Oncorhynchus kisutch (coho salmon): 109868409
Help
Entry
109868409 CDS
T09179
Name
(RefSeq) integrin alpha-4-like isoform X1
KO
K06483
integrin alpha 4
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04510
Focal adhesion
oki04512
ECM-receptor interaction
oki04514
Cell adhesion molecules
oki04672
Intestinal immune network for IgA production
oki04810
Regulation of actin cytoskeleton
oki04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109868409
04514 Cell adhesion molecules
109868409
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109868409
09142 Cell motility
04820 Cytoskeleton in muscle cells
109868409
04810 Regulation of actin cytoskeleton
109868409
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
109868409
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oki04147
]
109868409
04515 Cell adhesion molecules [BR:
oki04515
]
109868409
04090 CD molecules [BR:
oki04090
]
109868409
Exosome [BR:
oki04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109868409
Exosomal proteins of other cancer cells
109868409
Cell adhesion molecules [BR:
oki04515
]
Integrins
Integrin alpha subunits
109868409
CD molecules [BR:
oki04090
]
Proteins
109868409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_3
FG-GAP_3
DUF5370
Motif
Other DBs
NCBI-GeneID:
109868409
NCBI-ProteinID:
XP_020313542
Ensembl:
ENSOKIG00005004923
LinkDB
All DBs
Position
LG2:55705206..55734868
Genome browser
AA seq
1023 aa
AA seq
DB search
MERKTPGNLSCCWSFLLAYFWCCNLTECYNLDVDHPISFSGPNGSLFGYSVLLHKNQKNT
WLLVGAPVANSSSYPAVKKPGAIYKCSISDKRECQQISTGVDSCGKTCFSESDNQWLGVS
LSRQPRDGHVLACGHRWKNVFYSRKENQNKLPHGVCYRYEADLKQSQPLIPCYKDHQRKF
GEDYGSCQAGISNFLTEDLIIMGAPGTSYWTGSVLVYNTSSRVLSAYVDDSSTVLYGSYL
GYSVGAGHFLHPDSTEIVGGAPQHGQTGKAYLFRAEENMLKIISEVKGSKLGSYFGASVC
AVDLNGDGLSDLLVGSPMYSTVREEGQVHVYINQGAANMKEAEFQLVGSNSYAARFGETI
TDLGDIDDDGFADVAVGAPQEEELRGAIYIYNGRKTGISQTFSQRITGSVLGNDLKMFGQ
SVSGAIDVDENGYQDVAVGAFLSDSAVVLRTRPVIVVEAFMPLPVSVDRYVALCSDNGLP
AVCINATVCFRVHARHFTSSIVLQYNLTADTQHKESFPSRFHFHGNGTSNATTGRVKTRH
DQLTCVPHQAFIRKDVRDIFTPIHFEVSYTLREHTVHNGGSTFPALKPILQQRGGHSNLV
ANKTEFARYCSLANCSTNLQVSAQLVLPQRHNNMPYFAVGNGKTIMLNTTLVNTGDDAFL
PRLQLRFPSNLHYIKVLDAEEKFVSCDFSEENKTIVGVDCSVGNLYLSSGAKVNISFLLD
VNQSSSVGDVSISINASGDNYENEDLLHDNSATLMLPLRYGVDVNIHGFMTPTSFVFGDQ
APIPVDCYTETFNYTYKVVNIGPSKSLNTIVEIDIPKILSPYPYRLLHVTDFHTSLGECS
IRNDSIAVEDDCEVPQSSFIKELVFFFSKTSKRKMFCAYGDDLCLTLECRLGDMDIGKEA
TIHMEVKLNPTVLQLSPGRHGVMLMESTGVITSPREDPQTIILQKIPIAQVVLEAHFSQK
PQAAVEVFIIVVSLLVGLLILALLIFALWKIGFFKRQFKKEDEIRRDSWDYVPKHLTKTE
SRS
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atggagcgaaaaacgccgggcaatctttcttgctgttggagctttcttctcgcgtacttc
tggtgctgtaatctcaccgagtgttacaatttggatgtagaccaccccattagtttcagt
ggaccaaatggatctttatttggatattctgtattgttacacaagaaccagaaaaacaca
tggttattagtcggagctccagttgcgaattcatcttcctacccagccgtaaaaaaacca
ggagcaatttataagtgcagcatctcggacaagagagaatgtcaacaaatatcaacaggt
