Oncorhynchus kisutch (coho salmon): 109868037
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Entry
109868037 CDS
T09179
Name
(RefSeq) serine/arginine-rich splicing factor 9
KO
K21123
serine/arginine-rich splicing factor 9
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03040
Spliceosome
oki05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109868037
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109868037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oki03041
]
109868037
Spliceosome [BR:
oki03041
]
Common components
Common spliceosomal components
SR proteins
109868037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_7
DUF2457
Nup35_RRM_2
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
109868037
NCBI-ProteinID:
XP_020313017
Ensembl:
ENSOKIG00005006125
UniProt:
A0A8C7DFH9
LinkDB
All DBs
Position
LG23:complement(12557086..12560737)
Genome browser
AA seq
252 aa
AA seq
DB search
MTDGRIYVGNLPMDVQERDIEDLFFKYGKIRDIELKNNRGTIPFAFVRFEDPRDAEDAVY
GRNGYGFGDSKLRVEYPRSSGAKFSGPMGGGERGEGGGPKGRFGPPTRRSEFRVIVTGLP
PSGSWQDLKDHMREAGDVCFADVQRDGEGVVEFVRREDMEYALRRLDRTEFRSHQGEMAN
IRVHGEHGASYGRSQSRSRSPRGRGYSPPPYKSRGSPPQRYQSPPRRHVSRHSPPARRHP
VTHHSPPPRHYR
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggaaggatctacgtgggaaatcttccaatggacgtccaggagagggacata
gaggatctcttcttcaaatatggaaaaattcgggatatcgaactaaagaataacagggga
accatcccttttgcttttgttcgcttcgaagatccacgggatgcagaagatgctgtctat
ggaaggaatggatatggattcggtgactccaagcttcgtgtagaataccctcgctcctct
ggtgccaaatttagtggccctatgggaggcggagaaagaggcgaaggagggggtcctaag
gggaggtttgggcctccaactcggagatctgagttccgggtgatagtgactggcttgccc
ccatcagggagctggcaggatcttaaagaccacatgcgtgaggcaggggatgtgtgtttc
gccgacgtgcagcgggatggtgaaggggtggtggagtttgtccgtcgggaggacatggag
tatgccctgcgcagactggacaggaccgagttccgctcccatcagggggagatggcaaac
attcgtgtccacggagaacatggtgccagttatggtcgctcgcagtcccgctccagatcc
ccccgggggcgtggctactcaccacctccttacaaaagcagagggtcccctccacagcgc
taccagtcacctccacggcgccatgtgtcccgccatagccccccagcgaggcgacaccca
gtaacacaccacagcccacccccacgccactatcggtag
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