Oncorhynchus kisutch (coho salmon): 109868658
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Entry
109868658 CDS
T09179
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04137
Mitophagy - animal
oki04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109868658
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
109868658
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109868658
03009 Ribosome biogenesis [BR:
oki03009
]
109868658
04131 Membrane trafficking [BR:
oki04131
]
109868658
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oki04147
]
109868658
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
109868658
Ribosome biogenesis [BR:
oki03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
109868658
Membrane trafficking [BR:
oki04131
]
SNARE
SNARE associated proteins
Others
109868658
Autophagy
Aggrephagy
Other aggrephagy associated proteins
109868658
Exosome [BR:
oki04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109868658
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_33
AAA_5
AAA_2
TIP49
AAA_22
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
nSTAND3
AAA_28
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
ResIII
NB-ARC
TsaE
NACHT
Sigma54_activat
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
Zot
DUF3944
Motif
Other DBs
NCBI-GeneID:
109868658
NCBI-ProteinID:
XP_020313959
Ensembl:
ENSOKIG00005035117
LinkDB
All DBs
Position
LG23:complement(32978749..33001054)
Genome browser
AA seq
892 aa
AA seq
DB search
MSTATPIGACVRKFTLAIYSDFRALSSVPERRITDEFTNTFSARWLSRVNLRTHLELAVG
VALTEEKHTRRGRNQVLFVGHTKRSTMASGGESKNDDLSTAILKQKTRPNRLVVDESLNE
DNSVVSLSQAKMDELQLFRGDTVLMKGKKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRV
RLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLV
RGGMRAVEFKVVETDPNPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGVRKQLA
QIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEI
MSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDG
LKQRAHVIVMAATNRPNSIDAALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLSDDV
DLEQVANQTHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRW
ALSQSNPSALRETVVEVPNISWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGV
LFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVL
FFDELDSIAKARGGNAGDGGGAADRVINQILTEMDGMSSKKNVFIIGATNRPDIIDPAIL
RPGRLDQLIYIPLPDEKSRINILGANLRKSPIAKDVDLDFLAKMTNGFSGADLTEICQRA
CKMAIRESIENEIRRERERQTNPSAMEVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRK
YEMFAQTLQQSRGFGSFRFPTNSAPGAGPSQGSAGGSGGTVFNEDNDDDLYG
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccgcaacgccgatcggagcgtgcgttcgtaaattcactctggctatctactcc
gatttcagagcactctcgtctgtgccagagcgcagaataactgatgaatttacgaacaca
tttagcgctcgctggctctccagagtgaatttacgaacgcacctagagttagctgttggt
gttgcactcactgaagagaaacacacgagaagaggaagaaatcaggttttatttgttgga
cataccaagcgaagcaccatggcttcaggaggagaatcgaaaaatgatgatctatccaca
gcgattttaaagcaaaagaccaggcctaaccggttggttgtggatgaatctctcaatgag
gacaacagtgtggtctcgctgtctcaggccaagatggacgagttgcagctgttcagggga
gacacagtgctgatgaaaggaaagaagagacgggagacggtctgcatcgtgctctctgat
gacacctgctccgacgagaaggtccgcatgaacagagtggtccgcaacaacctaagagtc
cgcctgggagatgttatcagtattcagccatgcccagacgtgaagtacgggaagcggatc
cacgttctgcccattgatgacactgtggaggggatcacagggaacctgtttgaggtctac
ctcaagccctacttcctggaggcctacaggcccatcaggaaaggggacatcttcctggtg
aggggaggcatgcgagctgtggagttcaaggtagtggagacggaccccaacccctactgc
attgtggccccagacacagtcatccactgtgagggggagcccatcaaacgagaggatgaa
gaggagtctctgaatgaggttggctatgatgacattggtggtgtgaggaagcagctggcc
cagattaaggagatggtggagctgcccctgagacacccagcactgttcaaggccatcggc
gtcaagcctccaaggggaatcctgctgtacggaccccctggaacaggaaagactctgatc
gcccgtgctgtggcgaatgagactggagccttctttttccttatcaatgggcctgagatc
atgagtaaactggccggagagtctgagagtaacctgaggaaggccttcgaggaggctgag
aagaatgcccctgccatcatcttcattgatgagctggacgccattgcaccaaaaagagaa
aagacacacggtgaggtggagaggcgtatcgtgtcccagctcctcacactcatggacggc
cttaagcagcgtgctcacgtcatcgtcatggcagccaccaacagacccaacagcattgac
gccgccctcaggcgatttgggcgttttgacagggaggtggacattggcattcctgacgca
acaggcagactggagatcctccagatccataccaagaacatgaaactgtccgacgatgtc
gacctcgagcaggttgccaatcagactcacggccacgtgggtgctgacctggctgctctg
tgctctgaagccgccctgcaggccatcaggaagaagatggatctcatcgaccttgaggac
gagaccatcgacgcagaggtcatgaactcccttgccgtcaccatggacgacttcagatgg
gctctgagccagagcaacccatctgccctgagagagactgtggtggaggtgcccaacatc
agctgggaggacatcggtggtctggaggatgtcaagagggaactccaggagcttgtacag
tacccagtggagcacccagacaagttcttgaagttcggcatgaccccatccaagggcgtg
ctgttctacggacccccaggttgcggtaagaccctgctggccaaggccatcgccaacgag
tgccaggccaacttcatctccatcaaagggccagagttgctcaccatgtggttcggcgag
tctgaggccaatgtccgagagatcttcgacaaggctcgccaggccgccccctgcgtgctc
ttctttgacgagctggactccattgccaaggcgcgtggcggcaacgcgggtgatggtggc
ggagcagccgaccgtgtcatcaaccagatcctgacggagatggacggcatgtccagcaag
aagaacgtcttcatcatcggcgccaccaacaggcctgatatcatcgacccggccatcctg
aggcccggcagactggaccagctcatctacatccccctgccagatgagaagtcccgcatc
aacatcctcggagccaacctcaggaagtcacccatcgccaaggatgtggacctggatttc
ttggccaagatgaccaatggtttctctggagcagacctgacagagatctgccagagggcc
tgtaagatggccatcagggagtccatcgagaacgagatcagaagggaaagggagaggcag
accaacccctcagccatggaggtggaggaggacgaccctgtcccagagatccgtaaggat
cactttgaggaggccatgcgtttcgcccgccgctccgtcagcgacaacgacatccgcaaa
tacgagatgttcgcccagacgttacagcagagcagaggcttcggaagtttccggttcccc
actaactctgcgccaggggccgggcccagccagggctctgctggtggcagcggtggcaca
gtcttcaacgaggacaatgacgacgacctctatggttaa
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