Oncorhynchus kisutch (coho salmon): 109867594
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Entry
109867594 CDS
T09179
Name
(RefSeq) transcription factor Sox-19a-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109867594
Transcription factors [BR:
oki03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
109867594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
HTH_24
Motif
Other DBs
NCBI-GeneID:
109867594
NCBI-ProteinID:
XP_020312424
Ensembl:
ENSOKIG00005008222
UniProt:
A0A8C7DD40
LinkDB
All DBs
Position
LG22:complement(11538873..11541130)
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AA seq
311 aa
AA seq
DB search
MVNMYNIMEHQLKSSGPSHHLGTGMPPANGGGGHGGGHTGSKPPAIQPDPMDKVKRPMNA
FMVWSRGERRKMAQENPKMHNSEISKRLGVAWKSLTDAEKRPFIDEAKRLRAVHMKDYPD
YKYKPRRKTKLMPKNNTLAAQYQMSAGNHLLSASTAQGQGGNPRIDSYGWGHTGGYTAAM
QSEALGYSQQLHRYDLSALQYQSSVAQAQAYMNGANAYSPMSYSSSPQQVSPVMSMVKQQ
SDGHSMSPSPTGTHNHHQAQRGPQVQGDHLRDMISMYMPGGDASDAQRGYSASAANIQQH
YLGGSAPLTHL
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggtaaatatgtataacattatggagcaccaactcaaatcctctggtccctcgcatcat
cttggaacagggatgccacctgccaatggaggaggggggcacgggggcggccacacagga
tccaaaccaccggcaatccaacccgacccgatggacaaagtcaagcggcccatgaatgcc
ttcatggtatggtctcgcggtgagcgacggaaaatggcccaggagaatcccaaaatgcac
aattctgagatatccaaacgactgggtgtcgcgtggaaatctctgacagacgctgagaaa
aggcccttcattgacgaggccaagcgcctccgcgcggtgcacatgaaggattatccagac
tataaatacaaaccccgtcgtaaaaccaaactaatgccgaagaacaatactctagccgcg
cagtatcagatgtcggctggtaaccacctgctgagtgcgtccacggctcagggacaaggt
ggaaaccccagaatcgacagttatggctggggccacaccgggggctacacagcggcgatg
cagagcgaggcgctcggctacagccagcaacttcaccgctatgacctgtcagcacttcag
tatcagtccagcgtggcccaggcgcaggcctacatgaatggtgccaacgcatacagcccc
atgtcctacagcagcagcccccagcaggtcagcccagtgatgtctatggtgaagcagcag
tctgatggccacagcatgtccccctcccctacggggacccacaaccaccaccaggcccag
cgtggtccccaggtccagggggaccatctcagagacatgatcagcatgtacatgcctggg
ggagatgcttcagatgcccagagggggtactctgcctcagcagctaacatccagcagcat
tacctgggagggtcagctccactcacccacctttga
DBGET
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