Oncorhynchus kisutch (coho salmon): 109867907
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Entry
109867907 CDS
T09179
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109867907
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109867907
03110 Chaperones and folding catalysts [BR:
oki03110
]
109867907
03029 Mitochondrial biogenesis [BR:
oki03029
]
109867907
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oki04147
]
109867907
Enzymes [BR:
oki01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
109867907
Messenger RNA biogenesis [BR:
oki03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
109867907
Chaperones and folding catalysts [BR:
oki03110
]
Heat shock proteins
HSP60 / Chaperonin
109867907
Mitochondrial biogenesis [BR:
oki03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
109867907
Exosome [BR:
oki04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109867907
Exosomal proteins of other body fluids (saliva and urine)
109867907
Exosomal proteins of breast cancer cells
109867907
Exosomal proteins of colorectal cancer cells
109867907
Exosomal proteins of bladder cancer cells
109867907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Gag_p15
AcnX_swivel_put
Motif
Other DBs
NCBI-GeneID:
109867907
NCBI-ProteinID:
XP_020312819
Ensembl:
ENSOKIG00005000168
LinkDB
All DBs
Position
LG2:49904148..49912427
Genome browser
AA seq
576 aa
AA seq
DB search
MLRLPTVMRQMRPVSRALAPHLTRAYAKDVKFGADARAMMLKGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKAIDLKCKYQNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFDSISKGANPVEIRRGVMLAVETVINELKRMSKPVTTPEEIAQVATISANGDV
EIGTIISNAMKKVGRKGVITVKDGKTLYDELEIIEGLKFDRGYISPYFINTAKGQKCEFQ
DAYVLLSEKKISSVQSIVPALELANQHRKPLVIVAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKAQLHDMAVATGGTVFGDEAVGIALEDIQAHDFGKVGEVSVTKDDTMLLKG
KGDTAAIEKRQAEIVEQLENTTSDYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVPGGGCALLRSIPALDALVPINTDQKIGIDIIRRALRVPAMTIA
KNAGVEGSLVVEKILQAAGEIGYDAMAGEYVNMVEKGIIDPTKVVRTALMDAAGVASLLS
TAECVVTELPKDEKEAGMPGGMGGMGGMGGMGGGMF
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgtctacccacagtgatgagacagatgaggccagtcagcagggccctggccccc
cacctcacccgggcttacgccaaggatgtcaagtttggagccgatgcccgggccatgatg
ctgaagggagtggatctgctggctgatgctgtcgctgtcaccatgggacccaagggtcgc
acagtcattatcgagcagagttggggcagccccaaggtgaccaaggatggcgtcactgta
gccaaggccatcgacctgaagtgcaagtaccagaacattggtgccaagctggtccaggac
gtggccaacaacacgaacgaggaagcgggagatggcaccaccactgccaccgtgctagcc
agagccatcgccaaggagggctttgacagcatcagtaaaggagctaaccctgtggagatc
cgccgtggcgtcatgctggctgtggagaccgtcatcaatgagctgaagaggatgtccaag
ccagtcaccacccctgaggagattgcccaggtggccaccatctctgctaatggagacgta
gagatcggcaccatcatctccaacgccatgaagaaagtgggccgcaagggagtcatcact
gtcaaggatggcaaaaccctttatgatgagcttgagatcattgaggggctgaagttcgac
cgtggatacatctccccttacttcatcaacacagccaaaggccagaagtgtgagttccag
gatgcctatgtgttgctgagtgagaagaaaatctcttctgtccagagcatcgtccctgcc
ctggaattggccaaccagcaccgcaaacctctggtcatcgtggccgaggatgtggacgga
gaggccctcagcaccctggtcctcaacaggctgaaggtgggactgcaagtggtggcagtc
aaggccccaggctttggagacaacaggaaggcccagctgcatgacatggccgttgccacc
gggggcactgtgtttggtgatgaggcggtgggcattgctctggaggacatccaggcccat
gactttggtaaggttggcgaggtgtctgtcaccaaggacgacaccatgctgctgaagggg
aagggagacactgcggccatcgagaagcgccaggcagaaatcgttgagcagctggagaac
accactagcgactatgagaaggagaagctcaacgagaggcttgccaagctgtctgacgga
gtggctgtgctcaaggtaggaggaacgagtgatgtggaggtgaatgagaagaaggaccgt
gtgaccgatgccctgaatgccaccagggccgctgtggaggagggcattgtgcccggaggt
ggctgtgccctgctgcgctccatccctgccctggatgccctcgtgcccattaacactgac
cagaagattggaattgacatcatcagacgagccctgcgtgtgccagccatgaccattgcg
aagaacgctggtgtggagggctctctagtggtggagaagatccttcaggccgcgggggag
ataggatacgatgccatggcgggagagtacgtcaacatggtagagaagggcatcatcgac
cccaccaaggtggtaagaacggcactgatggacgctgcaggtgtggcttctctgctctcc
accgccgagtgtgtggtcacagaactgcccaaggatgaaaaggaggctggcatgccaggg
ggcatgggtggtatgggaggtatggggggcatgggaggtggcatgttctaa
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integrated database retrieval system
