Oncorhynchus kisutch (coho salmon): 109868593
Help
Entry
109868593 CDS
T09179
Name
(RefSeq) TBC1 domain family member 8-like isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109868593
Membrane trafficking [BR:
oki04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
109868593
Endosome - Golgi transport
Rab GTPases and associated proteins
109868593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
PH-GRAM_MTMR6-like
EF-hand_1
Ty3_capsid
Motif
Other DBs
NCBI-GeneID:
109868593
NCBI-ProteinID:
XP_020313858
Ensembl:
ENSOKIG00005017695
LinkDB
All DBs
Position
LG2:56359655..56384636
Genome browser
AA seq
1145 aa
AA seq
DB search
MWLNPEEVLLKNALKLWVTEKSNEFFLLQRRRGHGDTGGKFTGLLVGALDSVLDSNARVT
PFRILLQMPGSQVSWTIACGAAVGEMNRHWDWLVQNLLHSLSVFENKEDVASFVKGKVKG
LIAEEVRGRQAAQEEEPEKFREALLKFELCFGLPSSEKLVTTYSCCCWKGRVPRQGWLYL
SINHMAFYSFLLGKEVKFVIPWAEVTRLERVSTGLMTDMVRVMTRRCQLDFSMFLSLDEA
FGVIGQLADIALRRLLDSEGLELDRVLQQSSNITKRVLEEQALRTYVLALFRLPRGERLQ
EVALCSVWTPHARCHTTGTLFTTDSYLCFASRDEGHCSLLIPLSEVISIEKAESTSLLPN
PVIVSVRSKKAFQLIELQDRDSLVDGLTSRLRALQWKHSMFRSKKSLTSSSPYYTFCYDT
MYCDGEDIEERAQRQTVNTEALMACYHHSQPDPNNSTATMEQVKERLWEDHFPEYGRGVH
MFRTEKIQKLVAMGIPESLRGELWMTFSDASSELASHPGYYSGLVTESMGQSSLATEEIE
RDLHRSLPDHPAFQNVKGIAALRRVLTAYAHRNPKIGYCQSMNILASVLLLYTKEEEAFS
LLVAVCERMLPDYFNRRVIGAQVDQSVFEELIRDRLPELAEHIPDLSPLSSISLSWFLTL
FLSVLPFRSAVCVVDCFFFHGIKAIFQLGLAVLDANATALCASADDSQALMILTGFLDQV
KYDEDPSPPTPHPSQSGEEEGRPPVKQHTLITDLIADSYEKFGDLTVRQIEKLRCRHRIQ
VLQAHEDTTKENALRVVTPDVSLSPENLADVYDLFKTEHFINLYWGDGGTTLALQHHDPG
RPYVEQYRVDRVQFKSLYMLLVPWLCGFHTDTVAHRTFTLLDQDRDSLITFREFAGWLDT
LYFEELNEKVRLLYRLHIPPALTESEDDPSPLKSPQLSTTRPLHVELPNAPDVCVHVEGE
MRDFQEQLKQMLKDLAKEKEKDVEQPVPPMNQREFIQFCKTLYSMFHGNPDENELFQAIA
TVTSLVLQIGEVGHRSRCSGSEVSSEGGAGDEVEDDHREGSQEDHPVFSTEEDGERKEGT
SKSSGSESQSEWAVSYAQILASLLTEQQLVNFFEKPMDLSAKVAEAKVKQYHERAGLLML
QQGTS
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgtggttgaatccggaggaagttttgctgaaaaatgcattgaagctttgggttaccgaa
aaatctaacgaattcttccttttgcagcgcagaagagggcatggagacacaggggggaaa
tttacaggtcttctggtgggagctctggactcagtgctggactccaatgcccgggtcaca
ccgttccgtatcctactacagatgcctgggtcacaggtcagctggacaatagcttgtggt
gctgctgtcggagagatgaacagacattgggactggctggtccagaacctactccactct
ctctcagtgtttgagaacaaggaggatgttgccagcttcgtaaaagggaaagtcaagggt
ctgatagcggaggaggtaagggggaggcaggcggctcaggaggaggagcctgagaagttc
cgggaggcgctactgaagtttgagctatgtttcggcctgccctcctcagagaagctggtc
accacctactcctgctgctgctggaaggggcgggtcccccggcagggctggctctacctc
agcatcaaccacatggccttctactccttcctgttgggaaaggaagtgaagtttgtgatc
ccgtgggcggaggtgacgaggctggagcgggtctctacgggtctcatgacggacatggtg
cgtgtgatgacgcggcggtgccagttggacttctccatgttcctgagcctggatgaggcg
tttggggtcattggtcagctggctgacatcgccctgcgacgcctgctggacagtgaaggc
ctggagctggaccgagtcctccagcagtcctccaacatcaccaagagggttctggaggag
