Oncorhynchus kisutch (coho salmon): 109869092
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Entry
109869092 CDS
T09179
Name
(RefSeq) laminin subunit beta-2-like isoform X1
KO
K06243
laminin, beta 2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04510
Focal adhesion
oki04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109869092
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109869092
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
LAMININ_IV_B
Laminin_N
Alanine_zipper
F5_F8_type_C
EzrA
Motif
Other DBs
NCBI-GeneID:
109869092
NCBI-ProteinID:
XP_031659777
Ensembl:
ENSOKIG00005029579
LinkDB
All DBs
Position
LG24:complement(36834733..36916168)
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AA seq
1797 aa
AA seq
DB search
MHVTPVIFICALAYATAQGPDHAHGCTHGSCYPATGDLLVGREKSLKASSTCGSRKKEPY
CIVSHLQDEKKCFQCDSRRPYDPVYNTISHRIENVITTFKPHRKKSWWQSENGKPDVFIQ
LDLEAEFHFTHLIMTFKTFRPAAMVIERSADFGRNWQVYRYFAYDCASVFPGISKGPLRK
VDDVTCESRYSDIEPSTEGEAIYRVLDPAIHIEDPYSPNIQNQLKITNLRVNFTKLHTLG
DNLLDSRVEIKEKYYYAMYELIVRGNCFCYGHASECAPIDGIKDEEGMVHGRCVCKHNTK
GLNCELCDDFHNDVPWRPAEGRNTNACKKCNCNGHSNQCHFDMAVYLSTGNANGGVCDDC
LHNTMGRTCEMCKPFYYLNPSRDIRDPGVCSACDCDPDGSLNGGICDGHDEPSLGMVAGQ
CRCKDHVEGPRCDKCKSGFFGLSADHPLGCQACQCDPRGTVSERPQCDPVSGDCFCKRQV
TGRSCGQCLPEHWALSHDLNGCRDCDCDVGGATDNHCSMENGQCRCRSHMMGRQCTQVES
GFFFMALDHYTYEAELAMLGQGCSVEQREHQPERPATWTGTGFAKVPEGSSLEFSINNIP
YSMEYDLLIRYESQMPQDWEEVRVTIVRPGPIPTSSPCGNTIPADDMLTVSLPAGSRFVV
LPQSICLEREISYTLHFEFSRYLNGYNVLIPGTTAANILVDSISLLPRYSSLEMFVGGDP
ASIARKQSYERYRCHDGAKSVARPQISDVCAKHITSMSAIINHGALACQCDPQGSVSSVC
EMRGGQCRCRSNVIGRRCDRCAPGTYGFVPAGCRACECSLEGAVTRFCDQLTGQCPCSQG
AFGQRCDGCQAGHWGFPNCKQCLCNGHAEECHQRTGACLNCRENTGGDKCDRCANGYYGN
PVLGTGNGNRCQPCPCPDGPNSGRHFATSCHQDNRNRQVVCNCNQGYTGGMVKRSEGSFK
RSRCEECAPGYYGNPSQPGGRCQPCRCSNNIDMSDLDACDRRTGECKKCLYNTEGPDCGV
CKSGYYGDASRRNCRKCTCNFLGTAQTQCTARDECVCQRATGQCLCLPNTIGLTCDHCEP
NYWNLASGRGCEACGCEPNNAVNPACNEFTGKCQCRDGFGGKICTDCQENYWGDPRIQCR
ACDCDPRGIETSQCGQKTGHCVCQQGVSGVRCDQCARGFSGQFPNCQPCHQCFGDWDRVV
QNLAVRTKTLSERAVEIQNTGLTGAYEKAFRDLEEKLARAQGIVNARNTTTEAVSSLMEL
IEDLRSQIGETTDVLNHLEGDLTSVGNSNVEASNELSALEREAKELNLTSDQLHRQLDIL
KNSNFLGAYESIRSSYNKSRDAEQRANQSTTTTPSTVSQSADTRRKTERLISAKKDDFNR
KNAANKRALGDLNAKAQTLDMKKINEKVCGGPGDSPCVESHCGGAGCRDDEGNRHCGGLN
CNGAVAMAENALEKSKHAEKELNKAMKEVEELFHKVADAKTKAEEAKGKAQAALDKATNT
KNKVERSNNDLRDLIKQIRDFLMQEGADPDSIEAVANRVLELSIPASPQQIRHLAEEIKD
RVRSLSNVDAILKQTQDDVRKAEQLLQEAKKARNRADGVKSTAETVKRALEDAKTAQAAA
EKAIQRAKVDIGETEVRLAQIESETSSSEHDLNNAMDRLGNLGRGIDGLKLKRAKNSMAA
ARAEETATMARDKANDAKQILDGELTDKYHTVQDLVDRKAKTVQEAKKTAERLRDEAKEL
LKDAQDKLQRLAELEKDYEENQKKLEGKARQLDGLEDKMKAILNDINKQIQIYNTCQ
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtgacaccggtcattttcatctgtgccctagcctatgccaccgcccaggggccc
gaccacgcccacggctgtacccatggcagctgttaccccgcaacgggagacctgttggtg
ggccgtgagaagagcctgaaggcctcgtctacctgtggctccaggaagaaagagccttac
tgtatcgtcagtcatctacaggatgagaagaaatgtttccagtgtgactctcgccggcca
tatgacccagtctacaataccatcagtcaccgcattgagaacgttatcacaacgtttaaa
