KEGG   Oncorhynchus kisutch (coho salmon): 109868295
Entry
109868295         CDS       T09179                                 
Name
(RefSeq) integrin alpha-2
  KO
K06481  integrin alpha 2
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03271  Virion - Rotavirus
oki04145  Phagosome
oki04510  Focal adhesion
oki04512  ECM-receptor interaction
oki04810  Regulation of actin cytoskeleton
oki04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03271 Virion - Rotavirus
    109868295
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    109868295
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    109868295
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    109868295
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    109868295
   04810 Regulation of actin cytoskeleton
    109868295
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oki04147]
    109868295
   04515 Cell adhesion molecules [BR:oki04515]
    109868295
   04090 CD molecules [BR:oki04090]
    109868295
Exosome [BR:oki04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   109868295
  Exosomal proteins of bladder cancer cells
   109868295
Cell adhesion molecules [BR:oki04515]
 Integrins
  Integrin alpha subunits
   109868295
CD molecules [BR:oki04090]
 Proteins
  109868295
SSDB
Motif
Pfam: VWA Integrin_A_Ig_2 FG-GAP Integrin_A_Ig_3 Integrin_A_Ig_1 FG-GAP_3 FG-GAP_2 ITGAX-like_Ig_3 Cytadhesin_P30 Integrin_alpha FN3_IL27B_N TM_ErbB1
Other DBs
NCBI-GeneID: 109868295
NCBI-ProteinID: XP_020313337
Ensembl: ENSOKIG00005032045
LinkDB
Position
LG23:3486574..3529781
AA seq 1188 aa
MELNPKRTVLTLLLIQCWSIPLSLSFNVGTAGAKVFSGPALEEFGYTVKQFRNHQGKWLL
VGSPWSGYNQDRKGDIYKCEIRGSSSGCQRLNLQNSVSMSTVKNINVNMSLGLTLTHTAT
EDKFMTCGPLWAQKCGSQYYYPGICAEVNPLFNPLSSFSPALQTCGGPMDIAIIVDGSNS
IYPWPPVVAFLKKLLENLDIGPDNTQASIIQYGVEPVVEFHLNAYKTKDSIIAAAANILQ
REGLETNTFRAIEFARQNAFLPGNGARPGASKVMVVVTDGESHDKNLRDDVIRKCESEKI
TRFGIAVLGYYIRNDIDTKNLIAEIKSIASTPTDRYFFNVSAEEALLEIAGSLGDRIFNI
EGTGKGGDFQMEMSQVGFSAHQTKKQNMIMLGAVGAYGWSGTVVHYTTQKSDIFPKTAFE
RILEDRNHSSLLGYSVTTLNDGSIEYYVAGAPRSNHTGQVIVYIINGKGQPTVIDSQRGD
QIGSYYGSVLCPLDVDKDGVSDLLLVGAPMFMNEQQKEIGKVHLLSFTKGILSVQGFLTG
PSPVENARFGMSISAVPDLNMDGYSDVVVGAPLEDNNKGVIYVFNGDKKRLRTQYSQKIL
GSKLDPALQYFGRSMDASSDLNDDTIPDVSVGAYGMVVQLWSRGMAVVTARATFNPDTVS
ILSKTCRVSGRLVSCFNTSVCFSATFRPKIPVGPVAIRFNLTLDAELQSSRVTSRGQFRN
SERVLQKDIRVSTGEVCETLEVFVQEAPDFVSSIGLRVDITLQDPDSSPVLDVLSPTAWE
FFIPFSKDCGSDDVCLSDLLLKLKKGEMIPSSSRMLVSFKDKRLSFTVSVTNKKENAYNT
QVTATYSKNLFFASISPPSDGTEVKCTSTKESLTLSCQVGYPALRQNQEVTFGVNFDFNL
NQLQTEADVSFEALSDSTEANPSDNQASISVPVHYDSEISLSREANLNFYVVDMDNEAKT
AVNTFNDIGPEFKFSLKVSTGNFPVSLAYLTVSLPSATARGNPLLYVTGVKTEPAGEVSC
EVTSLVNPLKISEKPYTASFSKENLMGTEDLNCKTAKCQPMKCVLKDMGIKSDFFVNVTT
RIWNGTFAASSFQSTVLTVSTEIETSEPELLVVSHKHLTVGVTISKPGVKGEVPVGVIAG
SVIGGLLLLALVIGLLWKFGFFRRKYKQLMQNTEEDEAETEALENTAE
NT seq 3567 nt   +upstreamnt  +downstreamnt
atggagttgaatccaaagaggactgttttgacgttgcttttgatccaatgttggagcatc
cccctgtccctatcctttaatgtggggacggcaggagccaaggtattctctggacctgcc
ctcgaggagtttggatacaccgtgaaacagttcagaaatcaccagggaaaatggttgctg
gttggttccccctggagtggatacaaccaggacaggaaaggagacatctacaagtgtgag
atcagagggtccagttcaggctgccagagactcaacttgcagaactcagtcagcatgtcg
acagtgaagaacatcaatgtcaacatgagtctagggctaaccctcacccacacagctaca
gaagataagttcatgacatgtggacctctgtgggctcagaagtgtggcagccagtattat