caggcattaaggacgtatgtcctggctctatttcggctaccacggggcgaacgtcttcag
gaggtggcgctgtgttcagtgtggacgccccatgcccgctgtcacacgacaggaacactc
ttcaccaccgacagctacctatgcttcgccagccgagacgagggccactgcagcctgctt
atccctctctcagaggtgatctccatagagaaggcggagagtaccagcctgctgccgaac
ccagtgatcgtcagcgtgaggagtaagaaggccttccagctgatcgagctgcaggacaga
gacagcctggtggacggcctgacatcacgcctcagagccctccagtggaaacactccatg
ttccgcagcaagaaatctctgacctcctcgtctccctactacaccttctgctatgacacc
atgtactgtgacggggaggatatcgaggagagagcacaacgtcaaacagtgaacacagag
gctctaatggcatgctaccatcactctcaacctgaccccaacaacagcacggctaccatg
gagcaggtgaaagagcgtctatgggaggaccacttcccggagtacggtcgaggcgtccac
atgttccgcacagagaaaatccaaaagctggttgccatggggataccagagtcgctacgg
ggagagctatggatgaccttctctgatgcctcatcagagttggcatcccacccaggctac
tactcggggctggtgacagagtctatggggcaaagcagtctggccacggaggagatcgag
agagacctgcaccgctctctgccagaccaccccgccttccagaacgtcaaaggcattgcc
gcgttgcgccgtgtcctcaccgcatatgcccaccgcaaccccaagattggctactgccag
tcgatgaatatcctggcatctgtgctgctactgtacactaaagaggaggaggccttctca
ctgctagtggctgtgtgtgagagaatgctacctgactacttcaaccgcagagtcataggt
gctcaggtggaccagtcagtgtttgaagagctgatccgggatcgtcttcccgagctggcc
gagcacattcccgacctctcccccctctcttccatctccctgtcctggtttctcaccctc
ttcctcagcgtgcttcccttccgcagcgctgtctgtgtggtagactgcttcttctttcac
ggcattaaagccatcttccagctggggctagctgtgctggatgctaacgctacggcactg
tgtgctagtgcagatgacagccaggcactcatgatcctcactggttttctggaccaggtg
aagtacgatgaggatccatctccccctacccctcacccgtctcagagtggggaggaggag
ggcagaccgcctgttaaacaacataccctgatcactgacctcatcgctgactcctatgag
aaatttggagacctgacggtgagacaaatagagaagttgcgatgcagacaccggatccag
gttctccaagcacacgaggacaccaccaaggagaatgcgctcagggtggtgaccccagat
gtctctctctcccctgaaaacctggctgatgtctacgacctcttcaagacagagcacttc
atcaacctgtactggggcgatgggggcaccacattggccctccagcaccatgacccaggc
cggccctatgtagagcagtacagagtggaccgggtccagtttaagagcctgtacatgctg
ctggttccctggctttgtggctttcatactgacaccgtggcccaccggaccttcacacta
ctggaccaggacagagactcactcatcaccttcagagagttcgctgggtggctggatacg
ctatactttgaggaactgaatgaaaaggtcagactactgtatcgtttgcacatacctcca
gctctgactgaaagtgaggatgacccatctccactgaagagccctcagctgtccactacc
agaccactccatgtagagctgcccaatgctcctgatgtgtgtgttcatgttgaaggggag
atgagagactttcaggaacagttgaaacagatgttgaaagacctggctaaagagaaggag
aaggatgtggagcaacctgtacctccaatgaaccagagggagttcatccagttctgtaag
accctctacagcatgttccatggcaacccagacgagaatgagctctttcaggccatcgct
acagtgaccagcctggtgctgcagatcggcgaggtcgggcaccgcagccgctgctcaggg
tcagaggtcagcagcgagggtggggccggggacgaggtagaggacgatcacagggagggg
agtcaagaagaccatcccgtcttcagcaccgaagaagacggagagagaaaggaggggacc
agcaagagttcagggtctgagagtcagagcgagtgggcggtcagctacgctcagatcctg
gcttctctcctcacagaacagcagctagtcaacttctttgagaaaccgatggacctgtca
gcaaaggtggctgaggcaaaagtgaaacagtaccatgaaagggctggtctgcttatgctc
cagcaagggaccagctga
DBGET
integrated database retrieval system
