KEGG   Oncorhynchus kisutch (coho salmon): 109868139
Entry
109868139         CDS       T09179                                 
Name
(RefSeq) ras-related protein rab7-like
  KO
K07897  Ras-related protein Rab-7A
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki04137  Mitophagy - animal
oki04140  Autophagy - animal
oki04144  Endocytosis
oki04145  Phagosome
oki04148  Efferocytosis
oki05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:oki00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    109868139
   04145 Phagosome
    109868139
   04140 Autophagy - animal
    109868139
   04137 Mitophagy - animal
    109868139
   04148 Efferocytosis
    109868139
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    109868139
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oki04131]
    109868139
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oki04147]
    109868139
   04031 GTP-binding proteins [BR:oki04031]
    109868139
Membrane trafficking [BR:oki04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    109868139
Exosome [BR:oki04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   109868139
  Exosomal proteins of other body fluids (saliva and urine)
   109868139
  Exosomal proteins of colorectal cancer cells
   109868139
  Exosomal proteins of bladder cancer cells
   109868139
GTP-binding proteins [BR:oki04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    109868139
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU RsgA_GTPase Gtr1_RagA cobW ATP_bind_1 nSTAND3 PduV-EutP AAA_16 NTPase_1 Septin AAA_22 AAA_24 AAA_7 DUF5992 AAA_5 ATPase_2 SRPRB NACHT ABC_tran NB-ARC
Other DBs
NCBI-GeneID: 109868139
NCBI-ProteinID: XP_020313189
Ensembl: ENSOKIG00005029423
LinkDB
Position
LG23:complement(28233464..28238000)
AA seq 205 aa
MASRKKVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPDNFPF
VVLGNKIDLENRQVTTKRAQAWCASKNNIPYFETSAKEAINVDQAFQTIARNALKQESEV
ETYDFPDQIKLRDDRSSSSSDGCSC
NT seq 618 nt   +upstreamnt  +downstreamnt
atggcctctcgtaagaaggtgctgctgaaggtgatcattctcggagactctggggtaggg
aagacatctctgatgaaccagtatgtaaataagaggttcagtaaccaatacaaggccact
ataggagctgacttcctcaccaaggaggtgatggtggatgacaggctggtcaccatgcag
atctgggacacggctgggcaggagcggtttcaatctctgggtgtggcgttctaccgtggg
gctgactgttgtgtgctggtctatgatgtcacggcgcccaacacctttaagactctggac
agttggagggatgagttcctgatccaggccagccccagagacccagataacttccccttt
gtggtgctaggcaacaagattgacctcgagaacagacaggtgacaacaaagcgtgcccag
gcctggtgtgccagtaagaacaacatcccctactttgagaccagtgccaaggaggccatc
aacgtagaccaagcattccagaccatcgcccgcaacgccctcaaacaggagtctgaggtg
gagacgtatgactttccagaccagatcaaactgagagatgaccggtcctcctcctccagc
gacggctgctcctgctga

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