KEGG   Oncorhynchus kisutch (coho salmon): 109868230
Entry
109868230         CDS       T09179                                 
Name
(RefSeq) splicing factor U2AF 65 kDa subunit-like isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109868230
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oki03041]
    109868230
Spliceosome [BR:oki03041]
 Complex A
  U2 snRNP components
   U2 related factors
    109868230
 Complex B
    109868230
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_7 AAA_8
Other DBs
NCBI-GeneID: 109868230
NCBI-ProteinID: XP_020313255
Ensembl: ENSOKIG00005008578
LinkDB
Position
LG13:73467356..73479050
AA seq 501 aa
MSDFDEFERQLSENKQAQLVEHGACNARIVRSIPGNTPEKDKENRHHRRSPSRSRSRERK
RRSRDKDRRSRDRRGDSKERRPRRSSPSQQQPQEIAVSRSPHRETKKKNKVKKYWDVPPP
GFEHISVMQYKAMQAAGQIPATALLPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIP
FGITEESMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGI
IFQGQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKE
LLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDVNLNDQITMENQAIAGLNGMQLGDKKLL
VQRASVGSKNATLTSINQTPVTLQVPGLMNSSMTQMAGLPTEVLCLMNMVAVEELVDEEE
YEEIVEDVRDECSKYGQVKSIEIPRPVDGLEVPGTGKIFVEFMSVFDSQKAMQGLTGRKF
ANRVVVTKYCDPDAYHRRDFW
NT seq 1506 nt   +upstreamnt  +downstreamnt
atgtcggatttcgacgaattcgagagacaactgtctgaaaacaaacaagctcagttggta
gagcatggcgcttgcaacgccaggatagtgcgctcgattcccgggaacaccccggagaag
gacaaggagaaccgccaccaccgtcgctccccctctcgcagccgcagcagagagaggaag
aggaggagcagagacaaggacagacgcagcagggatcgccgtggagacagcaaggagcgc
agaccgagacgcagctcaccatcccaacaacaaccccaagagattgctgtaagtcgttcc
ccgcaccgtgaaacgaagaagaagaacaaagtgaagaagtactgggacgtccctcctcct
ggctttgaacacatcagtgtgatgcagtacaaagccatgcaggctgcgggtcagatccca
gccacggccctgctgcccaccatgaccccagacggcctggccgtgacccccactcctgtc
cctgtggtgggaagccagatgaccagacaggcccgtcggctttatgtgggcaacatcccc
ttcggcatcacagaggagtccatgatggatttcttcaacgctcagatgcgtctgggtggt
ctcactcaggctccaggaaaccccgtcctcgctgttcagatcaaccaggacaagaacttt
gccttcctcgagttccgctcagtggatgagacaacccaggccatggctttcgatggcatc
atcttccagggacagagtctgaagatccgccgtccccatgactaccagcccctgcccggc
atgagcgagaaccccagcgtctacgtgcctggcgtggtgtccacagtggtgcctgactcg
gcccacaagctgttcatcgggggcctgcccaactacctgaatgatgaccaggtgaaggag
ctcctgacatcgtttgggcctctcaaggcctttaacttggtcaaggatagtgccacaggt
ttgtctaagggttatgccttctgtgagtatgtagacgtcaacctgaacgaccagatcacc
atggagaatcaggccatagcaggactcaacggcatgcagctgggagataaaaagctcctg
gtgcagagagccagcgtgggatccaagaatgccactctgacaagtataaaccagaccccg
gtgacgctgcaggtgccgggcctgatgaacagctcaatgacccagatggccggcctgccc
acagaggtgctctgtctgatgaatatggtggctgttgaggagctggtggatgaagaggaa
tacgaggagatcgtagaggatgtgagggacgagtgcagcaagtacggccaggtcaagagc
atcgagatccccagacctgtggatgggctggaggtccctggcactggcaagatctttgtg
gagttcatgtcagtgtttgactcccagaaggccatgcagggtctgacgggcaggaagttt
gctaaccgggtggtggtgaccaaatactgcgaccctgatgcctaccaccgccgagacttc
tggtag

DBGET integrated database retrieval system