Oncorhynchus kisutch (coho salmon): 109868034
Help
Entry
109868034 CDS
T09179
Name
(RefSeq) nuclear pore complex protein Nup155 isoform X1
KO
K14312
nuclear pore complex protein Nup155
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109868034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109868034
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109868034
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
109868034
NCBI-ProteinID:
XP_020313003
Ensembl:
ENSOKIG00005020587
LinkDB
All DBs
Position
LG23:11412850..11432013
Genome browser
AA seq
1391 aa
AA seq
DB search
MPSTLGPSSPAAALAEALESSGRLIDRHLQDDRCFPDLSELLNVPSHNMPSLSGGSDMDY
PLQGPGLISVPNLPELSAVRRVPLPPELVEQFSHMQCNCMMGVFPEICRAWLTIDNDIFM
WNYEDGGDVAYFDGLSETILSVGLVKPKAGIFQPHIHFLLVLATPVDVVILGLSFPKAQA
GLNDSMSGGMQLLPDPLYSIPTDNTYLLAITSTDLGRIFLAGKDGCLYEVAYQAEAGWFS
QRCKKINHSKSSLSFLVPSLLQFSFSEDDPVVQIAIDNSRNTLFTRSEKGVLQVYDLGVD
GQGMSRVAAMSQSSIVAAAGNVARTIDRSVFKPIIQISVIDRSESSDCHLLAVTHAGVRL
YFSTAPFAPPHAKQPGVRPCLLALVHVRLPPGFSASSTLQKPAKVHKALHSKGVLLMAAS
ETEDSDILWCINHDSFPFKKPLMEAQMMSNVDGHSWALCAIKEEKAPKISTPLNKDQVPL
TDSPVVVQQHNVPPQKFVLLSAKGSHIFHKLRPVDQLRHLLVSGTGGESEEVERFFKLHR
EEQACATALIVACSSAACDREVSQWATRAFFRYGGEAQMRFPSAHSAPSNVGALFGSPVP
GSPMPVGSSPMPNPSFLATPVPGMMPQSVSTPYIPATPMPSAPITGMSSGPEVVFSGKHN
GISVYFARIMGNIWDGSLAVEKTISKGNQAVSILESTASSSDLESVLLELRGLKDFLDKN
SQFSPSSLGAASFSSPANLQQRLLGFMRPDGGASSQQVQQELQRKYHTEAQAYEKMSLQG
IQQLVHRSCQTLALWKLLCDHQFSLIISELPMEFQDQMKGASFKDVVIRGRELTGALITA
LINVYIKDSASVDAISNHLRDICPLLYSSDDSVCSKANELLQGSRQIQTKIDKERTLRES
LQLYQLISQHTDLPLVCSQYRQVRFYEGVLELCLTAADKKDPQRLGPHFYKNGEPEEDQA
GALAFQERLSCYKCITDTMQELVNQSKAAPQSPSVPKQPGPPVMTSDPNMLSNEDATAHF
EQVIGLAQRSQDELFHIALYNWLIQADLTDKLLEVNSPYLEEHLMHMIKQDQSKVRNMDL
LWRYYEKSRSFGKAAHVLARLADMHSTEISLKQRLEYISRAILSAKSSSCISAQGAEGEF
LHELEEKMEVVRIQVQIQETLSRRYSQHPSVQGAMSQLDSELMDITKLYGEFADHFRLSE
CKLAIIHCAGHSDPILVHSLWQEIMEKELGDSVAMSPADRMRALSLKLVSLGKIYAGTPR
YFPLEFLVKFLEQEVCHLNWDVGFVTFTMQEIGVQLPRLLEVYDQLFKTRDPCWQRLKKP
LHLVECIHVLLSGYVEDPSRVPTYDRRRFTNVCLDNICGYLVELQSLSPNSTLRLTIGNF
KALQAKLEKVH
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccaccttgggacccagcagtcctgctgctgcccttgcggaagcgctggagagc
tctggccggctcatagacagacacctccaggatgaccgctgcttccctgacctctcagag
cttcttaatgtcccctcacacaacatgccatctttgtctggggggtcagacatggactac
cctcttcagggacctgggctgatcagcgtgccaaaccttcctgagctcagtgcagtccga
agggttcccctaccccctgagctggtggagcaattcagccatatgcagtgcaattgtatg
atgggagtttttcctgaaatctgtcgagcatggctcaccattgacaacgatatcttcatg
tggaattatgaggatgggggggacgttgcatattttgacggactcagtgaaaccatcctg
tccgtggggctggtcaaacctaaagcagggattttccagccacacatccatttcctgttg
gtcctagccactcctgtggatgtagtgatcctggggctcagcttccctaaagctcaggca
gggttgaatgacagcatgtctggagggatgcagttactaccagacccgctgtactccatc
cccacagacaacacctacctcctggccatcacctccaccgacctgggccgcatcttcctg
gcagggaaagatggctgcctgtatgaggtagcctaccaggccgaggcaggctggttcagc
caacgctgtaagaagattaaccactccaaaagcagcctgtccttcctagtcccctctctg
ctccagttctccttctctgaggacgacccggtagtgcagattgccattgacaactcccgt
aacacactcttcacccgctcagagaagggggttctacaggtgtatgatctgggtgtagat
gggcagggtatgagccgtgtggcggccatgtcacagagttccatcgtggctgcagcagga
aacgttgccaggaccatagatcgctctgtgtttaaacccatcattcagatctctgtgata
gacagatcggagtcgtccgactgccacctgctggctgtcactcatgcaggagtgcgtctc
