVLQGDDETLLTEEMLRATTGGPNEEEV
LYKITSVPKYAAVMVDRQPTSAFTQTQIREGRVSVRFIKSTSPRDSVAFVARSRAANVSS
VLNITVKPLANIPQGLLLPRGATVLLDKKLLDATPLANKTRTSPTFSIIQQPQGARFVRA
GGRGPEGDGQPVDTFTQKELDEGRVAMEILNGTGGSQAQDVARFLLKAHGVPPAECVLSF
KTTPYNASAVYPATLLKVPGGSAWPNSNDLPGGAGSPRITPASPRWRGNMDWPHGGDAPT
TAYTDKDSHRKPVVSRRNNLWSILIPILILLLLLLLVAILAFYLVRRNKTGKHNVQTVAG
SKPKNGEISQETFRKTDPANNIPMSQMDSKDADPELLQHCRTTNPELKKNQYWV
NT seq
7005 nt
NT seq
+upstream
nt +downstream
nt
atgagagccctgcgtttggtcctgctgagtgccttcttgcccctgctctgtctgcccagc
cccagccatggagcatcctacttcggggacagtttctgcaagataacttcaatccaagat
gtctcctcctttcacctgtcgctgcagttcaagaccagccgacgaagtggactcctcctc
ctggctgcagggatgcaggactacctatttctggaactccaaaatgggaaattacaggtg
cgaatgaaccttggggccggtgagatggtgctatcatcatctctggggctgcaactgaac
aacctcctggagcacaaggtgtctatcacgatgcaggaggccaaactgaccatgctgata
gatgatctcttttccactttcatctctgtgcctgaaacccaggaggacctcaacattgac
atgggggtttacatggggggaaccggagacttagacgccccatatctcagcaatgccata
cctccattccgcggctgcatgaccaatgtcaagttggagtcccatcagtttgatattctc
cactccgagcccattgactgccatgatacaaaggagtcctgtagcagtgagtttgaggtt
ggtgatggagaggcgaccagctttatcagcccagactcatttgtgtccttccctacttgg
agcggggctagtggtagtgaaaggaccttggagtttctcatgaagaccaccatcgaggat
gccctactcaccttccaccctggacgagaatcagactttatagctgttggcgttgtgggc
ggttacctaaaaggtgtggtggactttgggagtgggattgtggtactggacaaccccaga
gtacagctagatgatgatcagtggcataggatcagagtcactgtagatgcgagtgtgttt
gagattaacgtggacagccagcctgcctctctctctctaaggggctcagagcaattggat
ctagttggcaatctgtatatgggggggatccagggcaagatgaaggatgtgtttcgtgat
agtagcttgtctcgtatggaggaggtaataacatctgagtcttttatcggatgcatggga
gaaatcaaagtgaaccagaaggagagaagcctgcaggacgcgttggtcaccaaagacgtc
catgtgaaatgcgagggagaggactatgactactcaagttactatgattctgaggcaacc
acaactacggctcctgttcggatccgatatgtcaacgctgaccctaataaaatacattgc
tacccaactgacgacacaccagaggccttccggaacattacaaaacttattgaagtcaac
cctttgcttgtgcccgagggtggggaagcttttctcgatattaacaaccttagccctaca
tttaacctaaacactgtgggaatccgccaatcccagatcattttcactctacaaaatgac
ccttggtacggactcgtagatatgaacatcaataccagacgtaccaaaaagtttacactc
ctggacgtggtcaacaagaaaatcaagtatctccacgacggcaatgaaaagtatggcgat
cagatccagttggaggtgtttgcccatagtaacagttaccttccaggatgtcttaaaagt
ccccaccagtacattctcccagtggagatcatacctgtcaatgacacaccacaactaagc
ggaggaaacatttccatcacagaaaacggtcgcactcgcttaaatcccaaccttatcaag
attgtggattcggacactcgctgtgaggaattgattgttaccgtgacctcagaacctccc
aaaggggttggctacttagaaaatgcccagcaaccaggaagaagtatcaaagagttcaca
tgcaggcagttgaaagacggcaatatatattttgtccacagaactgggagcggtgggata
actctacaggtatctgacggacaatccataagtcattcgaccacttttaaactgtccatt
acaccgccccaaatgagccttgtgaccaatactggccttctgttgtctcagggaagcaac
tcttccattgggatccagaacctggccgtcattgccacccctcgtaatggagatattgtg
