Oncorhynchus kisutch (coho salmon): 109868481
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Entry
109868481 CDS
T09179
Name
(RefSeq) tetratricopeptide repeat protein 28 isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oki03037
]
109868481
Cilium and associated proteins [BR:
oki03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
109868481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_8
TPR_2
TPR_10
TPR_MalT
TPR_16
RPN7
TPR_17
TPR_11
TPR_NPHP3
TPR_14
TPR_9
PUB
Motif
Other DBs
NCBI-GeneID:
109868481
NCBI-ProteinID:
XP_020313664
Ensembl:
ENSOKIG00005021330
LinkDB
All DBs
Position
LG23:9466842..9567941
Genome browser
AA seq
2629 aa
AA seq
DB search
MEKHRPKKERFSLFGPRSSTRATNPPSSSSSSSTSARPIPPPLCQTDPHPCIPPGPTILS
KAEFLEAVRRSNQACQLGQYSLAVQLYGEALSADPQNCILYSNRSAALLHLGQYQTALDD
ALKARLLNPKWPKAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSP
LRDSLEPTYHQLQRMKLDKSPFVVVCVIGQELLTAGYHGASVVVLEAGLKIGTCSLKARQ
FVCLCLCVCVSMCVMIIEFLLSSRFFLKLRGSVFSALSSAYWSLGNAEKSTGYMQQDLEV
AKTLGDQSGECRAHGNLGSAYFSKVNYREALTNHRHQLVLAMKLKDREAASAALSSLGHV
YTAIADYPNALASHKQCVLLARQTQCPLSEARQLGNMGAVYTALGDFTNAMQCHQQHLDI
AKTLGNGAEEARAYSNLGSAHHSQRDFDKAVSYHTLVLQLAQELEDRTIEMRAYAGLGHA
ARCMQDLERAGQYHQQQLDIAEELQDRAAQGRASSNLGIIHQMKGEYDAALKLHKAHLCL
VQELGDYAAQGRAYGNMGNAYNALRMYDQAVRYHRQELHISLEVNDRPSQASTHGNLAVA
YQALGAHDQALQHYLHHLTIARELRDTQSTARALGNLGNFHCCRGEYAPAVPYYQQYLTL
SPQLQDLEGEGKVCHNLAYTHYCLGQYREAVRYYEQDLALAKDLGDKLSQAKAYCNLGLA
YKALGEYSKAEDCQRYLLSLAQALNNTQAVFRALGNLGDVCVCRGDVAGAVRFYQQQLTL
AQEVKEHKMEADAYSALGSAHRLLRQYDLALSFHQQELSARTALDDQRGQCGALGRLAAV
HMALTDYPTAFQCYQAQLTLTQGLRDACVEAQVQGNMGIAKMNMGVLEEAIGYFEQQLAM
LEQLSGAECVLDRGRAYGNLADCYDSLGDFEEAIKYCEMFLTVAQSLNHVQDQERAYRGL
GNAHRSLGSLQQALVCFEKRLVVAHELGGSGGGEGGSGGRKAQAQAYGELGDLHSQLGNY
EQALSCLEHQLNIASTAGDRALEGEASGALGGVYQLMGENETALQWHQRALEIAEETGSV
RSQGRAYGNLGLTYEELGNYERAVACQEQHLSVAAQNNDLTAKTLAYGSLGRTHHALQNY
TQAVMYLQEGLRLAEQCGRREEEARIRHRLGLSLWASSNLEEAQNQLYRASALFESIRHE
AQLSSDYRLTLFDLQTSSYQALQRILVSLGHYDEALAVAERGRTRAFADLLVERQQGHQP
LTSDPYTPTPDPYSPVTIEHILNTVNSQKSLVLYFSLAAGYLYSWLLAPGTGIVKFHEVY
LGEGGAELQASEIQGGGVSGCQTLEQHITAAREALGVDDYYSSGEAESEAGDLLEQQFEE
RLSSASDPTGYLRMVSRNNLFNRDSRSSSCLVSSTVSPVSETPSLPCRPPPSPLGKPPLR
ALHHLLIAPMEGVLMPSSGAVGRHRQLVLVLEGELYLVPFALLKGSSSNEYLYERFNLLA
VPSLGSLGPVAKSYPRRGAPFLYNGGGSMTAVVGAPRLPSRVMERWLWGPLPSAHDEALR
