Oncorhynchus kisutch (coho salmon): 109868454
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Entry
109868454 CDS
T09179
Name
(RefSeq) rab GTPase-activating protein 1 isoform X2
KO
K20284
Rab GTPase-activating protein 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109868454
Membrane trafficking [BR:
oki04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
109868454
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3694
PID
PTB
UPF0242
ERM_helical
Ig_mannosidase
Motif
Other DBs
NCBI-GeneID:
109868454
NCBI-ProteinID:
XP_020313625
Ensembl:
ENSOKIG00005033193
LinkDB
All DBs
Position
LG23:4035347..4188988
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AA seq
1155 aa
AA seq
DB search
MDDKASVGKISVSSDSVSTLNSEDFVLVSRLGDDTPGSSTNNGSDDEKTGLKIVGNGSEH
QLQQELEDVLMDPSVAEQALGGGVPSGGGVEDVLMDPSVAEQALGGGVPSGGGVEDVLMD
PSVAEQALGGGVPSGGGVEDVLMDPSVAEQALGGGVPSGGGVDQAGGVDHVFSPTMAAPP
EPQLCPDPLGTPAKVEMVLPVQSAAQESELNERSYRGDESSSECSPSTPIPDEDSVVFNK
LTYLGCASVNAPRSEVEALRMMTILRGQCQLPLDVTLSVPGVSEGTVRLLDPQTSTEIAS
YPIYKILFCVRGHDSTPESDCFAFTESHYNAEIFRIHVFRCEIQEAVSRILYSFATAFRR
SSKKTLLSGMAPPLTPDSDVFTFTVSLEIKEDDGKGTFSAVAKDKDKNSFKLRPGMDKKI
VIYVQQTSNKELAIERCFGLLLSPGKNVKNSDMHLLDLESMGKSSDGKSYIITGSWNPNT
PQFQAVNEETPKDKFMYMTTAVDLVITEVEEPVRFLLETRVRVCSPNERLFWPFSKRNYT
ETYYLKLRQMERKSNNDTLYEVLSLESESERERKKTTASPNILQSSSHGSMVPSPPEDDE
EEDNDEPLLSGSGDVSKECAEKILETWGDLLSKWHLNLSVRPKQLPALVRSGVPEALRGE
VWQLLAGCHNNDHQVEEYRTLITKESPQDSAITRDINRTFPAHDYFKDTGGDGQDSLYKI
CKAYSVYDEEIGYCQGQSFLAAVLLLHMPEEQAFSVLVKIMFDYGLRELFKQNFEDLHCK
FFQLERLMQEYIPDLYNHFLNVGLEAHMYASQWFLTLFTAKFPLYMVFHIIDLLLCEGIS
VIFNVALALLKTSREDLLATDFEGALKFFRVPVPKRYRSEENAKKLMELACSMKISQKKL
KKYEKEYHAMREQQEQQEAPIERYERENRRLQEANMRLEQENDDLAHELVSSKIALRKDL
DNAEEKADALNKELLMTKQKLVDSEDEKRRLEEESAQLKEMCRRELDKSESEIKKNGSII
GEYKQICSQLSERLEKQQAANKGELEKIRLKVEGCEKCSILFSKEGRLKAARKLKEGSEE
ETDEEKEALKNQLREMELELAQTKLQLVEAECKIQDLEHTLGLALNEVQAAKKTWFNRTL
TSIKTATGAQGKETT
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaaggcctcggtggggaaaattagcgtgtcgtccgactccgtgtccaccctg
aacagtgaggactttgtgctggtgtcgcggctgggggacgacaccccaggctcctccact
aataacggtagtgatgacgaaaagaccggactgaagattgtggggaacggcagtgagcat
cagttgcagcaggagctggaggatgttctgatggacccttctgtagctgagcaggcgctg
ggtggtggcgtccccagtggtggcggcgtggaggatgttctgatggacccttctgtagct
gagcaggcgctgggtggtggtgtccccagtggtggcggcgtggaggatgttctgatggac
ccttctgtagctgagcaggcgctgggtggtggtgtccccagtggtggcggcgtggaggat
gttctgatggacccttctgtagctgagcaggcgctgggtggtggcgtccccagtggtggc
ggcgtggaccaggcaggcggggtagaccatgttttctcccccaccatggcagcaccaccc
gagccccaactgtgccctgaccccctcggcaccccggccaaagttgagatggtgctcccc
gtccaatctgcagcgcaggagagtgagctgaatgaacgatcttaccgcggggatgagtcg
tcatcggagtgcagccccagtacgcccatcccagacgaggacagtgtggtctttaataag
ctgacctacctgggctgtgcctcggtcaacgctccccgcagtgaggtggaagcgctccgt
atgatgaccatactcagagggcagtgccagctacccctggacgtcaccctgtctgtgcct
