Oncorhynchus kisutch (coho salmon): 109868945
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Entry
109868945 CDS
T09179
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109868945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oki03021
]
109868945
03036 Chromosome and associated proteins [BR:
oki03036
]
109868945
Transcription machinery [BR:
oki03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109868945
Coactivators
SAGA/TFTC/STAGA complex
109868945
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
109868945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
109868945
NCBI-ProteinID:
XP_020314304
Ensembl:
ENSOKIG00005014043
LinkDB
All DBs
Position
LG24:complement(26122135..26133625)
Genome browser
AA seq
968 aa
AA seq
DB search
MAAGSDLLDDVFFNTEVDEKVVSDLVGSLESELTGSGRGKSSVRVQAAANHIDISAVGRN
SNVQDSEMGLSQELAKPGTGVPGGVINSRRSQGSTIYAAVGTTAVGSSMTAGHSPSKTGA
VSGVITEVPDHGAGIRKTGAAGVQTLNGRSVVINSHNSGSVAALVSSASSTVPAVAVVNN
GPSSVVKGNVVLPSTSSTVIQTPLMHNAVTSTVISSQLSVLNSVPTVTLVRPPMQPLGTV
TAQSGSNNTVLIRSVNVAHPASSEAQINTLESPKTTTQTTSEVTGPSVVGKSLVLQNVRT
SIPSTIAACPGGIKAIAPQVFSPRLPQPQQNASNIQNIQLPPGMVLVRSESGQLLMIHQQ
TLAQMQSQSQSAMTPRAATPTSTPPVQITSVQAPGTPMMSRQVTPTTTITKQGSTTQTTV
QATTTLQRPPVLQQNTIMLGGAAATSGQAPVQPCSAAVTQRAGTPGTPGAPTVVSTTEIL
ENVKKCKNFLSTLIKLASSGKQSSETTANVKELVKSLLESKIEAEDFTSRLYRELNSSPQ
PYLVPFLKRSLPALRQMTPDSAAFIQQSQLPHTGAQPSAPSKALTAAVLGGTSTAQNSRL
NSSSPGAKGTMHQFPVISLAQTPHSKPGLMVPQQQGAMGRPQVTLAQSPMVTLRGQPHSH
IIMGQPQVVRQLQTVPVVKQALAPGAKVTMGPQSMLSVVLKNRQKEAGGGTFKDDDDIND
VASMAGVNLSEESARILATNSELVGMVTRSCKDEAFLYTSSLTQRVHEIGGRLGVTNLGP
EVISYVSHATQHRLQNLLEKLTVVAQQKSITFKEDDKCEQVSDVRAQLKFFEQLDQMEKQ
RKEEQEREILMKAAKSRSRQEDPEQLRLKQKAKEMQQQELNQIRQKEANMTALAAIGPRK
KRKMNSPVSGTGAEDLCSGPSPSGGYSSGGSRPQRQRITRVNLRDLLFCLENERETSCSH
LLYKGLLK
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctccgatttactggatgatgttttcttcaacacagaggtggacgagaaa
gtagttagtgatctagtcgggtctttggagtctgagctcacgggatcgggtcgtggaaag
tcttcagttagggtccaggctgcagcaaatcacattgacatctcagctgtaggtcgcaat
tccaatgtccaggacagcgaaatgggactttcacaagagcttgctaaaccagggactggc
gtgccagggggggtcattaatagtaggaggtcccagggttcaaccatatatgctgcggtc
gggacaacggcggtgggatcgagcatgacagccgggcacagtccgagcaagactggggca
gtcagtggtgtgataacggaggttcccgatcacggagctgggatcagaaaaactggggcg
gctggtgtacaaactttaaatggaaggagcgttgtgataaactctcataattcaggaagt
gttgccgctttggtgagctcggcaagcagcacagtgcccgccgtcgcggttgtcaacaac
ggaccgagctccgtagtcaaaggaaacgtagtcttaccctcaacttccagcacagtcatt