LGELLGCQPLTGTQATKDRVIAAMGQAECVHFATHVSWKLAALVLSPSQDPGMDSGTRPK
ESAPCGGSLSSETGDVGARTEQREDGSEDGGSVCDAESVCDSPPLQEFLLTAADILDLRL
PIKLVVLGSYQECVSRVTADGVVGLTRAFLAAGVQCVCVSLWPVPMAASKVFTHTFYTAL
LNGTKASVALTEAMKTLQSSTHFSHPSNWAGFMLIGCDVKLNSPSSLIGQALAEILQYPE
RARDSLRVLLHLVEKSLQRIQSGQSNAMYTLQQSVENKVGGVPGWQALLSAVGFRLDCPG
TGSGLPAAVFFPMADPGDRLQLCSTTLQSLLGLPHSAFQALSKLVIAAETGEQLINKLHQ
VLVQQQTCDKEQEFSLAPIQVSISVQLWRLPGCHEFLAALGFDLCEAGQEEVLLKTGKQA
CRRTMHFALQSLLALFDSTELPRRLSLDSSSSLESLSSSQCASVPLNLPQPPFSPPLGGP
DSLSCDAISLYSLSSLASSLSFLSRPEPAGSDVISQRSRQQELERHRGGVSQRHTGDVSR
NRLTNHRGVGGGTEGEDKYEGFSIISSEPLGGGGRECDTLPFPGGHRHIRGAWRGGAAGR
GYPVSISSKGSVSTPTSPLKVLPLPLAIPPSPNTHVKSQGSQSLSEGQVVSTEAVLSESD
QSSTETDSTVKSQEDKPPFTPLDPQELATRILEETQSHMQALESLQRGRTGRAGNGGGEK
GLRGQECTPSSTLAPLNPTGGGLGFRSSESSAFSRPSSRASLQARASPLSLSSPLSPLPA
TLSPLPATLSPISTPLLSTRPKPPSRCSSLQKISSGYNSPALSSLSSSLSFSHPHPSPSR
TPDPHIHAQLRLKYPSSPYTPHISHSPNSISISPSSGHPSPAGSLLSLAASPALSLAPSP
ALSLAPSPALSYSSTGSTASRSSLAETPGLRRLKQAGLVDERVQAIHNLKTFWSNATQRQ
EVPGPGRVLRDGGKKMSTVQKDVLGLLHLSPRHGSNNKNQDAEGPQSPINPLNGHRMLGS
KPPVAPPPQTATDSSRGGSPGAPPHPVRLPSGNGFKFPSPGKFFPSSKC
NT seq
7890 nt
NT seq
+upstream
nt +downstream
nt
atggagaaacatcgaccgaagaaagaaaggttctcactcttcggccctcgctcttctacc
cgcgccaccaaccctccttcttcctcctcttcgtcctctacctctgctcgccccatccct
ccccctctctgccagacagaccctcatccttgcatccctcccgggccaacaatcctttct
aaggcagagtttctggaggcagtacgtcgcagtaaccaggcatgccaactggggcagtac
agcctggcagtgcagctctacggggaggccctgtctgctgaccctcagaactgcatcctg
tacagtaaccgctctgcggcccttctccacctgggacagtaccagaccgccctggacgac
gccctcaaagcccgcctgcttaaccccaaatggcccaaggcatacttccgtcagggtgtg
gccctgcagtaccttggtcgccatgccgacgccctggcagcgtttgcctctggtctagcg
caggaccccaagagtctccaactactggtgggcatggttgaggctgccatgaagtcccca
ctacgagactctctagaacccacctaccatcagctgcagaggatgaagctggacaagagt
ccgttcgtggtggtgtgtgtgattggtcaggagctgctgaccgctggttaccacggcgcc
tcagtggtggtcctggaggcggggctaaagatcggcacatgctctctgaaggcaaggcag
tttgtgtgtctgtgtctgtgtgtgtgtgtttctatgtgtgtgatgatcattgagtttctt
ctttcttctcggttctttctgaagctccgaggttcagtgttctctgctcttagctcagcc
tactggtcgctaggcaacgcagagaagagcacaggatacatgcagcaagacctggaggtg
gccaagacgctaggtgaccaatcaggcgagtgccgagctcacgggaacctaggctctgcc
tacttctccaaggtcaactacagggaggctttgaccaatcacagacatcagctggtcctc
gccatgaaactcaaggacagagaggctgcgtccgctgcactgagcagccttggccatgtg
tacacagcgatcgcggactatcccaacgccctggccagccataagcagtgtgtgctgttg