ggagtctcagagggcaccgtcaggttgctggacccccagacaagcacagagatagccagc
taccccatctacaagatcctgttctgtgtgcggggtcacgacagcacgccagagagtgac
tgcttcgccttcacggagagccattacaacgcagagatcttccgcatccatgtcttccgt
tgtgagatccaagaggcggtcagcaggatactgtacagcttcgccacggcctttaggcgg
tcctccaagaagacactcctctcgggcatggctccgcccctgactccagacagcgacgtc
ttcaccttcaccgtcagcctggagatcaaggaggatgatggcaaagggacctttagtgct
gtggcgaaagacaaagacaagaacagcttcaagctgcgtccgggaatggacaagaagatc
gtcatctacgttcaacagacgtctaataaggagctggccatagagaggtgcttcggcctc
ctgctgagtccagggaagaacgtgaagaacagtgacatgcacctgcttgacctggagtcg
atggggaagtcctctgatgggaagtcctacatcatcacagggagctggaatcccaacaca
cctcagttccaggctgttaacgaggagacacccaaagataagttcatgtacatgacgacg
gcggtggacctggtgatcactgaggtggaggagccggttcgtttccttctggagaccagg
gtcagagtctgctctcccaacgagaggctattctggcccttcagcaaacgcaactacacc
gagacctactacctgaaactcagacagatggagcgtaagagtaacaacgataccctgtac
gaggtgctgagcctggagagtgagtcagagagggagaggaagaaaaccacagccagccca
aacatcctgcagtcttcctcccacggctccatggtgccatcgcctcccgaggatgatgag
gaggaagacaatgacgagccgttgctgagtggctcgggagacgtgtcaaaggagtgtgct
gagaagatcctggagacctggggagacctgctgtccaaatggcacctgaacttgtcggtg
cgtcccaagcagctcccggcgttggtacgtagtggcgtaccagaggccctcaggggagag
gtatggcagctcctggccggttgccataacaatgaccaccaggtagaggagtaccgcacc
ctcatcaccaaggagtctccccaggacagtgccatcaccagagacatcaacaggactttc
ccagctcacgactatttcaaggacactggaggagacggacaagactcactctacaagatc
tgcaaggcctattcagtgtatgatgaggagattggctactgccaggggcagtctttcctg
gctgcggtgctgctgctgcacatgcctgaggagcaggcctttagtgtcctggtcaagatc
atgtttgactatggactcagggagctcttcaagcagaactttgaggatctacactgcaag
ttcttccagctggagcgactcatgcaggagtacatcccagacttgtataaccacttcctg
aacgtgggtctggaggctcatatgtacgcctctcagtggttcctcacgctcttcacagcc
aagttccccctctacatggtgttccacatcatagacctgcttctctgtgagggcatcagt
gtgatcttcaatgtggctctggctctcctgaagacctcgcgagaagacctgctggcgact
gactttgaaggggcgctcaagttcttccgagtcccggttcccaaacgctaccgctcagag
gagaacgctaagaaacttatggaactggcctgcagcatgaagatcagtcagaagaagctg
aagaagtacgagaaggagtaccacgccatgagagagcagcaggaacagcaggaagctccc
attgagagatacgagagggagaaccgtcgtctccaggaggctaacatgcgtctggagcag
gagaatgatgacctggcccatgaactggtcagcagcaagatcgccctgcgcaaggacctg
gacaacgctgaggagaaagcagacgctctgaacaaggagctgttgatgaccaaacagaag
ctggtggattcggaggacgagaagaggcggctagaggaggagtctgcgcagctgaaagag
atgtgtagacgggagctggacaaatcagagtctgagataaagaagaacggttccatcata
ggagagtacaaacagatctgctcccagctcagtgagcgtctggagaaacagcaggcagcc
aacaagggagagctggagaagatccggctgaaagtcgaaggctgtgaaaagtgctccatc
ctgttcagcaaggagggtcgtctgaaggcagcgaggaagctgaaggagggcagtgaggag
gagacggacgaggagaaggaggctctgaagaaccagctccgagagatggagctggaactg
gcccagaccaaactacagctggtggaggcagagtgcaagatacaggacttggagcacacc
ctgggtctggctctcaacgaggtccaggctgctaagaagacctggttcaacagaacctta
acctccatcaagactgcgacgggagcacagggcaaggagaccacctaa
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