Oncorhynchus kisutch (coho salmon): 109868565
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Entry
109868565 CDS
T09179
Name
(RefSeq) AP-3 complex subunit beta-1 isoform X1
KO
K12397
AP-3 complex subunit beta
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
109868565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109868565
Membrane trafficking [BR:
oki04131
]
Endosome - Lysosome transport
Others
AP-3 complex
109868565
Endosome - Golgi transport
109868565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP3B1_C
AP3B1_C_2
Cnd1
HEAT_2
HEAT_GCN1
INTS1_R4
TPR_CAND1
SEEEED
Motif
Other DBs
NCBI-GeneID:
109868565
NCBI-ProteinID:
XP_020313798
Ensembl:
ENSOKIG00005019349
LinkDB
All DBs
Position
LG23:complement(27115780..27211334)
Genome browser
AA seq
1125 aa
AA seq
DB search
MNGHRGFSVLRSEAAGAVRTALVSAENLQLTLKTELSQEEQHLTPHTHTNGGPDETHTKG
YCTEVNEDLKEMLESNKESLKLEAMKRVVGLIAKGKNASELFPAVVKNVASKNIELKKLV
YVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEA
ASDMSPYVRKTSAHAIQKLYSLDQDQKELLIEVIEKLLKDKSTLVAGSVVMAFEEVCPDR
IDLIHKNYRKLCNLLVDVEEWGQVVIISMLTRYARTQFTSPWKEDGVFDEHNERAFYESD
EEKTRDETEAKPYMMDPDHRLLLRNTKPLLQSRNTAVVMSVAQLYWHLAPKNEVSIVTKS
LVRLLRSHREVQYIVLQNIATMSIQRKGMFEPYMKSFYVRSTDATHIKSLKLEILTSLAN
EANISTILREFQTYVKSQDKQFAAGTIQAIGRCATNISEVTDTCLNGLVLLLSNRDETVV
AESVVVIRKLLQIQPTQHSDIIKHMAKLFDNITVPMARASILWLMGEYCERVPKIAPDVL
RKMAKSFTSEEDIVKLQTVNLAAKLYLTNSKQTKLLTQYILNLGKYDQNYDIRDRTRFIR
QLIVPNDKNGALSKYAHRILLAPKPAPVLESAYKDRDRYQLGTLSHTINTKASGYLELSD
WPAVAPDQSVRNVEVIEPVKEWAPSLGKTVKSKPAKSSDDKFYSDSGEEEEKGSGSSSSE
DGSSSSSSEESGSDAESHVQKNSSQTSEESDKSSSQSEKSSSESDSEKKERKTKTPLQKK
TVKPTAKDCDSDENGNVAKEANSSSAEESSSDSESDSDTHTDSDSGTEHKKKTKSKAKPK
VEVKSTKDVSLLDLGDFTPAPVTQHKSSVLSPSLLGDLEGLSLSNVSSTIQLSGPAFVPE
KSHDLLHRMTGKGLSAQYQFPRQPCLYQPTMVSVQISLTNTTDHPLEQIHIGDRSPTGLN
IHCFNTIECLEPEASVTVFMGIDFNDSTQAANFQLCTKEDHFSVSIQPAIGELLLPITMT
ELDFRKEQGKLLGMNESSATITMAAENMTSQPISRPVATVANLGMVPSSQDNVHRFAGKT
ANSGAVVLVTVELRGESTALITINTEKSVMGSMLLRDLKLALAQA
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtcaccgaggtttctctgtgctgcgttctgaggcagcaggggctgtgaggaca
gctctggtgtctgctgagaacctccagctcaccttaaagactgaactcagccaggaggag
cagcacctcacaccccacacacacaccaatggaggccccgatgagacacacaccaaaggg
tactgtacagaagtgaatgaagaccttaaagagatgcttgagagcaacaaggagtcgctt
aaactggaggccatgaagagggttgttgggctgatcgcaaaggggaagaatgcctctgag
ctgttcccagcagtggtgaagaacgtggctagtaagaatatagagctgaagaagttggtg
tatgtgtacctggtgaggtatgcagaggagcagcaggacctggctctactgtccatcagc
acctttcagagggccctcaaggaccctaaccagctgatcagagccagtgctctcagggtt
ctgtccagtatcagagtcccaatcatcgttcccatcatgatgctggccatcaaggaggct
gcctccgacatgtccccttacgtcaggaaaacatccgcccacgccatccagaaactctac
agcctggaccaggatcagaaggagctcctgatagaagtcattgagaaactgctgaaggac
aaaagcacattggtagcaggcagcgttgtgatggcctttgaggaggtgtgtccggaccgt
attgacctgatccataagaactaccgtaaactctgtaacctgctagtggacgtggaggag
