Oncorhynchus kisutch (coho salmon): 109868000
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Entry
109868000 CDS
T09179
Symbol
vldlr
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109868000 (vldlr)
Membrane trafficking [BR:
oki04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
109868000 (vldlr)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
EGF_CA
cEGF
SGL
Motif
Other DBs
NCBI-GeneID:
109868000
NCBI-ProteinID:
XP_020312945
Ensembl:
ENSOKIG00005014361
UniProt:
A0A8C7FUP8
LinkDB
All DBs
Position
LG23:10010213..10025546
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AA seq
878 aa
AA seq
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MVTSILGLLILPICLQQCGVVHGSKTECEPSQFQCGNGRCIPSVWQCDGDEDCSDGSDED
TCVRKTCAAVDFVCRNGQCVPKRWHCDGEPDCEDGSDESVDVCHTRTCRVNEFSCGAGST
QCIPVFWKCDGEKDCDNGEDEINCGNITCASLEFTCASGRCISRNFVCNGEDDCGDGSDE
QECAPSSCGPSEFQCGNATCIPGSWVCDDDVDCQDQSDESPQRCGRHPTPPAKCSPSETQ
CGSGECIHRKWLCDGDSDCKDGSDEANCAVRTCRPDQFKCEDGTCIHGSRQCNSLRDCAD
GTDEVNCKNLTQCNGPDRFKCRSGECIEMSKVCNKARDCPDWSDEPIKECNLNECLLNNG
GCSHMCRDMVIGYECDCTPGLQLIDRKTCGDIDECMNPGICSQICINLKGGYKCECHNSY
QMDPTTGVCKAVGTEPCLIFTNRRDIRKLGLERREYTQIVEQLRNTVALDADFTQQTLFW
ADLSQRAIFSTVLDKRGDVGSHVKVIGNVQTPVGIAVDWIYKNIYWSDLGTKTIAVANFI
GTKRKVLFDSGLKEPASVAVDPLSGFLYWSDWGEPAKIEKSGMNGVDRQVLVETDIQWPN
GITLDLIKSRLYWVDSKLHMLSSVDLNGDNRRKVLQSPGYLAHPFAVTVFEDRVFWTDGE
NEAIYGANKFTGSDVITLASNLNEPQDIIVYHELIQLPGTNWCNEKAQNGGCAYMCLPAP
QINKYSPKYTCVCPKDQTLASNGLHCRPVSPSTHSKDDGKALIRPTDPKVTTVPKVVPQP
VPAEANVSTAIREVDSTARGSAAAWVILPVLFLAMAAAGGYLMWRNWQLKNKKSMNFDNP
VYLKTTEDDLNIDISRHSSNIGHTYPAISVVNTEDDLS
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggtcacgtctattcttgggctccttatcctaccaatatgtcttcagcagtgtggtgtt
gtacacggatcgaagacagaatgtgagcccagtcagttccagtgtgggaatggccgctgc
atcccgtctgtctggcagtgtgacggggatgaggactgctccgacggcagtgacgaggac
acctgtgttcgtaagacctgtgcggcagtggattttgtctgtcgcaatggccaatgcgtc
cccaagagatggcactgcgacggtgagccagactgcgaggatggctctgacgagagcgtg
gatgtttgccacaccaggacctgccgtgtgaatgagtttagctgtggcgccgggtccacc
caatgcatcccggtcttctggaagtgtgatggagagaaggactgcgataacggcgaggat
gaaattaactgcggtaacatcacgtgcgcctcactggagttcacctgtgcgagcggccgc
tgcatctcccgtaactttgtgtgcaacggcgaggacgactgtggcgatgggagtgacgag
caggagtgtgccccgtcgtcctgcggccccagcgagtttcagtgtggcaacgccacctgt
atccctggcagctgggtgtgtgacgacgacgtggattgccaggaccaatcggacgaatcc
cctcagcgctgtggtcgccaccccacgcccccggctaaatgttcacccagcgagacgcag
tgtggctctggggagtgcatccaccgcaagtggctctgtgacggagactccgactgcaag
gacggcagtgacgaagcaaactgtgctgttcgtacctgcaggccagaccagttcaagtgc
gaggacggcacctgtatccacggcagcagacagtgcaacagcttgcgtgattgtgcagat
ggcaccgacgaagtcaactgcaaaaacttgactcagtgcaacggccctgaccggttcaag
tgtcggagtggcgagtgtatcgagatgagcaaagtgtgcaacaaggcccgggactgtcct
gactggagtgacgagcccatcaaagagtgcaacctgaacgagtgtctgctgaacaatgga
ggctgctcccacatgtgcagggacatggtgattggctacgagtgtgactgcacccctgga
ctgcagctcatagaccgtaaaacctgcggggacatcgatgagtgtatgaatcctgggatc
tgtagtcagatctgtatcaacctgaagggagggtataagtgcgagtgccacaacagttac
cagatggaccccaccacgggagtgtgcaaggccgtgggcacggagccctgtctgatcttc
actaaccggagggacatccggaagctgggtctggagaggagggagtacacgcagatcgtg
gagcagctacggaacacagtggcactggatgcagacttcacccagcagacgctcttctgg
gctgacctgagccagagggccatcttcagcacggtgttggataagcgaggagatgtagga
agtcatgtgaaggtgataggtaacgtccagacaccagtggggatcgcagttgactggatc
tacaagaacatctactggtcagacctcggtaccaagaccatagctgtggccaacttcatc
ggcaccaaacgaaaagttctctttgacagcggtttgaaagagcctgcgtctgtcgctgtt
gatccactctctggattcttgtactggtcagattggggtgaaccagctaagattgagaag
tcgggcatgaacggggttgacaggcaggtcctggtcgagactgatattcagtggcccaat
ggaatcactctggacctgatcaagagtagactgtattgggtggactcaaagttgcacatg
ctctctagtgtcgacctgaacggagacaaccggaggaaagtgctccagtccccaggatac
ctggctcaccccttcgctgtcactgtgttcgaggatcgagtgttttggacagatggggag
aacgaggcaatctacggagcaaacaagttcacaggctctgatgtgattaccctggcaagc
aatctgaacgaaccacaggacatcattgtttaccacgagctaatccagctgcctgggaca
aactggtgcaatgagaaggctcagaatggtggctgtgcctacatgtgcctgccagctcca
cagatcaacaaatactcccccaaatacacgtgcgtgtgtccgaaagaccagacgctcgct
tcaaacggccttcactgtcgaccagtgagcccttctactcactcaaaggatgatgggaaa
gctctaatacgtcccactgaccccaaagtgaccacggtgccaaaagttgtcccccaacct
gtccctgctgaagccaacgtcagtacagccatccgtgaggtggactctacagctagagga
tctgcagctgcctgggttatcctccctgtgttgttcctggccatggctgctgcaggaggc
tacttgatgtggcgcaactggcagctgaagaataaaaagagcatgaactttgacaatcca
gtgtacctgaaaaccaccgaagacgacctcaacattgatatcagcaggcactcctccaat
ataggccacacctacccagcaatatcagttgtgaatacagaagatgacttgtcataa
DBGET
integrated database retrieval system
