Oncorhynchus kisutch (coho salmon): 109867947
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Entry
109867947 CDS
T09179
Symbol
smc5
Name
(RefSeq) structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oki03400
]
109867947 (smc5)
DNA repair and recombination proteins [BR:
oki03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
109867947 (smc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_13
Tuftelin_like
CEP135_TSGA10_CC
AAA_29
FKBP15
IFT57
GCN5L1
AAA_25
Motif
Other DBs
NCBI-GeneID:
109867947
NCBI-ProteinID:
XP_020312880
Ensembl:
ENSOKIG00005007310
LinkDB
All DBs
Position
LG23:complement(21540820..21565468)
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AA seq
1074 aa
AA seq
DB search
MASAGKKKRISNVTNTQPSNNGAGSSSGTVGDGQVSGFVEGSIIRITMQNFLTYDHSIVH
PGPNLNMIVGANGTGKSSIVCAICLGLAGKTAILGRGDKVGLYVKRGCNKGSVEIVLHKA
KGNLVINREIHVENNQSTWLLNGKHSSQKTVEEEVKALQIQVSNLCQFLPQEKVGEFAKM
TKIELLEATEKSVGPPEMYEFHCELKTFRTKERELENVCKEKASALEKFKQRNERNKHDV
ERYYEKKRHLDNIKMLEKKKPWVEYETARKELEGVKKSREDAKKQLKTVRESQAPMLKKI
QHIDSQLRPIENQMKDKTVSIREASQKCKQKQDQLDRKHREIEDIKQAFSLKQTEAADRQ
KRISNTRRMIDDLRAELANVGDQSDVTPRINAVNAELRRIQEEKAKMEGEKADMRREKDN
LNGECRLLKNRLRSLDDMMKIKEEKLRGRSKDTYAAVQWLRQNKHIFSGNVYEPMMLVIS
VRNPNHAKYVENHIPFNDLRAFVFQKREDMEKFMMEVRDSQNLRVNSVFAPEESCATRAP
SRPIESLKRFGFFAYLRELFDAPEEVMSYLCNQYKVHDVPVGTDQTKAMIKTVIEEPYLK
VLYTAEEKYSLKKSFYSGKTSTSNSAVRPSQYLTMAVDAEEKCQLEEQIRTAEKSMQAID
VQMSAMQERTAKLDHCDNELRAQKKGLSEMKGKKRQLEQKISTKQDSLRQMEQGGIDLQK
AEEETKAQISAVNSQKVAIVAEFMAHMKLRAKLSMEKVYMALETVGMTAEKTKLETDCRE
GSAELRVLEQACAMLEQRKARLLEMCKGLMRRAREICNMDPGESAVPPDLHTAFSQLPDT
MDEIDAMLNEERSRAECFTGLSENVVDEYNRREQEIKNLEKELDEKSNALKTYRQNISEA
KERWLNPLKQLVEQINDKFSDFFRSMQCAGEVDLHSENEEEYDKYGIRIRVKFRSSTQLH
ELTAHHQSGGERSVSTMLYLMALQELNRCPFRVVDEINQGMDPVNERRVFDIVVRTACKE
TTSQYFFITPKLLQNLQYADEMTVLCVHNGPHMLPPNKWDEKAFTRRCLRRKGK
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgcgggcaagaaaaaacgaataagtaacgtaacgaacacacaaccttcaaat
aatggagcaggttcgtcctctggtaccgttggagatggccaggtgtctggatttgtcgaa
ggatccatcattcgcatcacaatgcaaaacttcctgacctatgaccactccatagttcac
cctggaccaaacctaaacatgattgtgggggccaatggaactggcaagtccagtattgtc
tgtgccatatgtctgggtctggcaggaaagactgccatcctgggcagaggggacaaggtt
gggctgtatgtgaagcgtgggtgcaacaaagggtcggttgagattgtactgcacaaagcc
aaagggaacctggtgatcaatagagagatccatgtggagaataaccagtcgacgtggttg
cttaatgggaaacactccagccagaagactgtggaggaggaggtgaaggctctacagatc
caagtgagcaacctctgccagtttctgccacaggagaaggtgggtgagtttgccaagatg
accaagattgagctgctagaggccacagagaagtcagtgggacctccagagatgtatgag
ttccactgcgagctcaaaaccttccgcaccaaagagagggaactggagaatgtgtgcaag
gagaaggccagcgccctggagaagttcaagcagaggaacgaacggaacaagcacgacgtg