tacccagggatctgtgcagaagtgaaccctctcttcaaccccctgtcttcgttctcaccc
gcccttcaaacttgtgggggtccaatggatattgctattattgtggatggatccaacagt
atatatccctggccaccagttgtggctttcctcaagaaactgttggagaatttagatatt
ggaccggataatactcaggcaagtattatacagtatggggttgagccagtcgttgaattc
catctgaacgcctacaaaaccaaagactcgatcattgcggctgcagcgaacattctacag
agggaaggcctggagacaaacaccttccgcgccattgaatttgctcgacagaacgcgttc
ctgcccgggaacggggctcgacccggagccagcaaagtgatggtggtggtgacggacgga
gagtctcacgacaagaacctccgagacgacgtcatcaggaagtgtgagagtgagaagatc
acccgctttggtattgctgtccttgggtattacataaggaatgacattgacactaagaac
ctgattgcggagatcaagtccatcgccagcaccccgacagataggtatttcttcaacgta
tcagctgaggaggctctgctcgagatcgctggatctctgggagaccgcatcttcaacatt
gagggtactgggaaaggtggtgactttcagatggagatgtcccaagtgggattcagtgcc
caccaaaccaagaagcagaacatgattatgctgggtgcagtgggggcctatggctggagt
ggtactgtggttcactacaccacccagaaatcggacatcttccccaagacggcctttgag
agaatcctagaggacagaaaccacagctcactattaggctactctgtgacaacactgaat
gatggcagcatagagtactatgtggctggcgctcctcggtccaaccacactggacaggtc
atagtgtacatcatcaacggcaagggacaacccaccgtcatcgactcccagagaggagac
cagataggctcctactacggcagcgtactctgtcctctggatgtggataaagatggtgtg
tctgatctactactggttggagctcccatgttcatgaacgaacagcagaaggagattggg
aaagtccatctcctctccttcacaaagggcatcctaagtgttcaggggttcctgacgggt
ccgtccccagtggagaacgctcgttttgggatgtctatctcagcggtgcctgacctcaac
atggatggctacagtgatgtggtggtgggagccccactggaagacaacaataaaggtgta
atctatgtcttcaacggggacaagaagagactcaggacacagtattcccagaaaatcctg
ggctccaagctggaccctgcgttgcagtacttcgggaggtccatggacgccagctccgac
ttaaacgatgacaccataccagatgtctcagtgggggcttatggaatggtggtccagctc
tggtctcggggtatggctgtggtgacagcgagggcaaccttcaaccctgacacggtcagc
atcctgagtaagacgtgcagggtcagtgggaggctggtgtcctgcttcaacacctcagtc
tgtttcagcgccaccttcaggcccaagatacctgtaggacctgtggctatcaggttcaac
ctgaccctagatgctgagctccagtcgtctcgtgtcacctccagaggtcagttcaggaac
tcagagagagtcctgcagaaagacatccgggtttccaccggggaggtctgtgagacacta
gaggtctttgtccaggaggcccctgactttgtgagctcaatcggtctgcgtgtggacatc
actctgcaggacccagactccagtcctgttctggatgttctcagtcccactgcctgggag
ttctttatcccattctccaaagactgtggctctgacgatgtgtgtttgagtgacctgctc
ttgaagttgaagaaaggagagatgattcccagctcgtctaggatgctggtcagctttaag
gacaagaggctgtccttcactgtgtctgtgaccaacaagaaggagaatgcgtacaacacc
caagtcacggccacgtactccaaaaacctcttcttcgcatccatcagtcctccaagtgat
ggaacagaggtgaagtgcacctccaccaaggagtctcttaccctctcatgccaggtgggg
tacccagctttaaggcagaaccaagaggtgacatttggagtcaactttgacttcaacctg
aatcaactgcagaccgaagccgacgtgagctttgaagctctaagtgacagcacagaggcg
aacccgtcagacaaccaggcctctatctccgtccctgtccactatgactcagagatctcc
ctctccagggaagccaatctcaacttctatgtggttgacatggacaatgaagcaaagacc
gcagttaataccttcaatgacatcggtcctgagttcaaattctctctgaaggtctctaca
gggaacttcccagtcagtctggcctacctcacagtctcactgcccagtgctacagcaaga
gggaacccattgctgtatgtgacaggagtcaaaacggaacctgctggcgaagtgagctgt
gaagtaaccagcctcgtcaaccctctgaagatcagtgagaagccttacacagcatccttc
tccaaggagaacctaatgggcacagaggatctgaactgtaagacagccaagtgccagcct
atgaagtgtgtcctgaaagacatggggataaagagcgatttcttcgtgaacgtgaccacg
cggatatggaacggtacctttgctgcttcatccttccagtccactgtgctgactgtgagc
acagagatagagacctccgagcctgaactgctggtcgtctctcacaagcacctgacggtt
ggcgtcaccatcagtaaacctggggtgaaaggagaggtgcctgtaggcgttattgcgggc
agtgtgattggaggcctgcttctattggctctggtcattggcctgctttggaagtttggc
ttcttccggagaaagtacaagcagctgatgcagaacactgaggaggatgaggcagagacc
gaggcactggagaacacagcagagtga

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