Oncorhynchus kisutch (coho salmon): 109868451
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Entry
109868451 CDS
T09179
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B isoform X2
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04010
MAPK signaling pathway
oki04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109868451
04020 Calcium signaling pathway
109868451
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109868451
Ion channels [BR:
oki04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
109868451
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
109868451
NCBI-ProteinID:
XP_020313616
Ensembl:
ENSOKIG00005031196
LinkDB
All DBs
Position
LG23:complement(24475407..24689386)
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AA seq
2357 aa
AA seq
DB search
MARFAEGLPTRFGAGAGGGGRGAPGAGRGGARAGGPPGGQRMYKQSMAQRARTMAIYNPN
PVKQNCFTVNRSLFIFREDNLIRKYAKRITEWPPFEYLILATIIANCIVLALEQHLPAND
KTPMSERLDDTEPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILATV
GSDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGMLLFFAILMFAIIGV
EFYMGKFHSTCFTVDTGERAAAFPCGTEAPARMCPNGTECTEYWIGPNYGITNFDNILFA
VLTVFQCITMEGWVDILYNANDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKER
ERVEKRQDFLKLRRQQQIERELTGYLEWICKAEEVLLEEEDENAEEKSPLDVLKRGKVKK
SKNDLIGAEEGEDHFTDMSSVAPPGSPFGRASVKSSKLESSSYFRRKERRMRFFIRRMVK
AQSFYWIVLCLVGLNTLCVAIVHYDQPEWLTTALYLAEFVFLGLFLSEMSLKMYGLGARN
YFHSSFNCFDFSVIIGSILEVVWSMIKPGASYGISVLRALRLLRLFKFTKYWNSLRNLVV
SLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEEETPTTNFDTFPAAILTVFQIL
TGEDWNAVMYHGIESQGGVRRGMFSSVYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTK
DEEKQEEEANKKLALQKAMEVKEVSPMSAANISIAAFVKQNRDALSRSSSVSSVHSPKEQ
QRANKIMSVWEQRTNQLRRNNLRASSEALFNELDPEERLRVSSALHLRSDMKTHNDRPLV
VEPGNGDNPRPPEEDRDGADPQQEGGDPHVPQPRKHYRHRERNGEHGESRHHTHHSRSRD
HYHPDGPRSKEGKVERNHSPEGGKGRRHHHQAGSPEEGVNGGGEGREDRHHHSDRQGNGA
LATRDRLESRGRGHREENGERRKHRSRRVRAQSTLDGDECRENGERNGDRDQGHRDRQTD
SQGESLATSPVQPPTGLQAGEKQEDADNQKNRHRASQAGLNSNTVHIPVTITAPSRETTI
IPMDNIDCESLPRNEEKKDLEEELKNGPKHILPYSSMFVFGQTNPVRRLCHYVVNLRYFE
MCILSVITMSSIALAAEDPVQANAPRNNVLKYLDYVFTGVFTFEMVIKMIDLGLLLHPGS
YFRDLWNILDFIVVSGALVAFACSGTKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFD
CVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKFFYCTDESKGLEKDCRGKFLDYDGDE
VAAQDREWKKYEFHYDNVLWAFLTLFTVSTGEGWPMVLKHSVDATYEDEGPSPGFRMETS
IFYVVYFVVFPFFFVNIFVALIIITFQEQGDKAMSECSLEKNERACIDFAINAKPLTRYM
PADKQSFQYKMWQFVVSPPFEYSIMTMIALNTVVLMMKFHGAPELYEAMLKHLNIVFTAL
FTLECILKIIAFGPLNYLKAAWNVFDFVTVLGSITDILVTEIKTDKLINLSFLRLFRAAR
LIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIELNEESAINH
HNNFQTFFQALMLLFRSATGEAWHEIMLSCLSNRPCDKLSGSGGKECGSDFAYFYFVSFI
