KEGG   Oncorhynchus kisutch (coho salmon): 109868323
Entry
109868323         CDS       T09179                                 
Symbol
snx4
Name
(RefSeq) sorting nexin-4 isoform X1
  KO
K17919  sorting nexin-4
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:oki00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    109868323 (snx4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oki04131]
    109868323 (snx4)
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:oki04990]
    109868323 (snx4)
Membrane trafficking [BR:oki04131]
 SNARE
  SNARE associated proteins
   Others
    109868323 (snx4)
 Protein recycling
  Rab GTPases and associated proteins
   Rab4 associated proteins
    109868323 (snx4)
 Autophagy
  Cytoplasm to vacuolar targeting (CVT) pathway
   Other Cvt associated proteins
    109868323 (snx4)
Domain-containing proteins not elsewhere classified [BR:oki04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   109868323 (snx4)
SSDB
Motif
Pfam: PX OB_YrrC ParD_antitoxin
Other DBs
NCBI-GeneID: 109868323
NCBI-ProteinID: XP_020313383
Ensembl: ENSOKIG00005027214
LinkDB
Position
LG2:complement(54846674..54861697)
AA seq 505 aa
MMADSGPEEIAVIGNTDLTSAELENNIKNTMVEIEKWTSLLRKMEISVGEAEKRTGKNTV
NMQEIYTVYLIETRPVDAVTEGIIPAPDSLWRRYSEFELLRNYLLVTYPFVVVAPLPEKR
AEIVWHKLSADNMDPDFVERRRVGLENFLLRLASHPVLCNDKIFYIFLTEEKGWKEMVYE
TGFQAKADSRLKAMNAAFRVKNPDKRFTELKHYSDELQTVVSQLLRVRARVADRLYGVYK
VHGNYGRVFSEWSAIEKEMGDGLQSAGHHMDAYAASVDDILEEEEHYADQLKEYLFYTEA
LRAVCRKHELTQFELEMAAQDLASKKQQKEELVTGTVRTFSLKGMTSKLFGQETAEQREA
KLQVLEQQIEEGEEAVKEKNTESDEFVKTAWLDIEHFKDQKDRDLKEALISYAIMQISRC
KKVTRPHRYLKCIEYSACKKGNTNVDQRKGVFQQDVIFRAETGSKQTSKHAFFQGTPPGV
ASQIALYSLNSVLLLTRALWGLFTI
NT seq 1518 nt   +upstreamnt  +downstreamnt
atgatggcagactcgggacccgaggaaatagcggtgatcgggaacaccgacctcacatcg
gcagaactagagaacaacattaaaaacacgatggtcgagattgagaaatggactagtctt
ctaagaaagatggagatcagcgttggagaggcagagaaaaggactgggaagaatacagtc
aacatgcaggagatatacactgtttacctaattgagacacggccggttgatgctgtgaca
gaaggtataatcccagccccagactccttatggaggagatacagcgagtttgagctactc
agaaactacttgttggtcacttatccctttgtcgttgttgccccattacccgagaagagg
gcagagattgtgtggcacaagctgtcagcggacaacatggacccagactttgtggagaga
aggagggttggactggagaacttcctgctccgattagcctcccacccagttctctgcaac
gacaagatcttctacatcttcctcactgaggaaaaaggatggaaggaaatggtgtacgag
acaggatttcaagcaaaggctgattccaggttgaaagctatgaatgcagcattcagggtg
aagaatccagacaaacggtttacagagctgaaacactacagcgacgagctacagactgta
gtctcccagctgctgagagtacgggcaagggtagcagatcgactgtatggggtgtacaaa
gtgcatggaaactatggacgagtcttcagtgagtggagtgccatagagaaagagatggga
gatggactacaaagtgctggtcatcacatggatgcgtatgctgcttctgtagatgatatt
ctggaggaagaggagcactatgctgatcagctgaaggagtacctattctatactgaggca
ctaagggcagtgtgcaggaagcatgagttgacacagtttgagttggagatggctgcacag
gacttagcctctaagaaacagcagaaggaggagctggtcacagggactgtgcggacgttc
tcactgaaggggatgaccagtaagctgtttggccaggagactgcagagcagagggaggct
aagttacaagtgttagaacagcagatagaggagggagaggaggctgtgaaagagaagaac
accgagagcgatgagtttgtgaagactgcctggttagacattgagcactttaaagaccaa
aaggaccgggacctgaaggaggccctgattagctatgcaatcatgcagatcagcaggtgt
aaaaaggtgacacgtccccacagatacttaaaatgtattgagtattctgcctgtaaaaaa
gggaatacaaatgtggaccaacgcaaaggagtgtttcaacaagatgtgatcttcagggcc
gaaacaggctccaaacaaacatcaaaacatgctttttttcaggggactcctcctggggtt
gcatcccaaattgcactctattccctaaatagtgtgctacttttgaccagagccctgtgg
ggtctgttcactatatag

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