Oncorhynchus kisutch (coho salmon): 109868338
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Entry
109868338 CDS
T09179
Name
(RefSeq) synaptobrevin homolog YKT6 isoform X1
KO
K08516
synaptobrevin homolog YKT6
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04130
SNARE interactions in vesicular transport
oki04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
109868338
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109868338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109868338
Membrane trafficking [BR:
oki04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
109868338
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
Longin
MA3
Motif
Other DBs
NCBI-GeneID:
109868338
NCBI-ProteinID:
XP_020313396
Ensembl:
ENSOKIG00005035169
UniProt:
A0A8C7J3P0
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All DBs
Position
LG23:complement(29210287..29224994)
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AA seq
198 aa
AA seq
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MKLFSLSVLYKGTTKSNLLKAAFDLSSFSFFQKSSVQEFMTFTSDLIVQRSSIGSRASVK
EQEYLCHVYVRNDSLGAVVIADGEYPSRVCFTLLDKVLEEFSRQVSSIDWPSGSPDTVHY
TALDSYLAKYQNPREADAMSKVQAELDETKIILHNTMESLLERGEKLDDLVQKSEHLGNQ
SKAFYKTARKQNSCCEVM
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttttcagtctgagtgtgctgtataaagggaccaccaagtctaacctactgaaa
gctgccttcgacctgtcatccttcagcttcttccagaagtctagtgttcaggagttcatg
acattcactagtgacctcatagttcaacgctcgtctatagggagccgagcctctgtcaaa
gaacaagagtacctgtgtcacgtgtatgtaaggaacgactccctgggtgcggtggtgatt
gctgacggagagtatccctctagagtgtgcttcaccctactggataaggtgctggaggaa
ttttccagacaggtgagcagtatagactggccctctggttctcctgacactgtccactat
actgccctggacagctacctcgccaagtaccagaatcctcgggaggcagacgcaatgagt
aaagtacaagctgagctggacgaaaccaaaataattctgcacaacactatggaaagtctg
ttggagagaggagagaagctggatgatctagtccagaagtccgaacacctggggaaccag
tctaaagccttctacaagacggcgcggaagcagaactcttgctgtgaggtcatgtga
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