gcacggcagacccagtgcccgctgtcagaggctcgccagctgggcaatatgggcgctgtc
tacaccgcactgggagacttcaccaacgctatgcagtgtcatcagcaacacctggatata
gctaagaccctgggtaatggtgctgaggaggcgcgggcgtacagtaacctgggcagtgcc
caccacagccagagagactttgacaaggctgtgtcctaccacacactggtgctgcagctg
gctcaggagctggaggacaggactatagagatgagggcttacgccggcctgggacatgct
gctcgctgcatgcaggacttggagagggcaggccagtaccaccagcagcagctggacata
gcggaggagctgcaggacagagctgcacagggacgagcttcatccaacctgggtataatc
catcagatgaagggggagtacgatgcagcgttgaagctccacaaggcccacctgtgtttg
gtccaggagctgggggactatgctgctcagggcagggcctatgggaacatgggaaatgcc
tacaacgctctgaggatgtatgaccaagctgtacgctaccaccggcaggaactgcacata
tcactcgaggtgaatgaccgtccctcccaagcctctacccatggtaacctggctgtagct
tatcaggcgctgggtgctcacgaccaggctctccagcactacctgcaccacctgaccatc
gcacgcgagctacgagacacgcagagcacggccagggcactaggtaacctgggtaacttc
cactgctgtagaggggagtatgccccggcggttccgtactaccagcagtacctgaccctg
tcacctcagctacaggacctggagggagagggcaaggtctgccacaacctggcctataca
cactactgcttgggacagtacagggaggccgtcaggtattatgagcaggacctggccctg
gctaaagacctgggtgataagttgtcccaggctaaagcctactgtaacctgggtctggcc
tacaaagccctgggggaatatagcaaggctgaggactgtcagagatacctgctgtccctg
gctcaggctctgaacaacactcaggcagtgttccgtgccctgggaaacctgggggatgtg
tgtgtgtgtcggggtgacgtggccggggcggtgaggttctaccagcagcagctcaccctg
gctcaggaggtcaaagaacacaaaatggaggctgacgcctactcagcgctaggctctgcc
cacagactcctccgtcagtacgacctggccctgtccttccaccagcaggagctgtctgcc
cgcactgctctagacgaccagcgggggcagtgtggtgctctgggccgcctggcagccgtc
cacatggccctgacagactaccccacagccttccagtgttaccaggcccagctcaccctg
acacagggcctcagagatgcctgcgtggaggcacaggtccagggcaacatgggcatcgcc
aagatgaacatgggcgtcctggaggaggccattgggtattttgagcagcagttggccatg
ctggagcagctgagtggggctgagtgtgtgctggatagaggcagggcctacgggaaccta
gcagactgttatgactctctgggagactttgaggaagctataaagtactgtgagatgttt
ctgactgtggctcagagtctcaaccatgttcaggaccaggagagagcctacaggggactg
ggtaacgcacacagatctctaggtagtctccagcaggccttggtgtgttttgagaagcgt
ctggtggtggcccatgagctgggcggatcgggaggtggagagggaggaagtggaggaagg
aaggcccaggcccaggcatatggggagctgggagacctacacagccagctggggaattat
gaacaagccctatcctgcctggagcatcaactcaacatcgcctccaccgcaggggaccgg
gcactagagggcgaagcgagcggggcgttgggtggagtgtaccagctgatgggagagaat
gagacagctctacagtggcaccagagggcattagagattgcggaggaaacaggaagtgtg
aggagtcaggggagggcctacgggaacctgggattgacctatgaggagctgggaaactac
gaaagggctgtggcctgtcaggagcagcacctgagtgtggcagcgcagaataatgacctc
acagccaagacactggcgtatggcagcctggggaggacacaccatgcgctacagaactac