FLCSFLMLNLFVAVIMDNFEYLTRDASILGPHHLDEFVRVWAEYDPAACGRMTYLDMYEM
LRHMSPPLGLGKKCPPRIAYKRLVKMNMPIADDNTVHFTSTLMALIRTALEIKLASGVLA
QRLCDSDLRKEISRVWPNLPPKTIDLLVTPYKNDEFNELLCPFAVVNRELTVGKVYAALM
IFDYYKQNRAKRLEQQLGLDFTGTIKNKKGPAFFCPMPMNHMQEEGTTVSRANPLPSSQP
EPESQAEPTPSTTSLTNGEAVPSTRSPIKESGEQLSQEGQRTSSRKRILQRGQSEDVPYS
NKPQESVEMRQVENGADIGGYSGLDDHGRAASMPRLDSQYNRNHPRHLPGTYLAPIADIS
PIRRSASTLASQCHREMSLRDYTLGRPSQAQAQASSAPGQAQDRPHHHHHHRCHRRRDKD
RDKKQKSLDRATSVQPSSTACSSVDPLVEGLTRERARERDRGRPHEKRHHSAAGETKRYY
SCERYVGREHCHTKSAGPSRSTSPGETHDLGLLKQSIRMSKGSQVVLTFGSSPSCRGRRQ
LPQTPLTPRPAVAYKTGNSLPMQFGSTGHQSFLGRGLSERNALLESPPIPVTLIGLDPNL
SPCPRNTPPCRLPEEPDDFQDAVSDHGGSHSPRIIASASHGAGIPNGYHFTLGVNAVSSS
SPRGTGSFHEKEEDDWC
NT seq
7074 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcttcgcagaaggtctacccacccgctttggagctggagcaggtggaggaggc
agaggtgcgcccggcgcaggcagagggggcgcccgggctggtggtcctccaggcggccaa
aggatgtacaagcagtcgatggctcagagagccaggacaatggccatatacaaccctaac
cctgtcaaacagaactgcttcactgtcaaccgatccttgttcatctttcgagaggacaat
ctcattaggaagtatgctaagcgaataaccgaatggcctccgtttgagtatttgatcctg
gccaccatcatcgccaactgcatcgtactggccctggagcagcacctaccagccaatgac
aagacccccatgtcagaacgtctggatgacacagagccctactttattggaatattctgt
ttcgaggctggcattaagattatcgccttgggctttgcatttcacaaaggctcgtacctc
cgcaacggctggaacgtaatggactttgtggtcgtcctcactgggatcctggccacggtg
ggctcagactttgacctgaggactctgcgagcggtgagagtactgagaccactcaaactg
gtgtctggcatccccagtcttcaggtggttttgaagtctatcatgaaggccatggtgcct
ctgctccagataggcatgctgctcttcttcgccatactcatgtttgccattatcggagtg
gagttctacatgggcaagttccactccacctgcttcactgtcgacactggtgagcgagca
gcagcgttcccctgtggtacggaggccccagccaggatgtgtcctaatggtacagagtgt
acagagtactggatcggccccaactacggcatcaccaactttgacaacatcctgtttgcc
gtgctcaccgtcttccagtgcatcaccatggagggatgggtggacatcctctacaatgct
aacgatgcctcagggaacacctggaactggctctacttcatccccctgatcatcatcgga
tccttcttcatgctcaacttggtcctgggtgtcttatcaggggagtttgccaaagaaaga
gagcgtgtggagaagaggcaggactttctaaagctgcgcagacagcagcagatagagaga
gagctgacaggatacctggagtggatatgcaaggcagaggaggtgctgctggaggaggag
gatgagaacgcggaggagaagtcccctctggacgtgttgaaacgaggcaaggtaaagaag
agtaagaatgacctgattggtgctgaggagggagaggatcacttcactgacatgtcctct
gttgcccccccaggctctccgtttggccgggccagcgtgaagagcagtaagctggagagc
tcgtcctacttccgccgcaaggagaggagaatgcgtttcttcatccgtcgcatggtcaaa
gcccagagcttctactggatagtactatgtctggtgggcctcaacacactgtgtgtggcc
atcgtccactacgaccagcctgagtggctcaccactgccctctacctggcagagtttgtg
ttcctgggtctgttcctctctgagatgagcctgaagatgtatggcctgggagccaggaac
tacttccattcctctttcaactgcttcgactttagtgtgataatagggagtatacttgag
gtggtgtggtctatgatcaaaccaggggcatcctatggcattagtgtgctgagggctctt
cgtctgctcaggttattcaaatttaccaagtactggaactccctgaggaacctggtagtg
tctcttctcaactcaatgaagtccattatcagcttgctcttcctcctcttcctcttcatc
gttgtctttgccctgctgggcatgcagctcttcggaggacagtttaattttgaagaggag
