Oncorhynchus kisutch (coho salmon): 109867457
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Entry
109867457 CDS
T09179
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3 isoform X1
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109867457
Enzymes [BR:
oki01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109867457
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109867457
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-RING_UBOX
WD40_CDC20-Fz
Beta-prop_WDR5
zf-C3HC4
Beta-prop_THOC3
WDR55
Beta-prop_EML_2
Beta-prop_WDR3_1st
zf-rbx1
EIF3I
zf-RING_5
zf-C3HC4_2
zf-C3HC4_3
zf-RING_11
Beta-prop_WDR3_2nd
zf-ANAPC11
WD40
zf-RING_Vps41
Beta-prop_WDR75_1st
Beta-prop_EML
zf-C3HC4_4
Rtf2
WD40_Prp19
WD40_WDHD1_1st
WD40_2
CFAP43_N
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_ACSF4
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
109867457
NCBI-ProteinID:
XP_020312216
LinkDB
All DBs
Position
LG22:519190..538586
Genome browser
AA seq
717 aa
AA seq
DB search
MEVMEAMEVDLQLGGPSREPEPDVVADQVDLPIVIPDSGSETEDEADAAPCDPPRLPNTW
AFSQNRARVEGQVGSRIRREGHIEPRVTTAATLRHRRARPGLREHSSTQTAARASSFLDF
LLRVPAANQAEGDSGSTTELSESEDEADPPGPAAEPPNSAVPSSPRPNPPVAVTPPEGLY
SSDSNATTEAARTVTGNQVNPEVVSDPLASSAPALRLSQGDEGEGETCSICFEPWTTSGE
HRLATLRCGHLFGYTCIARWVKGQGQRARCPQCNKKTKRTDIVLLYARKLRALDNTEQES
MKRSLEQEHSLRRKAELESAQCRLKLQVMTDECGELHKQLQELKTLMAQPGCGPSQSSAT
SLSGLFQRQDSTQGGHYVFSKAVLVSQVGGCRVLSYCEPLSCLLASQPSPHTSLVPGCGV
KKMSTLNLKVCQYIPIHVKQIRGLAFNRQADSLLLSAALDNTIKLTSLMTNTVVQTYNTG
KPVWSCCWCLDNNNYVYAGLSNGSVLVYDTRDTSTHVQELQPLRSRCPVASLSYVPRAAS
SSFPCGGLIAGSLDGGCFWEQVGGTTYRPHMLPLETGGCTDIQVQPESRHCLVTYRPGRS
KPSLRCVLMELNRTPQQDATQEPSCSCYPVQTFSAGSSCKLLTKNAVFRSPAGEGSTLVC
AGDEATNSIMVWDAGSGSLIQKLSADLPVLDICPFEVNQGSYLASLTEKMLKIYKWE
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgatggaggcgatggaggtggacttgcagctggggggccccagtagggaacca
gagccagatgttgtggcagaccaggtagatctccctatcgtcatccctgactctggcagt
gaaacagaggacgaggcagatgcagctccctgtgacccaccacggctcccgaacacctgg
gcgttcagtcagaacagagccagagtggagggtcaagttgggtccaggatcagaagggag
ggtcatattgagcccagggtcaccacagcagccaccctgaggcatcggagagccaggcca
ggcctcagggagcactcctccacccagaccgctgctcgtgctagcagcttcctggatttc
ctgctgcgagtccctgcagccaaccaggccgagggcgactctgggagtacgacggagctg
agcgagtcggaggatgaggcagatcctccggggccagcagcagagcctcccaactcggcc
gttccctccagccctcgtccaaaccctccagttgcagtcacgccacccgaaggcctttat
tcttcagattctaatgcaaccacagaggctgcgaggaccgtgactggaaatcaagtgaat
cctgaggttgtatcagacccactagcctccagtgcaccggcccttcggttgtcccagggg
gatgagggggaaggggagacctgctccatctgctttgagccctggaccacgtcaggggag
catcgcctggccaccctgcgctgcggacatctctttggctacacctgcatcgcccgctgg
gtgaagggccagggccagagagccaggtgtccccagtgcaacaagaagactaagcgcacc
gatatcgtcctcctgtacgcgcgcaagctgagggctctggacaacaccgagcaggagagt
atgaagaggtcactggagcaagagcattcactgcgtagaaaggctgaactggagtcagcg
cagtgccgactaaaactgcaggtgatgacagacgaatgtggggaactgcacaagcagcta
caggagctgaagactctgatggcccagcctggctgtgggccctcacagagctcagcgaca
tcgctctctgggctctttcagagacaggacagcacccaggggggccactatgtcttctcc
aaggccgtgctggtgtcccaggtggggggatgcagggtgctgtcctactgtgaacccctc
agctgcctgctggcctctcagccctccccacacactagcctggtgcccggctgcggggtg
aagaagatgagcacgttgaatctgaaggtctgccagtacattcccatccatgtcaaacag
atcagaggcctggccttcaacagacaggccgacagcctcctgctctccgctgccctggac
aacaccataaaactcaccagtctaatgaccaacacagtggtgcagacctacaacacaggc
aaaccagtgtggagctgctgctggtgcctggacaacaacaactatgtgtacgctggtctc
agtaacggctccgtgctggtgtatgacaccagggacaccagcacacatgtccaggagcta
cagccactacgttccaggtgtcccgtggcatccctgtcctatgtgcctcgcgccgcctcc
agctcgttcccatgtggtggcctcatcgcaggctctctggatgggggctgcttctgggag
caagtaggcgggaccacctacagaccccacatgttgcccctggagacaggaggctgcaca
gacatccaggtgcagccagagagcagacactgtttggtcacctacagaccagggcgctcc
aagccatcgctgcgctgtgttctgatggagctgaacaggaccccccagcaggacgcgact
caggaaccctcgtgttcctgctacccagtccagacattcagcgctggctcctcctgcaag
ctgctcaccaagaatgccgtgttcagaagcccggccggggagggctccactctggtgtgt
gccggggacgaggccaccaactccatcatggtgtgggatgcagggagtggatccctgatt
cagaagttgtctgctgacctcccagtgttggacatctgtccatttgaggtgaaccagggc
agttacctggcctctctcactgagaagatgctcaaaatttacaagtgggaatga
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