Oncorhynchus kisutch (coho salmon): 109867543
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Entry
109867543 CDS
T09179
Name
(RefSeq) E3 ubiquitin-protein ligase Hakai isoform X2
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109867543
04131 Membrane trafficking [BR:
oki04131
]
109867543
04121 Ubiquitin system [BR:
oki04121
]
109867543
Enzymes [BR:
oki01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109867543
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
109867543
Membrane trafficking [BR:
oki04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
109867543
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109867543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_Hakai
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
109867543
NCBI-ProteinID:
XP_020312336
Ensembl:
ENSOKIG00005041357
UniProt:
A0A8C7N1A0
LinkDB
All DBs
Position
LG22:complement(36095255..36103507)
Genome browser
AA seq
486 aa
AA seq
DB search
MYQNDTDLQGTDGSGILGGPDVRRRIPIKLISKQPVRNKAVNHSQRPLSRLPSKTQSNDE
EGFGFKQEDRFERKSGDALGNQRRFPQPVFWDYKLNLVGKKDDTPVHFCEICGLPIKLYG
RMIPCKHVFCYDCALLHEKKMEKMCPGLTLYSCTDPVQRIEQCLRGLLYMCSIVPGCKRT
YLSQRDLQAHVNHRHMRASKAAGGGILPRLEPLHPQLASEPPDHFRRLPLPPLAKGHPLI
PPQLQGHDPYGQPPPASPSTPSSELGPSGLHRPPLGQETFRIATLTTRKHSNLITVPIQD
DSGDSPLPQSAQGMPPPHQHQGDYPGQPHHLMALPPQQQHYGPPPQPPPTLSHPMQHLPQ
GSGTPHLVYNQVPPMSSGLPPITPPPGHIMGQMPPYMNHPPPPGPLPQHSGPPVNTPPPH
HYNPSSMQQDRGTLSPPFNQPGGLSPGMWPAPRGTHPQRMPGPPPHGQMPGPPQHPDQSR
YHPYYQ
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgtaccaaaatgacactgatctacaaggcactgatggttcaggcattcttgggggccct
gatgtacgcagacggatccccattaagctgatatccaagcagccagtcagaaacaaggct
gttaaccactcacagagacccttaagcagactgccctccaaaacccagtctaatgatgaa
gagggctttgggttcaagcaggaagatagatttgagcgcaagtctggagatgcgttaggc
aaccagaggaggttccctcagcccgtgttctgggactacaaactgaatctggttggcaaa
aaggacgacacgccagttcatttctgtgagatatgtggccttcccataaagctctatgga
cgcatgattccctgcaagcatgtattttgctatgattgtgccctgctccatgagaagaag
atggaaaagatgtgtccaggtctcaccctatacagctgcacagatccggtccagcggatc
gagcagtgcctgcggggcctcctctacatgtgcagcatcgttccgggctgcaagcgcacc
tacttgtcccagcgcgacctgcaggcccatgtcaaccaccgacacatgagggcatccaag
gctgcaggagggggcattctaccacgccttgagcccttgcatccacaactggcctcagag
ccacctgaccacttccgtcgactaccactgccccccttggccaaaggacaccccctcata
cccccacagctgcagggacacgacccctatggtcagccccctcccgcctctccgtcaacc
ccctcctctgaactgggcccctctggtctccatcgccccccactgggtcaggagacgttc
cgcattgccacgttgactactcgcaagcacagcaacctcatcactgtgcccattcaggat
gactctggggactcgccccttccccagtctgcccagggcatgccccctccccaccagcat
cagggagactaccctggccagccccaccacctgatggccctcccaccccagcagcagcac
tacggcccaccccctcagccgccacccaccctcagccaccctatgcagcacctgcctcag
ggctccgggacgcctcatctggtctacaaccaggtccctcccatgtcctcaggcctgcct
cctatcaccccaccacccggacacatcatgggccagatgcctccctacatgaaccaccca
cctcccccaggccccctgccccaacacagtggtcctcctgttaacacgccccctccccac
cactacaatccaagctccatgcagcaggatcggggcactcttagcccgccctttaatcag
cccgggggactgagcccagggatgtggccagcccccaggggcactcacccgcaacgcatg
ccggggcccccaccccatggccagatgcctggtcctccccagcacccagaccagtcccgc
taccacccttactatcagtaa
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