Oncorhynchus kisutch (coho salmon): 109868948
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Entry
109868948 CDS
T09179
Name
(RefSeq) DDB1- and CUL4-associated factor 1 isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
oki01001
]
109868948
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109868948
Enzymes [BR:
oki01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
109868948
Protein kinases [BR:
oki01001
]
Serine/threonine kinases: Other
Other
109868948
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
109868948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
EIF3I
WDR55
WD40
LisH
WD40_Gbeta
ANAPC4_WD40
Beta-prop_WDR19_1st
WAPL
TPR_CCP1_N
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
109868948
NCBI-ProteinID:
XP_020314310
Ensembl:
ENSOKIG00005015679
LinkDB
All DBs
Position
LG24:29306370..29330733
Genome browser
AA seq
1570 aa
AA seq
DB search
MASASASVDSKAELTALLEHWLEKWEGEQQASTPDLVNILTKISELVERETEEYHKADPD
PFDDRHPGRADPECVLGHLLKILFKDDDFMNALVNSYVMTSRELTLNTAACRLLQNIMPG
LETAVVFQEKEGIVERLFKWAQEAEQPLMIYATGLLAGAMENQDIAANYREENSVLVPLM
LQRLRELQAKDTENRKEFKRPSPRKALGEPLLPLDEETVDGGFEDTPFSSGNNGTERVEK
GPEEDREENPFPPGNNRTEKGPEEDIEDSPFPSNESDNSSHKISSCTSSSIKGLMKPVSA
PQSLSHRDFPDGRAEGSSHLKRRAERENGRKVKQKLNFSLPEPERNFSELSNSSWSEMSP
WVIGNNYHLYPLTPEMEQRLILQYLTPLGEYQELLAVFMQMGACELLIHYMDLKQTNDVQ
LTFEALKYLASLLLHKKFAAQFVAHGGVQKLLEIPKPSMAATGVSLCLYYLAYNQDAMER
VCMLPHSILSDVVSYTLWLLECSHASGCCHATMFFSISFSYRAVLELFDRQDGLRRLVNL
ISTLEILNPEDQAALLSDDQIFSSRQTAKHTCMALRRFFEAHLAIKVEQVKQSLQRTEGG
APIHPQPYYKACSYTHEQVVEMMEFLIEYGPVRLYWEPAEVFHKLSCVQLLLQLISIACD
WRTYYGRSDTVRYALDILSILTVIPKTQLLMAESVAVPDGEGGNAVSTVGMSVVLLVAEG
EVFVNDAEIQKSALQVVINCVCAPDKRMSSIGKFISGTPRRRLPQTTKSSESVLSKMWNV
VQSNNGIKVLLSLLTVKMPITDADQIRALACKALVGLSRSSSVRQIISKLPLFSSGHIQQ
LMKEPVLQDKRSEHVKFCKFAAELIKRVSGKPLMIGTDVSLAWLQRANVVAQSRISFPEK
ELLLLIRNHLVAKGLHDTATTLTKEADLPMAILPHPSSSALLPVVVPPPPASPAPALPRT
PRLANGVAARLASHGSHPSMPLSVQPRPSTSQLLALPPAATPLLTTHQSNGSPLIGRIVF
TRERPSPCPVPASCKKPRVLRQKSDYGAFSQSPAMKKQLDRHLPSPPALDSIITEYLREQ
HARCKNPVTTCPPFSLFTPHQCPEPKQRRQAPTNFTSRNTRRVVYPKYGGVDGGCFDRHL
IFSRFRPMSVFREADEDESGFMCCAFSARERFLMLGTCTGQLKLYNVFTGQEEASYSCHS
SAITHLEPSRDGSLLLTSASWSYPLSALWGMKSVFIMKHSFLDDHYVEFSKLSQDRVIGT
KEHIAHIYDIQTGQKTLTLNYPDLANNYKRNCATFNPTDDLVLNDGVLWDVRSARAIHKF
DKFNMNISGVFHPNGLEVIVNTEIWDLRTFHLLHTVPALDQCRIVFNNNGTVIYGAMLQA
DDDDDIMEMQTKTPFGSSFRTFNATDYKPIATIDVKRNIFDLCTDTKDCYLAVIENQDSV
NTDTVCRLYEVGRQRLAEEEEDEDDQEDDDQDDDDDDDDDSDDDMDTDPLIAELDNENGE
DEEDEEDGNNELSLSDDEVSRLLEGDGEEEDDDDDDDSDDDEEDGDLALDNTDSSDNSDL
