Oncorhynchus kisutch (coho salmon): 109868668
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Entry
109868668 CDS
T09179
Symbol
lhx6
Name
(RefSeq) LIM/homeobox protein Lhx6 isoform X1
KO
K09375
LIM homeobox protein 6/8
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109868668 (lhx6)
Transcription factors [BR:
oki03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
109868668 (lhx6)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
DUF8106
Zn_ribbon_ACC
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
109868668
NCBI-ProteinID:
XP_031659153
Ensembl:
ENSOKIG00005033014
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All DBs
Position
LG23:3799110..3814599
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AA seq
382 aa
AA seq
DB search
MYWKNEVLAPLPEGNKFLSEGIPSKQVISPETPQSTPGASRCVEAKYTHVMSHSDGESHR
SNMEREDTRSSPSPPSTPYICSPISTASSVASTGKNVCASCGLEILDRYLLKVNNLIWHV
RCLECSVCRTSLRQHNSCYIKNKEIFCKMDYFSKFGTKCARCGRQIYASDWVRRARGNAY
HLACFACFSCKRQLSTGEEFGLVEDKVLCRIHYDTMVENLKRAAESGSGITLEGAVPSEQ
DSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQVWFQNCRA
RHKKHTPQHSGPSQGHPQSRMPPSLPDDLHYSPFGSPERARMVALHGYIDSECYVGHPFS
VLTTQSLNPHQAMSLPQLPLSR
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgtattggaaaaatgaggttttggcccctctaccagagggaaataagtttttatccgaa
ggaattccctcaaaacaggtgatttctccagaaacgccgcagagtacaccgggtgcctcg
cgctgcgtggaagccaaatacacacacgtcatgtctcactcggacggagaatcgcaccga
tcgaacatggagagggaggacacgcgctcctccccgagtcccccctctaccccgtatatc
tgctcgcctatctccaccgcctcctcggtggcatccaccgggaagaacgtgtgcgcgagc
tgtggtttggagatcctggacagatacctactcaaggtaaataacttgatctggcacgtg
aggtgtctggagtgttctgtctgccggacgtcgttacgtcaacacaacagttgttacatc
aaaaacaaagagatcttctgtaaaatggattatttcagtaagttcggtacaaagtgtgcc
cggtgcggccgccagatctacgccagcgactgggtgcgtcgggccaggggcaacgcctac
cacctggcgtgcttcgcctgcttctcctgcaagaggcagctgtccacgggggaggagttt
ggcctggtggaggacaaggtgctctgcaggatccactacgacaccatggtggagaacctc
aaacgggctgctgagagcggcagcggcatcactctggagggggcagtgccgtcagagcag
gacagccaacccaagcctgccaagagagcacgcacctccttcacagctgagcagctgcag
gtgatgcaggctcagtttgcgcaggacaacaaccccgatgcacagaccctgcagaagctg
gcggacatgacgggtctcagcaggagagtcatacaggtttggtttcaaaactgcagagca
agacacaaaaagcataccccccagcacagcggaccctcgcaaggccacccccagtcccgg
atgcccccttcgctgcccgacgacctgcattactccccctttggcagtcctgagagggcg
cgtatggtggccctgcacggatacatcgacagtgagtgttacgttggccacccattctcc
gttctaacgacacagagcctgaacccccatcaagccatgtcgctgccccagctacccctc
agccgctaa
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