tttaatgtcacacaggctctgagatatggtgaattgcatgttctcactcgcaatggtttg
ctcaaacaggtgacatcttttcaccagtcagatttggaacaagatcgcttgagatatgtt
agcacagtttcaagtgacctggaggacgttgtgtcagatcattttcaatttgatgtccat
cttggacagttttccctatggaacaatacttttttgatcaagatcacaccctcccaggtt
aaaatggcccaagtagttccccttgagattgaaggcaaggtagagcaaaaggcaatacag
cacactgatcttgaagcagaagtgaagggaaaaagtgtagccccagaaactataagatac
atccttctgaaggcccccacactgggtactcttcaaatgattggcaggaagctagttgag
ggagacagtttcacccaacaggacctctggaatgcccaggtcagctatagagtccaggtg
caaagggcggtggctaatgaggaccagttccagttcagagtctttgcagagaatcagtac
tcccctatgtatacctacccaatcaagatccaggctgattcagacgcccctgttttgact
aatgagagactcattgtcttggagggcggggagaatattctgaacaaagactatctatgg
gttcagacatccatctcgacaaactttgtttacagggtgacgcaagaccccaagtatggc
cgtctcatcagggagtccccctctggacagcccaggttcgacggggccattagaatgttc
agcaatgaggatctgaatctagataggctgatttaccaacatgatggctccgagtctagc
gatgatgagttctctttcctggtattcgagcaagcagcaggaagtgaaaacatcagaatc
gatggtcaagagtctatgagcagcatgtttagaatatctattcagtccaagaacgaccac
gtgcctcttagagtggttgataaaaccttcaatgtggtgcgaaacggacaacgtttgctg
accacagaagatatcctcttcagggacaatgactcagggttcaatgatacccagttggtc
tttgttcgcacaggcattctctcaggaaatattgtctccccatcagacccctcgcagccc
ctctttcgtttcactcaagcagacgtgaaagaccagaatgttctgtttgtgcaccatgga
gcagaccgtgagcgcttccagctccaggtttctgatggcctgcataagaccacagccctg
ctgcagatccaggctggtgaggcctacctccgtgtggtgaacaacactatggttgttatg
gaccatggaagcacaaagacgctcaacaccagtctcttgagtgcagagtccaacatggac
attagagacgccagtgacattaggtaccaagtgacatcaccccctagtgatgggaagatc
atcgtgagtgggattgaggcctcttggttcacacaagaggatctgaaaaagggtgtggtg
tcctacgagcataatgaccagagtctgagctccaaggactcgtttggcttcactgtggaa
gcgaaaggatattctgaggagggtacattcagaataaagatcttcaagcaaggctatctg
tcggagcctgtggtcatcaccaatgaggtcatcatctcctatgagggagagcacactgtg
atcaaccaagatcatcttaaggtagaacaagcagacatcctgccctctgagatggtgttc
accatcaaggagcctcctcgtctgggccacgtggtcatgctgaccaacgactcggacagt
acggctgcgcccagcctcgactacatccactccttcacccaggaggatgtcaacaggggg
cgcatcctctatgtctctgcctccatccagggcagtgacgcctttgcggctgacgtcagt
aacgggttcaccactgtggatgacctccggatgatggtggacattgtgcctcgcctcatc
cccatccaggccctcaacttcagtgtgagggagggcggtgggatggcccttaccactgag
ctcctgaatatttctcacccattctacagtgcggtcaacgtggacttcgtcgtagaggag
ccaccgcagcatgggggtatccgctacttggatggtgacgaacaagagctcaccttcttt
acctgggaggaggtgaaacttggacacatctactacttacatgacagcacggaaagtggc
gaggacaatttcacactctctgcctcagcctatgagatagagcgccgcagccttcccgtt
accttcactgtcaccgtcttcccggtcaacgatgaggcacctaaactgacatgcaacaca
ggactggaggttttagctggagaggaatcggacatcaccaccagcatgttgaatacagaa
gatgcagacacccccatcaatgagttggtttattccatcgagtcaaccatcaatgggttg