tacttcagcaccgctccctttgccccaccacatgccaagcagccaggggtacgcccttgc
ctgcttgctctggtccatgtccgcctgcctccaggcttctctgcgtcctccaccctgcag
aagcctgccaaggtccacaaggctctgcacagcaaaggagttctcctgatggcagcgtct
gagactgaggacagtgacatcctgtggtgcatcaaccacgactccttcccctttaagaaa
cccctgatggaggctcagatgatgtccaatgtagatggccactcctgggcgctttgtgcc
atcaaggaggagaaggcacctaaaatctctacccccctgaataaggatcaggttcccctc
actgactctcctgtcgtggtgcagcaacacaatgtccctccacagaaatttgtccttctc
tctgccaagggaagtcatatcttccacaagttgcggccggtggaccagctgcgccaccta
ctggtgagcggtactggtggagagagtgaagaagtcgaacgcttcttcaaactgcacagg
gaggagcaggcgtgtgccactgctctgatagtagcctgttccagtgctgcctgcgacaga
gaggtgtctcagtgggccaccagagccttctttaggtatggaggagaggctcagatgagg
ttcccctcggctcattctgctcctagcaacgtcggcgctctgttcggctctcctgtacca
gggtcccctatgccggttggtagcagtccaatgcctaaccctagtttcttagcaacgcct
gttccaggtatgatgccccagagtgtgtctacgccctatataccagccacgcccatgccc
tccgcccccatcactggcatgtcttctgggccagaggtggtcttctcagggaaacacaat
ggcatcagtgtctacttcgcacgcataatgggtaatatctgggacgggagtcttgctgtt
gagaagaccatcagtaaaggaaatcaggctgtcagtattttggagagcacagccagctca
tctgatctggagtcagttcttctggagctccgtggtctgaaggacttcctggataagaac
tcccagttcagcccctcgtctctgggggcagccagtttcagctctccagctaatctgcag
cagcgtctgctgggcttcatgcggcctgatggaggagccagttctcagcaggtccagcag
gaactccagaggaagtaccacaccgaggctcaggcctatgagaagatgtccctgcagggt
atccagcagctggtgcatcgctcctgtcagaccctggcactgtggaagctgctgtgtgac
caccagtttagcctcatcatctctgaactacccatggagttccaggaccagatgaagggg
gcgagttttaaggacgtggtgatccggggtcgagagctgaccggagctctgatcacagcc
ctcatcaacgtctacatcaaagactccgcctctgtcgatgccatcagcaaccaccttaga
gacatctgtcctttgctgtacagcagcgacgacagcgtctgctcaaaggctaatgagttg
ctgcagggctccagacagatccagactaagatcgataaggagagaacacttagagagtca
ctacaactctaccagctgatcagccaacacacagacctgccactggtctgctcccagtac
agacaggtgcgtttttatgagggggtgcttgagctgtgcctgactgcagcggataagaag
gatcctcagaggctgggacctcacttctataagaacggagaaccagaggaggaccaggct
ggagcactggccttccaggagaggttgtcatgttataagtgcatcacagacaccatgcag
gagctggtgaaccagagtaaagcggctcctcagtctcccagtgtccctaagcagccagga
ccgcctgttatgacctctgaccccaacatgctgagtaatgaggatgccaccgcccacttt
gagcaggtcattggtctggcccagaggtcacaggatgaactcttccacatagccctctac
aactggctgatacaggctgacctcaccgacaagcttctggaggtgaactctccatacctg
gaggaacacctgatgcacatgatcaagcaggaccagagtaaggtgcggaacatggacctg
ctgtggcggtactatgagaagagccgtagctttggcaaggcagctcacgtcctggccagg
ctcgctgacatgcacagtactgagatctccctgaagcagaggctggaatacatctccagg
gccatcctgtcagccaagagctcctcctgcatctctgctcaaggagctgaaggggagttc
ctgcatgagctggaggagaagatggaggtggtgcgtattcaggtccagatccaggagact
ctgagcagacgttactcccagcatccctctgtacagggagccatgtcacaactggattcc
gagcttatggacatcaccaagttgtatggggagtttgcagatcacttccggttgtctgaa
tgcaaactggccatcatccactgtgctggtcactctgaccccatcctggtgcactctctg
tggcaggagatcatggagaaagagctgggtgacagtgtggccatgagtccagctgacagg
atgagagctctgagtctcaaactggtgtctctggggaaaatctacgcaggaacacccaga
tactttccactagaattcctggtgaagtttttggagcaggaggtgtgtcatctgaattgg
gacgtgggctttgtcaccttcaccatgcaggagataggagtacagctcccccgtctgctg
gaggtctacgaccaactcttcaagacacgggatccgtgttggcagcgtctgaagaaacct
ctccacctggtagagtgtatacatgtgctgctgtcaggatacgtagaggaccccagcaga
gtaccaacatatgaccgacggcggttcactaatgtgtgtctggataacatctgtggttac
ctggtggagctgcagtccctgagtcctaactctaccctgcggctcaccatcggcaacttc
aaggccctgcaggccaagctggagaaagttcactga
DBGET
integrated database retrieval system