acacaggctgtcatgtacctgcaggaaggtctgcgtttagcagagcagtgtgggaggaga
gaggaggaggctaggatccgtcatcgtctgggcttgtcactgtgggccagcagcaacctg
gaggaggcccagaaccagctgtaccgagcttctgccttgtttgagtcgattcggcatgaa
gcccaactcagctcagactacaggctgactctgtttgacctgcagacatcatcataccag
gctctccagaggatcctcgtcagcctgggtcattatgacgaggccctagccgtggcagag
cggggtcggacccgggcgttcgccgacctcctggtggagcgacagcagggtcaccaaccc
ctgacctctgacccttataccccgacccctgacccttactccccggtaaccatagaacac
atcctgaatacggtcaacagtcaaaagtcactggtgctgtacttttctctggccgcaggg
tacctctacagctggctactggcaccaggcacaggtatagtgaagttccatgaggtgtac
ctgggtgagggaggagccgagctgcaggcttcagagattcaggggggaggagttagtggc
tgccagactctggagcagcacatcactgcagctagagaggctctgggagttgacgactac
tacagcagcggtgaggcagagagcgaagcgggtgatctgttggaacagcagtttgaggaa
cggctgagctcagccagcgacccgacaggctacctacgcatggtttccagaaacaacctc
ttcaacagggatagtaggagttcttcctgtctggtcagttctacagtgtctccagtgagc
gagaccccctctctaccctgtagacccccacccagccccctcggcaaaccccccttacga
gcacttcaccacctgctcattgcacctatggagggggtgctgatgcccagtagtggtgca
gtgggcagacatagacagctggtgttggtgttagagggagagctgtacctggttcccttc
gctctgctcaaaggtagctcttctaatgagtacctgtatgagaggttcaaccttctagct
gtcccatctttagggagcctggggcctgtagctaagtcctaccctcgtcgcggggctccc
ttcctctacaacggtgggggttccatgactgcagtagtaggggctccacgcctgccctcc
agggtgatggagcgttggctgtggggtccgctgccctctgcccacgacgaggccctccgc
ctgggggaactgctgggctgccagcccctcactggaacacaggccaccaaggaccgtgtg
atagcagccatgggccaggcagagtgtgttcactttgctactcatgtctcctggaagctg
gcggccctggttctctcccccagccaggatccagggatggactcgggaacacggcccaag
gagagtgcaccgtgtgggggatcgctttcaagcgagactggggatgttggagcaaggact
gagcaacgggaggacgggagcgaggacggaggaagtgtgtgtgatgcagagagtgtgtgt
gacagtccaccacttcaggagtttctgctcactgcggcagacatactggacctgagactg
cctatcaaactggtggtgctggggtcgtaccaggagtgtgttagcagggtgacagctgac
ggggtggtgggtctgacccgtgccttccttgcagcgggggttcagtgtgtgtgtgtgtca
ctgtggcccgttcccatggcagcctccaaggtgttcacacacaccttctacacggcgcta
ctgaatgggaccaaggccagtgtagctctcactgaggccatgaagactctacagagcagc
acacacttttcacacccttctaactgggcgggcttcatgctgattggctgtgatgtgaag
ctgaacagcccctcgtctctgattggacaggctctggcagagatcctccaataccctgag
agggctagagactccctgagagtacttttgcacctggttgagaagtctctccaacgtata
cagagtggtcagagtaatgctatgtacaccttgcagcagagtgtggagaacaaggttggt
ggcgtaccgggatggcaggccctgctgtcagccgtggggttccggttagattgtcccggt
accggcagtggtctccccgctgctgtcttcttccctatggccgaccctggagaccggctg
cagctctgcagcaccactctgcagtcactactaggtctgcctcattcagcattccaggcc
