Oncorhynchus kisutch (coho salmon): 109868323
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Entry
109868323 CDS
T09179
Symbol
snx4
Name
(RefSeq) sorting nexin-4 isoform X1
KO
K17919
sorting nexin-4
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109868323 (snx4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109868323 (snx4)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oki04990
]
109868323 (snx4)
Membrane trafficking [BR:
oki04131
]
SNARE
SNARE associated proteins
Others
109868323 (snx4)
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
109868323 (snx4)
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
109868323 (snx4)
Domain-containing proteins not elsewhere classified [BR:
oki04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
109868323 (snx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
OB_YrrC
ParD_antitoxin
Motif
Other DBs
NCBI-GeneID:
109868323
NCBI-ProteinID:
XP_020313383
Ensembl:
ENSOKIG00005027214
LinkDB
All DBs
Position
LG2:complement(54846674..54861697)
Genome browser
AA seq
505 aa
AA seq
DB search
MMADSGPEEIAVIGNTDLTSAELENNIKNTMVEIEKWTSLLRKMEISVGEAEKRTGKNTV
NMQEIYTVYLIETRPVDAVTEGIIPAPDSLWRRYSEFELLRNYLLVTYPFVVVAPLPEKR
AEIVWHKLSADNMDPDFVERRRVGLENFLLRLASHPVLCNDKIFYIFLTEEKGWKEMVYE
TGFQAKADSRLKAMNAAFRVKNPDKRFTELKHYSDELQTVVSQLLRVRARVADRLYGVYK
VHGNYGRVFSEWSAIEKEMGDGLQSAGHHMDAYAASVDDILEEEEHYADQLKEYLFYTEA
LRAVCRKHELTQFELEMAAQDLASKKQQKEELVTGTVRTFSLKGMTSKLFGQETAEQREA
KLQVLEQQIEEGEEAVKEKNTESDEFVKTAWLDIEHFKDQKDRDLKEALISYAIMQISRC
KKVTRPHRYLKCIEYSACKKGNTNVDQRKGVFQQDVIFRAETGSKQTSKHAFFQGTPPGV
ASQIALYSLNSVLLLTRALWGLFTI
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgatggcagactcgggacccgaggaaatagcggtgatcgggaacaccgacctcacatcg
gcagaactagagaacaacattaaaaacacgatggtcgagattgagaaatggactagtctt
ctaagaaagatggagatcagcgttggagaggcagagaaaaggactgggaagaatacagtc
aacatgcaggagatatacactgtttacctaattgagacacggccggttgatgctgtgaca
gaaggtataatcccagccccagactccttatggaggagatacagcgagtttgagctactc
agaaactacttgttggtcacttatccctttgtcgttgttgccccattacccgagaagagg
gcagagattgtgtggcacaagctgtcagcggacaacatggacccagactttgtggagaga
aggagggttggactggagaacttcctgctccgattagcctcccacccagttctctgcaac
gacaagatcttctacatcttcctcactgaggaaaaaggatggaaggaaatggtgtacgag
acaggatttcaagcaaaggctgattccaggttgaaagctatgaatgcagcattcagggtg
aagaatccagacaaacggtttacagagctgaaacactacagcgacgagctacagactgta
gtctcccagctgctgagagtacgggcaagggtagcagatcgactgtatggggtgtacaaa
gtgcatggaaactatggacgagtcttcagtgagtggagtgccatagagaaagagatggga
gatggactacaaagtgctggtcatcacatggatgcgtatgctgcttctgtagatgatatt
ctggaggaagaggagcactatgctgatcagctgaaggagtacctattctatactgaggca
ctaagggcagtgtgcaggaagcatgagttgacacagtttgagttggagatggctgcacag
gacttagcctctaagaaacagcagaaggaggagctggtcacagggactgtgcggacgttc
tcactgaaggggatgaccagtaagctgtttggccaggagactgcagagcagagggaggct
aagttacaagtgttagaacagcagatagaggagggagaggaggctgtgaaagagaagaac
accgagagcgatgagtttgtgaagactgcctggttagacattgagcactttaaagaccaa
aaggaccgggacctgaaggaggccctgattagctatgcaatcatgcagatcagcaggtgt
aaaaaggtgacacgtccccacagatacttaaaatgtattgagtattctgcctgtaaaaaa
gggaatacaaatgtggaccaacgcaaaggagtgtttcaacaagatgtgatcttcagggcc
gaaacaggctccaaacaaacatcaaaacatgctttttttcaggggactcctcctggggtt
gcatcccaaattgcactctattccctaaatagtgtgctacttttgaccagagccctgtgg
ggtctgttcactatatag
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