Oncorhynchus kisutch (coho salmon): 109867501
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Entry
109867501 CDS
T09179
Name
(RefSeq) interferon regulatory factor 8 isoform X2
KO
K09447
interferon regulatory factor 7
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04620
Toll-like receptor signaling pathway
oki04621
NOD-like receptor signaling pathway
oki04622
RIG-I-like receptor signaling pathway
oki04623
Cytosolic DNA-sensing pathway
oki05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
109867501
04621 NOD-like receptor signaling pathway
109867501
04622 RIG-I-like receptor signaling pathway
109867501
04623 Cytosolic DNA-sensing pathway
109867501
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109867501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109867501
Transcription factors [BR:
oki03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
109867501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
OYE-like_second_a-b
Motif
Other DBs
NCBI-GeneID:
109867501
NCBI-ProteinID:
XP_020312280
Ensembl:
ENSOKIG00005038143
UniProt:
A0A8C7MXV3
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All DBs
Position
LG22:complement(33405179..33409412)
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AA seq
455 aa
AA seq
DB search
MTEVRGSALKMQSRNPKPQFADWLIEQVWTGQYAGLCFVDNNKFRVPWKHISRKDCCEDD
SKIFRAWAVVSGKINTHPNDKAKWKTNFRCVLNNLTKRFMMVEDHSKDSDDPHKVYLIIN
NESNYGSPHIEEIAVEDYDIDIHSSLTSTGYTPPGMEHDNLLKLVNTIDLNRHTEEWAET
YIHTHHPVVPEDCYPFQPLTEPQPVSQNPSPPPVQVPVQQPYDHVNQDALLNLPAAQPSL
CDLEITISYRRREMLKTQVSGHMVQLHYQCDVPEPNAQTLCFPSTDGLLDHKQIEYTNCI
LGSVQRGLLLEVRNTGIYGYRQDKCHVFSSTSDPREAHPEPRKMPQNEMVQLLSFDKYMT
ELIAFKENRGGSPDYTIHMCFGEKFPDGKPLEKKLIIVKVVPLICRHFHEMAQGEGASSL
QNDNISLQISHHNSLMELISATWPDGPEHTMGQYF
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagtacgtggctcagcattaaagatgcaaagccgcaaccccaaacctcagttt
gcggactggctgatagaacaggtgtggaccgggcaatacgccgggttgtgttttgtggac
aacaacaagttcagagtcccgtggaaacacatctctaggaaggactgctgcgaggacgac
agtaaaatattcagggcatgggcagtggtcagtggtaaaatcaacacacatcccaatgac
aaggcaaagtggaagactaacttccgctgtgtactgaacaacctgaccaagcgtttcatg
atggtggaagaccactccaaggactcagacgatccccataaagtctacctgattatcaac
aatgagtctaactatgggagcccacacatagaggaaattgctgtggaggactatgacatt
gacatccacagctctctcacctctacaggctatacccccccaggcatggagcatgataat
ctactcaagcttgtgaacaccatagacctgaaccgacatactgaggagtgggcagagacc
tatatacacacacaccacccagtggtaccagaagactgctaccccttccagcctctaaca
gagccccagccagtctcccagaacccctcaccaccaccagtccaagtaccagtacagcag
ccatacgaccacgtgaaccaggatgccctgctcaacctgcctgctgcccagccgtctctc
tgtgacctggagatcaccatctcctacaggaggagagagatgctgaagacccaggtgtca
ggccacatggttcagctccactaccagtgtgatgtccctgagcccaacgcccagaccctc
tgcttccctagcactgacggcctgctagaccacaaacagattgaatacaccaactgcatc
ctagggagtgtccaaaggggtcttctcctggaggtacgaaacacgggtatctatggttac
cggcaggacaaatgccatgtgttctctagtactagtgaccccagagaggcacaccctgaa
cccaggaagatgccccaaaatgaaatggtacaactgttgagcttcgacaagtatatgact
gagctgatagcatttaaggagaacagaggaggctctcctgactataccatccacatgtgc
tttggcgagaagttcccagacggaaaacccctggagaagaaactcatcattgtcaaggtg
gttcccttgatctgtcgtcacttccacgagatggcccagggggagggggcatcttccctc
cagaacgacaacatcagcctgcagatctcccaccacaacagcctgatggagcttatcagt
gccacctggcccgatggcccagagcacaccatggggcaatatttctag
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