gtggacagttgtgggaagacatgcttctctgagagtgacaaccagtggctcggagtcagc
ctgtccagacagcctcgtgatggccatgtattggcatgtgggcatcgttggaagaacgtg
ttctattccaggaaagaaaaccagaacaagctgcctcatggtgtctgttacagatacgag
gctgacctcaaacagtctcaaccactcatcccatgctacaaagatcaccaacggaagttt
ggtgaggactatggatcatgccaagcagggatatccaactttctgactgaggacttgata
attatgggagccccagggacatcgtactggactggatctgtcctggtctacaacacctcc
agcagggtcctgtctgcctatgtggatgacagcagcactgtcctctatggcagttacctg
ggctactcggttggggccggccacttcctccaccctgactccacagagattgttggcggt
gcgccccagcacgggcagactggtaaggcctacctattcagagctgaagaaaacatgctg
aagataatcagtgaagtcaagggcagcaagctcggctcgtattttggtgccagtgtgtgt
gctgtggacctgaatggagatggcctgtctgatctactggtaggatctcccatgtacagc
accgtgagagaggaaggacaagtccatgtctacataaaccaaggagccgctaatatgaag
gaagcagagtttcagttggtgggaagcaactcgtatgctgccagatttggggagaccata
actgatctgggagatattgatgatgatggctttgctgatgtggcagtgggggctccgcag
gaagaagagctgcgtggggctatatatatctacaatgggaggaaaacagggatctctcag
accttctctcaaaggatcactggctctgttctgggtaatgatttaaagatgttcggccag
tctgtgtcaggagccatcgatgttgatgaaaacggttaccaagatgtagcagtaggggcc
ttcctctcagactcagctgttgttctgaggactcgtccagtaatagtggtagaagccttc
atgcccctgcctgtcagtgtagaccgctatgtagcgctgtgttctgacaacggtcttcct
gctgtctgcatcaatgctacagtctgcttcagggtccatgctcgacacttcacctcttca
atagtgctccagtataatctgacagcagacacgcagcacaaggagtccttcccctcacgt
ttccatttccacggaaacgggacgtccaacgctacaacagggcgggtcaaaaccagacac
gaccagctgacctgcgtcccccaccaggccttcataaggaaagatgtcagagatatcttc
acacccatccattttgaggtttcgtacaccctcagagagcacactgtccataacggagga
tccactttccctgctctgaaacccatactgcagcagagaggggggcacagtaacctggtg
gccaataagacagagtttgctcggtactgttcattggccaactgctcaaccaatctgcag
gtctctgctcaactggtgttaccacagagacacaacaacatgccgtactttgcagttggc
aatgggaagaccatcatgttgaacacaaccctggtgaacacgggagatgatgcattcctc
cccagactccagctccgattccccagtaacctgcactacatcaaagtgcttgacgcagag
gagaagtttgtgagctgtgacttttcagaggagaacaagacaatagtaggagtggattgc
agtgtgggaaacctatacctcagctctggggccaaggtcaatatcagttttctgttggat
gtgaaccagagtagtagtgttggtgacgttagcatctccatcaacgctagtggggacaat
tatgaaaacgaggatcttctgcatgacaactctgccactctgatgttaccactgagatat
ggagtagatgtcaacattcatgggtttatgactccaacatcctttgtatttggtgaccag
gcacctattccagttgattgctacacagagacattcaactacacttacaaggttgtcaat
attggtccaagcaaatctctcaacacgatagtggagattgatattcccaagatcctgtca
ccatatccatacagattactccacgtcacagacttccatacgtctcttggagaatgctcc
attcgaaacgactccattgcggtggaggatgactgtgaggtgccacagtcctctttcatc
aaagaactggtcttcttcttctccaaaaccagcaaacgcaaaatgttctgtgcctatggt
gatgacctgtgcctgactctggagtgtagactaggagatatggacattgggaaagaagcc
accattcacatggaagtgaagctgaatcctaccgttctacagctctcacctggacgtcat
ggagtgatgctgatggagagtactggcgtcatcacatcaccaagggaggaccctcaaacc
atcatcctacagaagatccctatcgctcaggttgtgttggaggcccacttcagccagaag
cctcaggcagcagtggaggtgtttatcattgtagtgagtctactggtgggactcctgatc
ctagccctgctcatcttcgccctctggaagattggtttctttaaaaggcaatttaagaag
gaggatgagatcaggagggatagctgggactatgtaccaaaacatttgactaagactgag
agtagatcctaa
DBGET
integrated database retrieval system