caaacacctcttatgcacaatgctgtcacttcaactgtgatatcgtctcagctgtctgtt
ctaaacagtgtgcccactgtcacgctcgtgaggccgcctatgcaacccctcggaacagtc
accgcgcagagcgggagtaataatacggttctgatacgatctgtcaacgttgcccaccct
gcaagttcagaagcgcaaatcaacacattggagtctccaaaaacgaccacacaaacgact
tcagaagtgaccggccccagtgttgtaggtaaaagcctggttttacaaaatgtgaggacc
tccatcccatcgactattgcagcctgtcctggtgggataaaggcgatcgcgccacaggtg
ttctccccgagacttccgcaaccccaacaaaatgcttcaaacatccaaaacattcagctc
cctccaggcatggtgctggtacgcagtgaaagtgggcagcttctgatgatccaccagcag
accctggcccagatgcaatcccagtcccagagcgccatgaccccacgggcagccaccccc
accagcactccccctgtccagatcacttctgtacaggctccagggacgcccatgatgtcc
cgtcaggtgacccccaccaccaccatcactaagcagggctccacgacccagaccaccgtc
caggccaccaccaccctccagaggcctcctgtactacaacagaacaccattatgctgggt
ggagcggccgccacctcaggtcaggctccagtgcagccttgctcggcagcagtcacccag
agagcagggacccctgggacaccaggcgcccccacggtcgtttctaccacggagatcctg
gagaatgtgaagaagtgtaagaacttcctgtccacgctgatcaaactggcatccagcggg
aagcagtcgtctgagaccacagccaacgtcaaggagttagtcaagagcctgctggagagt
aagatcgaagcggaggacttcaccagtcggttataccgggagctcaactcctctcctcag
ccatatctcgtgcctttcctcaagaggagtcttcctgcactgcgtcaaatgaccccagac
tcggcagccttcatccagcagagccagctgcctcacactggcgcccagccttccgccccc
tccaaggccttgactgctgcggtgctggggggcacgtccacggcacagaactcccgtctc
aacagtagtagccctggggccaaggggaccatgcaccagtttcctgttatcagcctggcc
cagacacctcatagcaagcctggcctgatggtgcctcagcagcagggggcaatggggagg
cctcaggtgactctggcccagtcacccatggttactctccgaggccagccccacagtcac
atcatcatggggcaaccgcaggtggtcagacagcttcagacagttcctgtagtgaagcag
gctctagcaccaggagccaaagtaacaatggggccccagtctatgctctctgtagtactg
aagaacaggcagaaggaggcaggcggaggaaccttcaaggatgatgatgatataaatgac
gtggcctctatggctggagtcaacctatcagaggagagtgcccgcattctggcaaccaac
tctgagctggtcggcatggtgactcgctcttgtaaagacgaggccttcctctacacctcc
tcactaacccagagagtacatgagataggcgggaggttaggggtgactaacctggggccg
gaggtgatcagctacgtgtcccatgcaacacagcatcggctgcagaacctgctggagaaa
ttgacggtggtggcgcagcagaaaagcatcaccttcaaggaggatgataagtgtgaacag
gtgagtgacgtgcgagcacagctgaagttctttgagcagctggatcagatggagaaacag
aggaaggaggagcaggagagagagatcctgatgaaggcagctaagtctcgatcacgacaa
gaggacccagagcagcttcggctcaaacagaaggctaaagagatgcagcagcaggaactg
aatcagatcaggcagaaggaggccaacatgacggccctggcagccatcggccccaggaag
aaaaggaaaatgaactcccctgtcagcggaaccggggctgaggacttgtgctctggtccc
tctccgtcaggtgggtacagtagcggaggctccaggcctcagcgccagcgcatcacccgg
gttaacctcagggacctgctcttctgtctggaaaatgagagggagaccagctgctcacac
ctgctctataaaggcctcctcaaataa
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