acgccgacgaccaacttcgacactttcccggcggccattctcaccgtcttccagattttg
actggcgaggattggaatgcagtgatgtatcatggtattgagtcccaggggggcgtacgg
cgagggatgttctcctcggtctacttcatcgtcctcacactctttggaaactacacgctc
ctgaatgtcttcttagctatcgccgtcgacaacctcgccaatgcacaggagctcaccaag
gatgaggagaagcaggaggaagaagccaataagaagctggccctgcagaaagccatggag
gtgaaggaggtcagccccatgtcagcagccaacatctctatcgctgcttttgtaaagcaa
aatcgagatgcactctctcgcagctcgtccgtctccagcgtgcattcacctaaggagcag
cagagagccaataagataatgtcagtgtgggagcagcgcaccaaccaactgcgtcgaaac
aacctgagagccagctccgaggctctgttcaacgagctggacccagaggagcgtctgcgg
gtctcctccgccctccacctgcgctccgacatgaagacgcacaacgaccgccccctagtg
gtggagccaggtaacggggacaatccccgaccccccgaggaggacagagacggagcagac
ccccagcaagagggaggagacccccacgttccacagccacgcaagcactaccgtcaccgg
gagaggaacggggagcatggggagagcaggcatcacacccaccacagccgcagtagggac
cactaccacccagacgggccccggtccaaagagggcaaggtggagaggaaccatagtcca
gagggggggaagggccgcaggcaccatcaccaggctggatccccagaggagggggttaac
ggagggggagagggaagggaagaccgccaccaccactccgacagacaggggaacggggcc
ctggctaccagggacagactggagagcaggggccggggccacagggaggagaacggagaa
aggaggaagcaccgctcacgcagagtcagggcccagtcaacactggatggagacgagtgc
agagagaacggagagagaaatggagacagggaccaaggacacagggacaggcagaccgac
tctcaaggggagagcttggccaccagtcctgtgcagcctcctacaggtctgcaggctgga
gagaagcaagaggatgctgacaaccagaagaacagacacagagccagccaggcaggcctg
aacagcaacactgtccacatccctgtcaccatcaccgccccatccagagagaccaccatc
atacccatggataacatagactgtgagagcctcccccggaacgaggagaagaaggacttg
gaggaggagctgaagaacggccccaaacacattctcccctacagctccatgtttgtgttt
ggacagaccaacccggtgcgtcggctgtgccactatgtggtgaaccttcgttactttgag
atgtgtatcctgtcggtcatcaccatgagcagcatagccctggctgctgaagaccctgtg
caggccaatgcaccacgcaacaacgtactcaagtatctggactacgtcttcacaggagtg
ttcacctttgagatggtgattaagatgatagacctgggactgctccttcatcctggttct
tacttccgggacctgtggaacatcctggactttattgtggtcagtggagctctggtggcg
ttcgcctgctcaggaactaaaggcaaggacatcaacaccatcaagtctctcagggtgctg
cgagttctaagacctctgaagaccatcaaacgcctgccaaaactcaaggccgtgtttgac
tgtgtggtcaactctctgaagaacgtgctcaacatcctcattgtctacatgctcttcatg
ttcatcttcgctgtgatcgctgtgcagctgttcaagggcaagttcttctactgcaccgac
gagtctaaaggtctggagaaggactgcaggggtaagtttctggactatgacggtgatgaa
gtggcggcccaggatcgtgagtggaagaagtatgagttccattatgacaatgtgctgtgg
gccttcctcaccctattcaccgtctccaccggggagggctggccaatggtcctaaagcat
tctgtggatgccacctatgaggatgagggtcccagcccaggcttccgtatggagacctct
atcttctatgtggtctactttgtggtctttcccttcttctttgtcaacatctttgtggct
ttgatcatcatcaccttccaggagcagggagacaaggccatgtcagagtgtagtctggag
aagaacgagagagcttgtatcgactttgccatcaacgccaagcctctgacgcgctacatg
ccagcagacaagcagtcgttccagtataagatgtggcagtttgtggtgtcgccgcccttt
gagtactccatcatgaccatgatcgcactcaacactgtggtgctgatgatgaagtttcac
ggtgctccggagctgtatgaggccatgctgaagcacctgaacattgtgttcacagctctc