EDDIILSLNE
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggcatctgccagcgtggattccaaggcagagctgaccgctctgctggagcat
tggttggagaagtgggagggggagcagcaggctagcacaccagacctggttaacatcctc
accaagatctcagagctggtggagagggagactgaagaatatcacaaagctgatcctgat
ccttttgatgacaggcaccctgggagagctgatccagaatgcgtcttgggtcatctgctt
aagatcctgttcaaagatgatgacttcatgaatgcgctggtgaatagctatgtgatgacc
agcagagagctcacccttaacacggcagcctgtcgcttgctgcagaacatcatgcctggg
ttggagaccgctgtggtctttcaggagaaggagggcatagtggagaggctgtttaaatgg
gcccaggaggctgagcaacccctgatgatctatgctacgggcctgctggctggagccatg
gagaaccaggacatcgctgccaactacagggaggagaactcagtcctggtgcctctaatg
ctgcagcggctacgtgagctgcaggccaaggacactgagaacaggaaggagtttaaacgg
cccagtcccaggaaggccctgggggaacctctccttcctctggatgaggagactgttgat
ggaggcttcgaggacaccccgttctcctctgggaataacggcacagagagggtggagaag
ggaccagaggaggaccgagaggagaaccccttccccccagggaataacagaacagagaag
ggaccagaggaggacatagaggatagccccttccccagcaatgagtctgacaactcttcc
cacaagatcagcagctgcaccagctcgtccattaaaggcctgatgaaacctgtgtctgcc
ccgcagtctctgtcccaccgggacttcccagatggcagggcggagggcagcagtcacctc
aagaggagggcggagagagagaatggacggaaggtgaaacagaagctgaacttctccctg
ccggagccggagaggaacttcagcgagctgtccaacagcagctggtctgagatgagcccc
tgggtgattgggaacaactatcacctttaccctctgaccccggagatggagcagaggctc
atcctacagtacctcacccctctgggggagtaccaggagctgttggctgtcttcatgcag
atgggagcctgtgagctgctcatccattacatggacctgaagcagaccaacgatgtacag
ctcacctttgaggctctcaagtacctggcctccctgctcctgcataagaagtttgcagcc
cagtttgtggcccatggaggagttcagaagcttctggagatccccaagccttccatggcc
gccacaggggtgtctctgtgcctctactacctggcctacaaccaggatgccatggagagg
gtgtgtatgctgcctcactccatcctgtctgacgtggtgagctacactctgtggctgttg
gagtgttcccacgcctcgggctgctgccacgccaccatgttcttctccatttccttctcc
taccgagccgtgctggagctcttcgataggcaggacggcctccgacgcctcgtcaacctg
ataagtacgctggagatcttaaaccctgaagaccaggcggccctgctgagtgatgaccag
atcttctccagcaggcagacagccaagcacacctgcatggccctgcgcaggttcttcgag
gcccatctggccatcaaggtggagcaggtcaagcaatccctgcagcggactgaggggggc
gctcccattcaccctcagccctactacaaggcgtgcagctacactcatgagcaggtggtg
gagatgatggagttcctgatcgagtacggcccagtcagattgtactgggagccagctgag
gttttccacaagctgtcctgtgttcagctgctgctgcagctcatctccattgcttgtgac
tggaggacctactatggcaggagtgacacagtgcgttatgccctggacatactgagcatc
ttgacggtgatcccgaagacccagctgctgatggctgagtctgtggctgtgccagatggg
gaggggggtaatgcagtctccaccgtgggtatgagtgtagtcctgttggtggcggaggga
gaggtgtttgtgaacgacgccgagatccagaagtctgctctgcaggtggtcatcaactgt
gtgtgtgctccggacaaacgcatgtccagcatcggcaagttcatctcgggcacacctcgt
agacgcctgccccagactaccaagagcagcgagagcgtgctcagcaagatgtggaacgtg
