Oncorhynchus kisutch (coho salmon): 109868295
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Entry
109868295 CDS
T09179
Name
(RefSeq) integrin alpha-2
KO
K06481
integrin alpha 2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03271
Virion - Rotavirus
oki04145
Phagosome
oki04510
Focal adhesion
oki04512
ECM-receptor interaction
oki04810
Regulation of actin cytoskeleton
oki04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
109868295
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109868295
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
109868295
09144 Cellular community - eukaryotes
04510 Focal adhesion
109868295
09142 Cell motility
04820 Cytoskeleton in muscle cells
109868295
04810 Regulation of actin cytoskeleton
109868295
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oki04147
]
109868295
04515 Cell adhesion molecules [BR:
oki04515
]
109868295
04090 CD molecules [BR:
oki04090
]
109868295
Exosome [BR:
oki04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
109868295
Exosomal proteins of bladder cancer cells
109868295
Cell adhesion molecules [BR:
oki04515
]
Integrins
Integrin alpha subunits
109868295
CD molecules [BR:
oki04090
]
Proteins
109868295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Integrin_A_Ig_2
FG-GAP
Integrin_A_Ig_3
Integrin_A_Ig_1
FG-GAP_3
FG-GAP_2
ITGAX-like_Ig_3
Cytadhesin_P30
Integrin_alpha
FN3_IL27B_N
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
109868295
NCBI-ProteinID:
XP_020313337
Ensembl:
ENSOKIG00005032045
LinkDB
All DBs
Position
LG23:3486574..3529781
Genome browser
AA seq
1188 aa
AA seq
DB search
MELNPKRTVLTLLLIQCWSIPLSLSFNVGTAGAKVFSGPALEEFGYTVKQFRNHQGKWLL
VGSPWSGYNQDRKGDIYKCEIRGSSSGCQRLNLQNSVSMSTVKNINVNMSLGLTLTHTAT
EDKFMTCGPLWAQKCGSQYYYPGICAEVNPLFNPLSSFSPALQTCGGPMDIAIIVDGSNS
IYPWPPVVAFLKKLLENLDIGPDNTQASIIQYGVEPVVEFHLNAYKTKDSIIAAAANILQ
REGLETNTFRAIEFARQNAFLPGNGARPGASKVMVVVTDGESHDKNLRDDVIRKCESEKI
TRFGIAVLGYYIRNDIDTKNLIAEIKSIASTPTDRYFFNVSAEEALLEIAGSLGDRIFNI
EGTGKGGDFQMEMSQVGFSAHQTKKQNMIMLGAVGAYGWSGTVVHYTTQKSDIFPKTAFE
RILEDRNHSSLLGYSVTTLNDGSIEYYVAGAPRSNHTGQVIVYIINGKGQPTVIDSQRGD
QIGSYYGSVLCPLDVDKDGVSDLLLVGAPMFMNEQQKEIGKVHLLSFTKGILSVQGFLTG
PSPVENARFGMSISAVPDLNMDGYSDVVVGAPLEDNNKGVIYVFNGDKKRLRTQYSQKIL
GSKLDPALQYFGRSMDASSDLNDDTIPDVSVGAYGMVVQLWSRGMAVVTARATFNPDTVS
ILSKTCRVSGRLVSCFNTSVCFSATFRPKIPVGPVAIRFNLTLDAELQSSRVTSRGQFRN
SERVLQKDIRVSTGEVCETLEVFVQEAPDFVSSIGLRVDITLQDPDSSPVLDVLSPTAWE
FFIPFSKDCGSDDVCLSDLLLKLKKGEMIPSSSRMLVSFKDKRLSFTVSVTNKKENAYNT
QVTATYSKNLFFASISPPSDGTEVKCTSTKESLTLSCQVGYPALRQNQEVTFGVNFDFNL
NQLQTEADVSFEALSDSTEANPSDNQASISVPVHYDSEISLSREANLNFYVVDMDNEAKT
AVNTFNDIGPEFKFSLKVSTGNFPVSLAYLTVSLPSATARGNPLLYVTGVKTEPAGEVSC
EVTSLVNPLKISEKPYTASFSKENLMGTEDLNCKTAKCQPMKCVLKDMGIKSDFFVNVTT
RIWNGTFAASSFQSTVLTVSTEIETSEPELLVVSHKHLTVGVTISKPGVKGEVPVGVIAG
SVIGGLLLLALVIGLLWKFGFFRRKYKQLMQNTEEDEAETEALENTAE
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atggagttgaatccaaagaggactgttttgacgttgcttttgatccaatgttggagcatc
cccctgtccctatcctttaatgtggggacggcaggagccaaggtattctctggacctgcc
ctcgaggagtttggatacaccgtgaaacagttcagaaatcaccagggaaaatggttgctg
gttggttccccctggagtggatacaaccaggacaggaaaggagacatctacaagtgtgag
atcagagggtccagttcaggctgccagagactcaacttgcagaactcagtcagcatgtcg
acagtgaagaacatcaatgtcaacatgagtctagggctaaccctcacccacacagctaca
gaagataagttcatgacatgtggacctctgtgggctcagaagtgtggcagccagtattat
