Oncorhynchus kisutch (coho salmon): 109868892
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Entry
109868892 CDS
T09179
Name
(RefSeq) tumor necrosis factor receptor superfamily member EDAR
KO
K05162
tumor necrosis factor receptor superfamily member EDAR
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
109868892
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
oki04050
]
109868892
Cytokine receptors [BR:
oki04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
109868892
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Death_EDAR
SCIMP
DUF4501
TNFR_c6
RIFIN
Motif
Other DBs
NCBI-GeneID:
109868892
NCBI-ProteinID:
XP_020314228
Ensembl:
ENSOKIG00005019170
LinkDB
All DBs
Position
LG2:57256581..57306536
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AA seq
481 aa
AA seq
DB search
MFQKGSHIESLFLCLLLVSCPPCLRSEYSSCGEFEFYNQTFSSCRPCPPCQPGQEPHMNC
GYGTKDENFVCVSCPAGKYSKGKYEICRRHKDCEGLYRATVLTPGTPDSDADCGPCLPGY
YIQENRPRNLYGMVCHSCQNAPRNTKECMLTKVPSVSTSSTTMFPHPHKDATGQGHLATA
LIIAMSTIFIMAIAIVLIIMFYILKAKPSGQACCSGQVVKAVEAQTNKQEDKKDVPDNVV
IFSEKDEFDKLKPTPPKTVKSENDASSENEQLLSRSMDSDEEAALERQGAADPNPSLCLL
NLGNKPDLCLLSLGLLDRDKTGSNPTSPINANNISNGNANIINNNNYNKATGIQSRRKKI
LDLYARACSVAEGLSPTELPFDCLEKASRMLSSSYSSEAAVVKTWRHLAESFGLKRDEIG
GMSDGLQLFERISTAGYSIPDLLTRLVQIERLDAVESLCSDVLGGGDTHTVPLSSPRCAS
V
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagaaaggaagtcacatagagtccctcttcctctgtttgttgttggtgtcctgt
cctccctgtctcaggtcagagtacagtagttgtggagagtttgaattctacaaccagacc
ttcagtagctgccggccctgtcccccatgccagcctggacaggagccccacatgaactgt
ggctatgggactaaggatgagaactttgtgtgtgtgtcttgtcctgcggggaagtactca
aaggggaagtatgagatctgcaggagacataaggactgtgaaggtctgtaccgcgctaca
gtactcacacctgggacaccagacagtgacgcagactgtggaccctgcttacccgggtat
tacatccaggagaaccggcccaggaacctgtatgggatggtctgtcactcgtgtcagaac
gcaccgcgcaacactaaagagtgcatgcttaccaaagtccccagtgtctcaaccagcagt
actaccatgttccctcaccctcacaaagacgccacaggacagggtcacctagcaaccgct
ctcatcattgccatgtcaaccatcttcatcatggccatcgccatcgtcctcattatcatg
ttctacatcctcaaagccaagcccagcggacaggcgtgctgctcaggtcaggtggtgaag
gctgtggaggctcagaccaacaaacaggaggacaagaaagatgttccagacaacgttgta
attttctctgaaaaggatgaattcgacaaactcaaacccacacctccgaagacggtgaaa
agtgagaatgatgcatcgtcagagaacgagcagctgttgagtcgtagtatggacagtgat
gaggaggcagcgttggagaggcagggggcggctgatcctaaccccagcctctgtcttctg
aacctgggcaacaagccggacctctgcctgctctctctggggcttctcgacagggataag
actggatccaaccccaccagccctatcaacgctaacaacattagcaatggcaatgctaac
atcatcaataacaacaactacaacaaggctacagggattcagagccggaggaagaagatc
ctggatctgtatgctagagcctgcagtgtagccgagggtctgagtcctacagaactaccg
tttgactgtctggagaaggccagtcggatgctgagctcctcctacagtagcgaggcagcc
gtggtgaagacctggagacacctggcagagagctttggcctgaagagggatgagatcgga
gggatgagtgacggcctgcagctgtttgaaaggatcagtaccgccggctatagcatccca
gacctgctcaccagactggtgcagatagagagactggatgctgtggagtcactgtgttct
gatgtactgggaggaggagacacacacactgttcctctgtcctcaccacgctgtgcaagc
gtctga
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