Oncorhynchus kisutch (coho salmon): 109867994
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Entry
109867994 CDS
T09179
Symbol
dcp2
Name
(RefSeq) m7GpppN-mRNA hydrolase isoform X1
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109867994 (dcp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109867994 (dcp2)
Enzymes [BR:
oki01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
109867994 (dcp2)
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109867994 (dcp2)
mRNA degradation factors
5'-3' decay
Decapping complex
109867994 (dcp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP2
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-GeneID:
109867994
NCBI-ProteinID:
XP_020312938
Ensembl:
ENSOKIG00005050306
LinkDB
All DBs
Position
LG23:complement(40290268..40304716)
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AA seq
402 aa
AA seq
DB search
METKRGEIPNGVLDDLCSRFILHIPSEERDNAIRVCFQIELAHWFYLDFCMQNAPGLPQC
GIRDFAKAVFNHCPFLLPNGEDVQKVLEQWKEYKMGVPTYGAIILDESLDNALLVQGYLA
KSGWGFPKGKVNEDEAPHVCAVREVMEETGFDIKDRICKDTYIEQKITDQLARLYIIPGV
PKETKFNPKTRKEIRNIEWFPIEKLPCHRNDMTPKSKLGLAPNKFFMAIPFVRPLREWIA
KRKGESTDSDEDFASNGSTPCKPLDKARSKHRRAQMLPEASPAEGWGKQKQPKPLGQLSQ
YEVSELLKAKNLNVKGNGKKHQDSPNLKKRANGVGNQQKEEKRLQPRRLQDNFDTDAALP
SDTCSSTNGQQVVCNSNCEHLSSRSFLNFKFDREAIMKCFDS
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggagacaaaaagaggggagattcccaacggcgtattggacgacctctgcagtcgattc
atcctccacatccctagtgaagagagagacaatgctatccgcgtgtgcttccagatcgag
cttgcccattggttctacctggacttctgcatgcagaatgcaccaggattacctcagtgc
gggataagggactttgccaaggctgtttttaatcattgtccattcttgctgcccaatggg
gaggatgtacagaaggttctagaacagtggaaggaatataagatgggtgttccaacctat
ggtgccattattctagatgagtcgcttgacaatgcattgctggttcagggctatttggcc
aagtcagggtggggctttccaaagggaaaagtcaatgaagatgaggctccccatgtttgt
gctgtacgagaggttatggaggagacgggtttcgatatcaaagatcgcatctgcaaagat
acgtacatcgagcagaaaatcactgatcagttggcccgattgtacataatacctggggta
cccaaggagactaagttcaaccccaaaacaaggaaggagataaggaacatcgagtggttc
ccgattgagaaactaccatgtcacagaaatgacatgactcccaagtctaaacttggactc
gcccccaacaagtttttcatggccattccttttgtcagaccactccgagaatggattgcc
aagcgtaaaggagagtctacagacagtgatgaggattttgcatccaatggcagcactcca
tgcaaacctctggacaaagcacgctccaagcatcgacgggcccagatgttgcctgaggca
tctccagcagaggggtgggggaagcagaagcaacccaagcctctgggacagctgagccaa
tacgaggtctctgaactcttgaaagccaagaacctcaatgtgaaaggcaatgggaagaag
caccaggattctcccaacctgaagaaaagggccaatggagtcggcaaccagcagaaagag
gagaagagacttcagcccaggagactacaggacaacttcgacacagatgcagcactgcca
tctgacacgtgcagctccaccaatgggcagcaggtggtctgcaacagcaactgtgaacac
ctctcctccaggtccttcctcaacttcaagttcgacagggaggccatcatgaaatgcttt
gactcctga
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