tacccagggatctgtgcagaagtgaaccctctcttcaaccccctgtcttcgttctcaccc
gcccttcaaacttgtgggggtccaatggatattgctattattgtggatggatccaacagt
atatatccctggccaccagttgtggctttcctcaagaaactgttggagaatttagatatt
ggaccggataatactcaggcaagtattatacagtatggggttgagccagtcgttgaattc
catctgaacgcctacaaaaccaaagactcgatcattgcggctgcagcgaacattctacag
agggaaggcctggagacaaacaccttccgcgccattgaatttgctcgacagaacgcgttc
ctgcccgggaacggggctcgacccggagccagcaaagtgatggtggtggtgacggacgga
gagtctcacgacaagaacctccgagacgacgtcatcaggaagtgtgagagtgagaagatc
acccgctttggtattgctgtccttgggtattacataaggaatgacattgacactaagaac
ctgattgcggagatcaagtccatcgccagcaccccgacagataggtatttcttcaacgta
tcagctgaggaggctctgctcgagatcgctggatctctgggagaccgcatcttcaacatt
gagggtactgggaaaggtggtgactttcagatggagatgtcccaagtgggattcagtgcc
caccaaaccaagaagcagaacatgattatgctgggtgcagtgggggcctatggctggagt
ggtactgtggttcactacaccacccagaaatcggacatcttccccaagacggcctttgag
agaatcctagaggacagaaaccacagctcactattaggctactctgtgacaacactgaat
gatggcagcatagagtactatgtggctggcgctcctcggtccaaccacactggacaggtc
atagtgtacatcatcaacggcaagggacaacccaccgtcatcgactcccagagaggagac
cagataggctcctactacggcagcgtactctgtcctctggatgtggataaagatggtgtg
tctgatctactactggttggagctcccatgttcatgaacgaacagcagaaggagattggg
aaagtccatctcctctccttcacaaagggcatcctaagtgttcaggggttcctgacgggt
ccgtccccagtggagaacgctcgttttgggatgtctatctcagcggtgcctgacctcaac
atggatggctacagtgatgtggtggtgggagccccactggaagacaacaataaaggtgta
atctatgtcttcaacggggacaagaagagactcaggacacagtattcccagaaaatcctg
ggctccaagctggaccctgcgttgcagtacttcgggaggtccatggacgccagctccgac
ttaaacgatgacaccataccagatgtctcagtgggggcttatggaatggtggtccagctc
tggtctcggggtatggctgtggtgacagcgagggcaaccttcaaccctgacacggtcagc
atcctgagtaagacgtgcagggtcagtgggaggctggtgtcctgcttcaacacctcagtc
tgtttcagcgccaccttcaggcccaagatacctgtaggacctgtggctatcaggttcaac
ctgaccctagatgctgagctccagtcgtctcgtgtcacctccagaggtcagttcaggaac
tcagagagagtcctgcagaaagacatccgggtttccaccggggaggtctgtgagacacta
gaggtctttgtccaggaggcccctgactttgtgagctcaatcggtctgcgtgtggacatc
actctgcaggacccagactccagtcctgttctggatgttctcagtcccactgcctgggag
ttctttatcccattctccaaagactgtggctctgacgatgtgtgtttgagtgacctgctc
ttgaagttgaagaaaggagagatgattcccagctcgtctaggatgctggtcagctttaag
gacaagaggctgtccttcactgtgtctgtgaccaacaagaaggagaatgcgtacaacacc
caagtcacggccacgtactccaaaaacctcttcttcgcatccatcagtcctccaagtgat
ggaacagaggtgaagtgcacctccaccaaggagtctcttaccctctcatgccaggtgggg
tacccagctttaaggcagaaccaagaggtgacatttggagtcaactttgacttcaacctg
aatcaactgcagaccgaagccgacgtgagctttgaagctctaagtgacagcacagaggcg
aacccgtcagacaaccaggcctctatctccgtccctgtccactatgactcagagatctcc
ctctccagggaagccaatctcaacttctatgtggttgacatggacaatgaagcaaagacc
gcagttaataccttcaatgacatcggtcctgagttcaaattctctctgaaggtctctaca
gggaacttcccagtcagtctggcctacctcacagtctcactgcccagtgctacagcaaga
gggaacccattgctgtatgtgacaggagtcaaaacggaacctgctggcgaagtgagctgt
gaagtaaccagcctcgtcaaccctctgaagatcagtgagaagccttacacagcatccttc
tccaaggagaacctaatgggcacagaggatctgaactgtaagacagccaagtgccagcct
atgaagtgtgtcctgaaagacatggggataaagagcgatttcttcgtgaacgtgaccacg
cggatatggaacggtacctttgctgcttcatccttccagtccactgtgctgactgtgagc
acagagatagagacctccgagcctgaactgctggtcgtctctcacaagcacctgacggtt
ggcgtcaccatcagtaaacctggggtgaaaggagaggtgcctgtaggcgttattgcgggc
agtgtgattggaggcctgcttctattggctctggtcattggcctgctttggaagtttggc
ttcttccggagaaagtacaagcagctgatgcagaacactgaggaggatgaggcagagacc
gaggcactggagaacacagcagagtga
DBGET
integrated database retrieval system