gtggctctaaaggtggaacctgacgaagaaattcagaacttcacacaggcacaaattaac
aatggggaagtcatctttatccatgaaggtctggagtctggaggcttcagttttaccgtg
acagatggagagcacacctcgcctctctaccgctttgtcgttacggctagacagctcacc
atcaccatggaaaccggggaggagctaaagatctttccaggaacaagacatgccatcacc
agtgccattttgaaggcagtgaccaatgaggatggagatgagataagcttctcattggtc
aggcctcctcgcctgggaagactgatcttagccaacgacaggaaccagtttgaagagatc
acacgcttctcacaatcagatctggagtccggggccgtcttttacgagcaccagatgcct
gaggagcccttctgggtggtccgggactctgtggagctcctgctctcctcccctccagcc
cccgctgtgcatcacgtcctccccatcaccgtgtcctactccgcagccagcgacaacatc
tcctcacagctctggaagaacagaggtctggacatagtgcaaggtcagaggaaggtgatt
gacagttccatcctggacgcctccaacctgctggccagcctccccgaggcggaacgaggt
cccttggatgtggtctttgaggtgcgacgcttcccggcccatgggagagtcaccctgggg
ggcctgaatctgccccagggtgccccctacttcatgcaggaggatgtggcgcagggcgag
ctggaatacctccacgatgactctggagcctccgtggacagcttctccttccgagcccgg
ctcaactcccagggccgcggcacacttcccccctccccagcccaggcagtggtcctggag
gaggtcttcaacatctcaatccggagaagggactctagtcctccagagctggtgagcttg
gacgttcttctggaggttctccagggctccatgacggtgatcacccaaaagtacctcaac
acccgcgacgaggacagcacgcccgatgaggtgcgcttcacagtctcaaaggcgcccacc
aacgggcggctggtggatgccaccaagggcgaccacatctccatgttcacccaggaagcg
gtcaacaagggccaggtggggtttgtcagtgacggaagcctgtcggacggcttcatagag
ttcactgtgtcggacgggaagcaccacactgagccgcacactctccatgtaggagtcctg
gcccggacgctggtgctggccaaagccccagagatccaggtgctgcagggggacgacgag
accctattgacagaggagatgttgagggccaccacaggtggccccaatgaggaggaagtc
ctctacaagatcaccagtgtgcccaagtacgctgccgtcatggtggaccggcagcccacg
tcggccttcactcagacccagataagggagggccgggtgagcgttcgcttcatcaagtcc
acctcaccccgggacagcgtggcctttgtggcccggagccgggcggccaatgtctcctct
gtcctcaacatcacggtcaagcctctggccaacatcccccagggactcctgctgccacgg
ggtgccaccgtgctgctggacaagaagctgctggatgccacgccgctggccaacaagacc
cggacatcacccaccttcagcatcatccagcaaccgcaaggcgcccgcttcgtgagggct
ggcgggagagggccagagggagacggccagcctgtggacacgttcacccagaaagaactg
gatgagggacgtgtagccatggagatcctgaatggaacaggaggcagccaagcccaggac
gtggctcgcttcctgctcaaggcccacggggtccctccagctgagtgcgttctctccttc
aagacgaccccttacaacgcctcagcggtctacccggccactctccttaaggtccctggc
gggtctgcatggccaaatagcaacgacctccctggaggggcggggtccccacgcatcacc
ccagccagccctcgctggaggggcaacatggactggcctcatggaggagatgcccctacc
actgcctacactgacaaagactcccataggaaaccagtggtgtccaggaggaacaacctg
tggtccatcctcatccccattctgatcctcctgctcctcctcctgctggtggccatcttg
gctttctacttggtgcgtcgcaacaagacgggcaaacacaatgtgcagacggtggctggc
tccaagcccaaaaacggagagatcagccaggagaccttccggaaaaccgacccggccaat
aacatccccatgtcccaaatggactccaaagacgccgacccggaattgctgcagcactgt
cggacaacgaacccggagttaaaaaagaaccagtactgggtatga
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integrated database retrieval system
