Oncorhynchus kisutch (coho salmon): 109867631
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Entry
109867631 CDS
T09179
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-4-like isoform X1
KO
K04861
voltage-dependent calcium channel alpha-2/delta-4
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04010
MAPK signaling pathway
oki04260
Cardiac muscle contraction
oki04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109867631
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
109867631
04261 Adrenergic signaling in cardiomyocytes
109867631
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109867631
Ion channels [BR:
oki04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
109867631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
dCache_1
VWA_3
VWA
VWA_2
CobT_C
dCache_2
Zn_ribbon_5
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
109867631
NCBI-ProteinID:
XP_020312469
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Position
LG22:complement(703861..787696)
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AA seq
1309 aa
AA seq
DB search
MSSSGDTVGPGRMGLGPRADTVGPGRMGLGPRADTVGPGRMGLGPKANTVGPGRMGLGPR
ADTVGPGRMGLGPRADTVGPGRMGLGPKANTVGPGRMGLGPRADTVGPGRMGLGPRANTV
GPGRMGLGPRANTVGPGRMGLGPRADTVDPGRMKLGPRADTVDPYGMGLGPRADTVDPYV
MGLGPRADTVDPYWMGLGPRAEPGGVTNRMGPRGTPAGLRLGLWILCFSWFCFTAHAQMK
IPPETVQDWANVLSVQLREATTRYSGANILQKKFRDVESIIKIVDIDGRAQVRDFSEDIE
RMLGSKMKSVKRLAESAEDADLYHEFNKTLQFDYYNSMLVNTMDDDGNFIELGGEFPLEE
NEHFNNIPVNTMQSDVQVPTNVYNKDPYILNGIYMSEALNDVFANNFKKDPTLTWQYFGS
SSGFFRIYPGIKWTPDSNGVAAFDCRNRNWYIQAATSPKDIIIVVDISGSMKGLKMTIAK
HTINTILDTLGENDFVNVIAYTDYVRYVEPCFQGTLVQADLDNREHFKVLVDDLHVKGEG
KVAKAMKESFKILNEAATKGQGSLCNQAIMLITDGAMEDFKDVFEEFNWPDRRVRLFTYL
IGREMTFADNTKWIACNNKGYYTHISTLADVQENVMEYLHVLSRPMVINHNHDIIWTEAY
MDSVLFATKAQSLLLMTSVAMPVFSKKKETLSHGILLGVVGSDIPLLEVMKLAPRYRLGP
HGYAFLITNNGYILAHPDLRPLYKDGKKLKPKPNYNSVDLAEVEWEDIDETLRTAMVKGE
TGTLSLNVRASVDKAKRPMFLTNDYFYTTINDTPFSFGMVLTRGHGQLMFMGTVSVEEGL
HDLTSPDLSIAAEWTYCETDIDPHHRKYSQLQAVIRYLQGKEPDLECDEVLLQQTLFDAV
VTAPLEAYWQAIMLNASGMEAGVETAFLGTRSGIIRLTRYTGMETRVAKKFLTPADKDNL
FTMDHFPLWYRLAMENPAGRFLYYMPVEDNDNKDKTGASKYVIAVTAVTVSSGGKTAMAG
AIGVQMSLEMLEKRLWAITFQPNDTDCTEVEGVCPLTCQSIDVNCFLVDSNGFIIVSKER
SEVGRFFGEVDGSVMTALITSGMFKQVSLYDYQGMCRSGHSHSSGARPLLSPFYGLAAVI
KWLFSHMLMFLMEFNVCGLWHSDYIVDAKAGYHTSHKAKKVDALQPCDTEYPGFVYDSSI
RETNSLIKCGRCQKMFVVQAVPESNLVLMVVQADCDCSRQYSSITLEPKEVKYNASVKCN
RMKSQKVRRRPNSCHAYHPKENAKDCGGASEISLSVAVFLTSLATSLAL
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcctcaggcgacacagtgggcccaggcaggatgggactaggacccagggctgac
acagtgggcccaggcaggatgggactaggacccagggctgacacagtgggcccaggcagg
atgggactaggacccaaggctaacacagtgggcccaggcaggatgggactaggacccagg
gctgacacagtgggcccaggcaggatgggactaggacccagggctgacacagtgggccca
ggcaggatgggactaggacccaaggctaacacagtgggcccaggcaggatgggactagga
cccagggctgacacagtgggcccaggcaggatgggactaggacccagggctaacacagtg
ggcccaggcaggatgggactaggacccagggctaacacagtgggcccaggcaggatggga
ctaggacccagggctgacacagtggacccaggcaggatgaaactaggacccagggctgac
acagtggacccttacgggatgggactaggacccagggctgacacagtggacccttacgtg
atgggactaggacccagggctgacacagtggacccttactggatgggactaggacccagg
gccgagccaggtggagtaacgaacaggatgggacccagagggactccagcggggctgagg
ctgggcctgtggatcctgtgtttcagctggttctgcttcactgctcacgctcagatgaag
ataccacctgagacggtccaagattgggcaaatgtcctttcagtgcaactacgcgaggct