tggggtcaggtggtcatcatctccatgttgacacgctacgccaggacacagttcaccagc
ccctggaaagaggacggtgtgtttgatgagcacaatgagagggcgttctatgagtctgat
gaggaaaagactagagatgagacggaggccaagccctacatgatggaccctgaccacaga
ctgctgctcaggaacaccaagcctctactacagagcagaaacactgccgtggtgatgtct
gtagcccagctgtactggcacctggctcctaaaaacgaggtcagcatcgtcaccaaatct
ctggtcagactgctcagaagccacagagaggtgcaatacattgtgttacagaacatagcc
accatgtccatccagagaaagggcatgtttgaaccttacatgaagagtttttatgtgaga
tccacagatgccactcacatcaaatcactcaagctggagatcttgaccagcctggccaac
gaagccaacatctccaccatccttagagagttccagacctatgtgaagagccaggacaag
cagtttgctgccggtaccatccaggccataggcaggtgtgccaccaacatctctgaggtc
acagacacctgcctcaatggactggtgctgctgctctccaacagagacgagacggtggtc
gcggagagtgtggtggtgatcaggaagctgctccagatccagcccacccagcacagtgat
atcatcaaacacatggccaaactctttgacaacatcactgtgccgatggcgcgggccagc
atcctgtggctaatgggagagtattgtgagagggtccctaagatcgcccctgacgtcctc
cgcaagatggccaagagcttcacctccgaggaggacatcgtcaagctccagactgtcaac
ctggctgccaaactctacctcaccaactccaaacagactaagctgttgacccagtacatt
ctgaacctggggaaatatgaccagaactatgacatcagagaccgcacgcgattcatccgc
cagctcattgtgcccaatgacaagaacggagcgctcagcaagtacgcccaccgcattctg
ctggcgcccaaaccagcacctgtcctcgagtctgcctacaaagaccgcgatcgttaccag
ttgggaaccctgtcccacaccatcaacaccaaagccagtggctacctggagctctctgat
tggcccgccgtggctcctgaccaatcagtgaggaatgtggaggtgattgagccggtgaag
gagtgggctccatctctagggaagactgtgaaatccaagcctgccaagtcatcagatgac
aagttctactctgactctggagaggaggaggagaagggatcagggagcagtagcagtgag
gatggcagtagtagtagtagtagtgaagagtcaggcagcgatgcagagagccatgtccag
aagaacagcagtcagaccagtgaggagtcagacaagtcctccagccaatcagagaagagt
tccagtgaatctgactctgaaaagaaggagaggaaaactaagaccccactacagaagaag
acagtcaaaccaaccgccaaagactgtgattcggatgagaatgggaacgttgctaaagaa
gccaacagttcgtctgcagaagagagctcctctgactcagaatcagactctgacacccac
acagactctgactcaggcaccgaacacaagaagaagaccaagtctaaagccaaacccaag
gtggaggtgaagtcaacaaaggacgtgtctctgttggatctgggtgacttcactcctgca
ccagtgacccagcacaagtcttctgtcctctctcctagccttctaggagacctggagggc
ctgtcactctccaatgtctcctccaccatccagttgagcggtccagcgtttgtcccagag
aagagccatgacctgctgcaccgtatgacaggtaaaggtctgtcagcccagtaccagttc
cccagacagccctgtctctaccagcccaccatggtctcagtccagatcagcctgaccaac
accacagaccaccctctggaacagatccacattggagacaggagccccacaggactcaac
atacactgcttcaatactatagagtgtctggagccagaggcctcagtgactgttttcatg
ggcatcgacttcaacgactcaacacaagcagccaacttccagctgtgtacaaaggaggac
catttcagtgtgtccatccagcctgccataggggaactcctcctgcccatcaccatgact
gaactggacttccgcaaggagcaaggtaaacttctgggcatgaacgagagctcggcaacc
atcaccatggcagcagagaacatgaccagccaaccaatcagcagaccagtggcaaccgtg
gccaacctgggaatggttccatccagtcaagacaacgtccacaggtttgctggtaagacg
gccaatagtggagctgtggtgctggtgacggtggagctgaggggggagtctacagccctg
atcaccatcaacacagagaagagtgtcatgggctccatgctgctccgagaccttaaactg
gccctggcccaggcctag
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integrated database retrieval system