ttcacactagagtgcatcctcaagatcatcgctttcggaccactgaattacttgaaggca
gcttggaacgtgtttgactttgtgacagtattggggagtatcactgacatcttggtcaca
gagattaagacggacaagctgatcaatctgagtttcttgaggctgttcagggcggccagg
ctcatcaagctgctgaggcagggctacaccattcgcatcctgctatggacctttgtccag
tccttcaaggccctaccttacgtctgcctcctcatcgctatgctcttcttcatctacgcc
atcatcggcatgcaggtgtttggaaacattgagctgaatgaggaatcagccatcaatcac
cacaacaacttccagaccttcttccaggctctgatgcttctgttcaggagtgcaacaggt
gaggcgtggcatgagatcatgctgtcgtgtctgagtaaccgtccgtgtgataagctgtca
gggtccggagggaaggagtgcggcagtgactttgcttatttctactttgtctccttcatc
ttcctctgctccttcctgatgctcaatctgtttgtggcggtcatcatggacaactttgag
tacctgaccagagacgcctctatcctggggcctcaccacctggacgaattcgtccgtgtt
tgggccgagtacgaccctgctgcctgtggccgtatgacctacctcgatatgtacgagatg
ctccgtcacatgtcccctccactaggtttgggaaagaaatgcccgcccagaatcgcctac
aagcgattggttaagatgaacatgcccattgctgatgacaacacggtgcacttcacgtcc
actctgatggcgctcatccgcactgctctggagatcaaactggcgtctggagtcctggcc
cagcgtctgtgtgactctgacctgaggaaagagatctccagagtctggcccaacctgcct
ccgaagactatcgacctgctggtcacaccatataaaaatgatgagttcaatgagctactt
tgcccctttgcggttgtaaaccgagagctgacagtggggaaggtctacgctgccctcatg
atctttgactactacaagcagaaccgggccaagagactggaacagcaactgggactggac
ttcacagggacaattaagaataaaaagggcccagccttcttctgccccatgcccatgaac
catatgcaggaggaggggacaacagtctccagagccaatcccctgccatcctcccaacct
gaaccagagtctcaggcagagcccacgccatccaccacctctctaaccaatggggaagca
gtaccaagcactagaagtcccataaaagagtcaggagagcaactgtctcaggagggccaa
cggaccagcagtagaaaaaggattctacagagaggccagtcagaggacgtgccctactcc
aacaaacctcaggaatcagtggagatgaggcaggtggagaacggtgctgatatagggggc
tactctggtctggatgaccatggcagagcagcctccatgccaagactggactcccagtac
aatcggaaccaccctcgtcacctacctgggacctacctggcacctattgctgacatcagt
cctatcaggcggtcggcgtccacgttggcttcccagtgccaccgggagatgagtctgaga
gactacaccctggggcggcccagccaggcccaagcccaggcctcctcagccccaggtcaa
gcccaggacaggccccaccaccatcaccaccaccgctgtcacagacgcagggacaaggac
agggacaagaagcagaagtcgcttgacagggcaaccagcgttcagccttctagtacagca
tgttcgtctgttgacccccttgtggagggcttgaccagggagcgggcgagggagcgtgac
cgcggccggcctcatgagaagaggcaccactctgcagccggggagacgaagcgttactac
tcctgtgagcgctacgtaggcagggagcactgccacaccaagtcagctggccccagccgc
tccacctcccctggagagacccacgacctaggcctcttgaagcagagtatcaggatgagt
aaaggcagccaagtggtcctaacctttggatctagcccatcctgccgtgggcgcagacag
ctcccccagacccccctgaccccccgccccgccgtggcctacaagactggaaactccttg
cccatgcagtttggttccacagggcaccagtcctttctcggtcgtggactctcggagcgt
aacgccctgctggagtcaccccccatacccgtcaccctcattggcttagacccaaacctg
agcccctgtccgcggaacaccccaccatgcagactccctgaggagcctgacgacttccag
gatgctgtgagcgaccatggagggagccactcccctaggatcattgcctcagcctcccat
ggggctgggatcccaaacgggtaccacttcactcttggggtcaatgccgtttcaagctcc
agccccagagggactgggagttttcatgagaaggaagaggatgactggtgctag
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