gttcagtctaacaacggcatcaaggtgctcctgtccctgctgacggtgaagatgcccatc
acagatgcggatcaaatccgggccctggcctgtaaggccctggtgggtctgtcccgctcc
agctcagtcagacagattatcagcaagctgcctctcttcagcagcggacacatccagcag
cttatgaaggagcctgtgctccaagacaaacgcagcgaacatgtcaaattctgcaagttt
gcggcagagctcatcaagcgagtgtctggtaaacccctcatgatagggacggatgtgtcc
ctggcctggctgcagagggctaatgtggtggcccagtccaggatctccttccctgagaag
gagctactgctgttgatccggaaccacctggtggccaaaggcctgcatgacacggccacc
acactcaccaaggaggccgacctccccatggccatcctcccccacccatcttcctcagct
ttacttcctgtcgttgttccccctcctcctgcctctcctgcccctgccctcccccggacc
cctcggctggccaatggggttgcagcgcggttggcgagccacggctctcatccgtccatg
ccgttgtcagttcagccccgtccctcgacatcgcaactcctcgcactccctccggccgcc
actcccctgttgaccactcaccaaagcaacggctctcccctaattggtcggatcgtgttc
acgcgagagcgcccgtcgccatgccccgtgcctgccagctgtaagaagccgcgggtgctg
aggcagaagtcagattatggtgccttcagccagagtccagccatgaagaaacagctggac
agacacctgccctctccccccgccctggacagcattatcacagagtacctgagggagcag
cacgcacgctgcaagaaccctgtcaccacctgcccccctttctcccttttcaccccccac
cagtgccccgaacccaagcagaggcgccaggccccaaccaacttcacctcccgaaacaca
cgcagggtcgtctaccccaagtatggaggggtggacgggggctgcttcgacagacatctc
atctttagcaggtttcgtcccatgtctgtgttcagggaggcagatgaggatgagagtggg
ttcatgtgttgtgccttctctgcccgtgagcggttcctgatgctggggacgtgtacgggc
cagctcaaactctacaatgtgttcacaggccaggaggaggcgagctacagctgccacagc
tctgccatcacacacctagagccatcacgggatggctctctgttgttgacgtcggcgtca
tggagttatcctctgtctgcactgtggggcatgaagtcagtgttcatcatgaagcattcc
ttcttagatgatcattatgtggagttcagcaaactctcacaagaccgagttattggcaca
aaggaacacatagcccacatctatgacatccagacggggcagaaaaccctgaccctcaac
tacccggacctggccaataactacaagaggaactgtgcgacctttaaccccactgacgac
ctggtgctgaacgacggtgtactgtgggacgtgcgctcggctcgtgccatccacaagttt
gacaagttcaacatgaacatcagtggagtgttccaccccaatggcctggaggtcatcgtc
aacactgagatttgggacctgcggacttttcacctcctccatacagtgccagctctggac
cagtgtaggatcgtcttcaacaacaacggcacggtcatctacggagcgatgctccaggca
gatgatgatgatgacattatggagatgcagacgaagactccctttggctcctccttcagg
acgttcaacgccaccgactacaaacccattgccaccattgacgtgaagaggaatatcttt
gacctctgcacagacaccaaggactgctacctggctgtgattgagaaccaggactcggtc
aacacagacacggtgtgcagactgtacgaggtgggacgccagagactggctgaagaggag
gaggatgaagatgatcaggaggatgacgatcaagatgatgacgacgacgatgatgatgac
tctgatgatgacatggacacggaccctctgatcgctgagctggataacgaaaacggggag
gatgaggaagacgaggaagacgggaacaatgaattatctctctccgacgatgaggtgtct
cgcctgctggagggggatggagaggaggaggatgatgatgatgatgatgactctgatgac
gatgaggaagatggggaccttgccctggataacacagacagctctgataactctgacctt
gaggatgacatcatcctgtccctgaatgagtga
DBGET
integrated database retrieval system