gagcgctactacgagaagaagagacacctggacaacataaagatgctggagaagaagaaa
ccctgggtggagtatgagactgcccgtaaggagctggagggggtgaagaaatcaagggag
gatgccaagaagcagctgaaaactgtgagggagtcccaggcccccatgctgaagaaaatc
cagcacatcgacagtcagctgaggcccatcgagaaccagatgaaggacaagacggtcagc
atcagggaggcctctcagaagtgtaaacagaaacaggaccagctggaccggaagcacaga
gagattgaggatatcaagcaggccttcagcctgaagcagacagaggcggcggaccggcag
aagcgaatcagcaacacccggcgcatgattgatgacttgagggcggagctggccaacgta
ggtgaccaatcagacgtgacgccgcggatcaatgcagtgaatgcggagctgaggcgcatc
caggaagagaaagcaaagatggagggagaaaaggccgacatgcgtagggaaaaggacaac
ttgaacggagagtgtagactgttgaagaacaggctgaggagtctggatgacatgatgaaa
atcaaggaggagaagctgagagggcgctccaaggatacctacgctgccgtccagtggctg
aggcagaacaaacacatcttcagtggcaatgtctatgaacctatgatgctagtgattagt
gtccgcaaccctaaccatgctaagtacgtggagaaccacattccattcaatgacctgcga
gcctttgtcttccagaagagggaagacatggagaagtttatgatggaggtgcgtgacagc
cagaacctgagggtgaattcagtcttcgctcctgaggaatcctgcgccacccgcgctccc
tcccgacccatcgagtctctgaagcgttttgggttctttgcgtacctgcgggagctcttt
gatgctccagaagaggttatgagctacctctgcaaccagtacaaggtgcacgatgttccc
gtgggaacggaccaaaccaaagccatgatcaagacggtgattgaggagccctacctgaag
gtgctttacacagctgaggagaagtactccctgaagaagtccttttactcgggcaagacc
agtaccagtaactctgccgtgcggccctcccagtacctcaccatggccgtggacgccgag
gagaaatgccagctggaggagcagatcaggactgctgaaaagagcatgcaggccattgat
gtccagatgagcgccatgcaggaacgtactgccaaactggatcactgtgacaatgagcta
cgggcccagaaaaaggggctctcggagatgaagggtaaaaagagacagttggaacagaag
atcagtaccaagcaggacagtcttcggcagatggagcaggggggcattgacctacagaag
gctgaggaggagaccaaggcccagatctcagcagtcaactcccagaaggtggccattgtg
gctgagttcatggcccacatgaagctgagggctaagttgagtatggagaaggtgtacatg
gctcttgagaccgtgggcatgacagcagagaagaccaagctggagactgactgcagggag
ggctcggccgagctcagggtcctagagcaagcgtgtgccatgctggagcagcgcaaggcc
cgtctgttggagatgtgtaagggcctaatgaggagggccagggagatctgtaacatggac
cctggggagagtgctgtacccccagacctacacacagccttcagccagctgcccgacact
atggatgagatagacgccatgttgaatgaggagaggtccagggcagagtgcttcactggc
ctcagtgaaaatgtggtggatgagtacaacaggagagagcaggagatcaagaacctggag
aaagaactggatgagaagagcaatgccctgaaaacctacagacagaacatatcagaggca
aaggagcgctggctgaatcctctgaagcaactggtagagcagatcaatgacaagttcagt
gatttcttccgctccatgcagtgtgccggggaggtggacctgcattcagagaacgaggag
gagtatgataaatacgggatccgtatccgggtgaagttccgtagcagcacgcagctccac
gagctcacagcacaccaccagagtggaggggagcgcagtgtctccacaatgctctacctc
atggccctgcaagagctcaaccgctgtcccttccgagtggtggatgagatcaaccagggt
atggacccagtcaatgaaaggagagtctttgacattgttgtacggacagcctgcaaggag
acaacctcccagtacttcttcatcacacccaagctccttcagaacctccagtatgcagat
gagatgactgtcctgtgtgtccataacggacctcacatgctgccccccaacaagtgggac
gagaaggccttcaccagacgctgcctccgccgcaagggcaaatag
DBGET
integrated database retrieval system