accacaagatattcgggagctaacattctgcaaaagaaattcagagatgtagagtccatt
atcaagatagtggacatcgatgggagagcccaagtgagggacttttcagaggacatagag
agaatgctggggtccaagatgaagtccgttaagcggttggctgagtctgcggaggatgca
gatttgtaccacgagttcaacaaaactctacagtttgactactataattccatgctggtg
aacacaatggatgacgatggtaacttcatcgagctgggtggggagtttcctctggaggag
aatgagcatttcaacaacatcccagtcaacacaatgcagagtgacgtacaggtccccacc
aatgtctacaacaaagatccctacatcctcaatggaatctacatgtcggaagctttgaat
gacgtgttcgccaataacttcaagaaagaccccaccctcacctggcagtactttggcagc
tcctcgggtttcttcagaatctaccctggtatcaaatggactccagattcaaatggtgtg
gctgcttttgactgcaggaaccgtaactggtatattcaggctgccacctcaccaaaggac
attatcattgtggtggacatcagtggcagtatgaaaggcttgaagatgaccattgccaaa
cataccatcaacaccatcctggacacgctgggggagaacgactttgtcaacgtcattgct
tacactgactacgtgcgctacgtagagccctgcttccaaggcactctggtgcaggctgat
ttggacaaccgtgagcattttaaggtgctggtggatgacctgcatgtgaagggagagggt
aaagttgcgaaggccatgaaggaatcgttcaaaatcttgaacgaggcagcgaccaagggc
caaggcagcctgtgcaaccaggccatcatgctgatcacagatggagccatggaggacttc
aaggacgtgtttgaagagttcaactggcctgatcgcagggtgcggctcttcacttacctt
ataggcagagagatgacctttgcagacaacaccaagtggatagcctgcaacaataagggt
tactacacacacatctccactctggctgacgtacaggagaatgtcatggagtaccttcat
gtcttgagtcgaccaatggtcatcaatcacaatcatgacatcatctggacggaggcctac
atggactctgtgctctttgccacaaaggctcaaagtttacttctcatgacctccgtggca
atgcctgtcttcagcaagaagaaagagacgctgtcccatgggattctgctgggtgtggtg
ggttctgacatccccctgctggaggtcatgaagctggctcccagatataggctgggtcca
catggttacgccttcctcatcaccaacaacggttacatcctggcacaccctgacctgcga
cctctttataaagatggtaagaagctgaagcccaagcccaactacaacagtgtggacctg
gctgaggtggagtgggaggacatagatgagacactaaggacagccatggtgaaaggggag
acaggcactctgtccttaaatgtgagagcatcagtggacaaagcgaaaaggcctatgttc
ttaacaaatgactatttctacacaaccatcaacgacaccccattcagttttggtatggtg
ctgaccaggggtcacggacagctgatgttcatggggacggtctctgtggaagagggcctg
catgacctgacgtcccctgatctatccatagccgctgagtggacatactgtgagacagac
attgatcctcaccaccgcaaatactctcagctccaggctgtcattcgctacctgcagggg
aaggagcctgacctggagtgtgacgaggtgctgctgcagcagaccctgtttgatgctgtg
gtgacagcccccttagaagcctactggcaggcaataatgctcaatgcatctgggatggag
gcgggtgtggagacagccttcctgggaactcgctctggcatcatccggctgaccagatac
accggcatggagaccagggtcgccaagaagttcctgactccagcggataaggacaacctg
ttcaccatggaccactttccgctgtggtaccgtctggccatggagaaccctgccggaaga
ttcctctactacatgccggtggaggacaatgacaacaaagacaagacaggggcgtcgaag
tatgtcatagctgtcacagctgtgactgtgtcatcgggaggcaagacagccatggctgga
gccatcggggtgcagatgtccttggaaatgctggagaagaggctatgggccattaccttt
cagcccaatgacacagactgtactgaagtggaaggtgtctgccctctcacctgtcaaagc
attgatgtcaactgtttccttgtggacagcaacggtttcatcatagtctcgaaagagagg
tcagaggtcggacgtttctttggggaagtggatgggtctgtgatgacagcgttgatcacg
tcaggcatgttcaagcaggtgtcgctgtatgactaccagggtatgtgtagatcaggacac
agtcattccagtggtgctcggcctcttctcagtcctttctacggccttgcggcagtgatc
aaatggttattttctcacatgttgatgttcttaatggagttcaacgtctgtgggttgtgg
cactcggattacattgtagacgccaaggctggctaccatacatcccataaagccaagaag
gttgacgcgctgcagccgtgtgacacagagtatcctggcttcgtgtacgattcctccatc
agagaaaccaacagcctcatcaaatgtggccgttgtcagaagatgtttgtggtgcaggcg
gttcctgaaagtaacctggtgttgatggtggtccaggcggactgtgactgctcccgccag
tactcctccatcaccctggagcccaaggaggtcaaatacaacgcatcagtcaagtgtaac
aggatgaaatctcagaaagtccgccggcgcccaaactcctgtcacgcctatcatcctaag
gaaaatgccaaggactgtggaggagcttcagagatcagcctatcggtggccgtcttcttg
acttctctggccacttcattggccctctga
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