ctctctaaactggtcattgctgctgagactggagaacagctaatcaacaagctccaccag
gtattggttcagcaacagacatgtgacaaagagcaggagttctcattggctcccatccag
gtatccattagtgtccagctgtggagacttcctggttgtcatgagttcctggctgcgctg
ggttttgacctgtgtgaggcaggacaggaggaggtgctattgaagactggtaaacaggct
tgcagacggacaatgcactttgctctgcagtctctactggcactgtttgactccacagag
ctccccagacgcctcagcctggacagctcttcatctctagagtctctctcctcctctcag
tgtgcctccgtcccccttaacctcccccagcctcccttctcgcccccgcttggcggccca
gacagtctctcatgcgacgccatctccctctacagcctcagctccctcgcctcctctctc
agcttcctgtcccgccctgaacccgcaggaagtgatgtcatcagccagcgttcgcggcag
caggaactggagcggcaccgcggaggtgtctctcaacgacacacaggagatgtgtcgaga
aacagattaacgaatcacagaggagtaggcggagggacagagggggaggataagtatgaa
ggattctctatcatcagcagtgagcctctgggaggaggggggagggagtgtgacacctta
cccttccctgggggacacagacacattagaggagcatggaggggaggggcggcagggagg
gggtaccccgtctcgatctcctccaaggggagtgtcagcactcctacctcaccgctcaaa
gtcctccccctgcccctggccataccccccagccctaacacacacgttaagtcccagggc
tctcagagcttgtctgaaggtcaggtggtcagtacagaggcggtcctctcggagtctgac
cagtccagtacagagacagacagcaccgtcaagtcccaggaagacaagccacccttcacc
cctctggacccccaggagctggccaccaggatcctggaagagacccagagccacatgcag
gctttggagagcctccagagggggaggacaggaagggcaggcaatgggggaggggagaag
gggctaagaggacaagaatgtacaccctcctccaccttagcccccctgaaccccactgga
ggtggtttgggcttccgttcgtctgaatccagcgctttcagcagacccagtagtagagcc
agcctacaggcccgggcttcacctctctccctctccagccctctctcacccctccctgcc
actctctcacccctccctgccactctctcacccatctccacccctctcctctccaccagg
cccaaacccccctctcgttgctcgtccttacagaagatcagctccggctacaacagcccg
gccctatcctccctctcttcctccctctctttctctcacccccacccctcaccctccaga
accccagacccccacatccatgcgcagctcagacttaaataccccagctccccttacacc
ccgcacatctcacactcccccaatagcatctccatctcccccagctcaggccacccttct
ccagccggcagcctcctgtccctggccgcctccccagccctctccctggccccctcccca
gccctctccctggccccctcccctgccctatcctactcctctacaggctctaccgcgtcc
cgctccagcctggctgaaacccctggcctgcgccggttgaaacaggcaggcctggtggac
gagagggtccaggccatccacaacctgaaaaccttctggtccaatgccacccagaggcag
gaggttcccggcccaggcagagtgctccgagatggggggaagaagatgagcacggtccag
aaagatgtcctggggcttctccacctctctccaagacatgggtccaacaacaagaaccag
gacgctgaggggccccagagccccatcaacccgcttaacggacatcgaatgctgggttca
aaaccaccagtggcgcctcctcctcagactgctactgactcctccaggggaggtagtcct
ggagcacccccacaccctgtcagactgccctctgggaatggcttcaagttcccctcgcct
gggaagttcttcccctcctctaaatgctga
DBGET
integrated database retrieval system