ccacaccgcaagaagtcctggtggcagtcagagaatggaaagcctgatgtcttcattcaa
ctggaccttgaggcagaattccatttcactcatctaatcatgaccttcaagacatttcgc
ccagcagccatggtgattgagcgatcggcagattttggacgtaactggcaggtgtaccgc
tactttgcctacgactgtgcctcggtcttccccgggatatccaaaggtcccctgcgcaag
gtggatgatgtcacctgtgagtcccgctactctgacatcgagccatccacagagggagag
gccatctacagagttttggaccctgccatccacattgaggacccctacagccccaacatt
cagaatcagctgaagatcactaacctgcgtgtgaacttcaccaagctgcacaccctgggt
gacaacctgctggactcccgcgtggagatcaaagagaagtactactacgccatgtatgag
ctgatcgtccgcggcaactgcttctgctatggccacgcctccgagtgtgcccccatcgat
gggatcaaggatgaggagggcatggtccatgggaggtgtgtgtgtaagcacaacaccaag
ggtttgaactgtgagctgtgtgacgacttccataacgacgtgccctggagaccggctgag
ggacgcaacaccaacgcctgcaagaaatgcaactgtaatggtcactccaaccagtgtcac
tttgacatggcggtgtacctgtccacgggcaatgccaacggtggcgtctgtgacgattgt
ctccacaacaccatgggacgcacttgtgagatgtgtaaacccttctattacctgaacccc
agcagggacatcagagacccaggagtctgtagtgcctgtgactgtgatcctgatggttcc
ctgaacgggggcatctgtgacgggcatgatgagccgtccctgggcatggtcgctgggcag
tgccgctgcaaggaccatgtggagggacctcgctgtgacaaatgcaagtctggcttcttc
ggcctgagtgcagaccatcctcttggctgccaagcctgccagtgtgaccccaggggtacg
gtgtcagagagaccacagtgtgaccctgttagcggggactgtttctgcaagcgccaggtc
accggacgcagctgtggccaatgtctgccagaacactgggcactgagtcacgacctgaat
ggctgcagagactgtgactgtgatgtgggcggagccaccgataaccactgctcaatggaa
aatgggcagtgtcgttgtcgtagtcatatgatgggccgtcaatgtacccaggtggagtct
gggttcttcttcatggctctggaccactatacctacgaggctgagctggccatgctggga
cagggctgcagtgtggagcagagggagcaccagcctgagcgccctgccacctggactggc
actgggtttgccaaggtcccagagggcagcagcctggagttctccatcaacaacatcccc
tactccatggagtacgacctcctcattcgctatgagtcgcaaatgccacaggactgggag
gaggtccgtgtgactatcgttcggccagggcccattcccaccagcagcccatgtggaaac
accatccctgcagacgacatgctcactgtttccctgcctgcaggatccaggtttgtcgtg
ctgcctcaatctatctgcttggagagagaaattagctacacgcttcactttgagttcagt
cgctatctgaacgggtacaatgttctcattcccggtacaactgctgccaacattctagtg
gactctatctccctcctccctcgttactcctccctggagatgttcgtcggcggagacccc
gcctccattgcccggaaacagagttacgagcgctaccgctgccatgacggggctaagagt
gtggcacgcccccagatcagtgacgtctgtgccaaacacatcaccagcatgtcagccatc
attaaccatggagctttggcttgccagtgtgacccccagggttcagtcagctcagtgtgt
gaaatgcgcggaggtcagtgtcgctgtaggtccaatgtgattggacggcgctgtgaccgc
tgtgctcctgggacgtacggctttgtacctgcaggatgtagagcctgtgagtgtagccta
gaaggtgcggtcactcggttctgtgaccagctgactgggcagtgcccttgcagccagggt
gcgtttggccagcggtgcgatggctgccaggcaggacactggggcttccccaactgtaag
cagtgcctgtgtaacggacatgctgaggaatgccaccagaggaccggagcctgtctcaac
tgcagggaaaacactggaggggacaaatgtgacaggtgtgccaatggttactacggaaac
ccggtgctgggcacaggtaacggtaaccgatgccagccctgcccctgcccggatggtcct
aacagcggaagacacttcgctacctcctgtcaccaggacaaccgcaacagacaggtggtc
tgtaactgtaaccaaggatacacaggggggatggttaagcgttccgagggttccttcaag
cgttcccggtgtgaggagtgtgccccaggttactacggtaacccctcccagccaggtggg
cggtgccagccgtgcaggtgcagtaacaacattgacatgtcagacctggatgcgtgtgac
cggaggacaggagagtgtaagaagtgtctctacaacacagagggaccggactgtggcgtg
tgcaagagcggttactatggagacgcctcgcgacgcaactgcagaaagtgcacctgtaac
ttcctgggcacagcgcaaacccagtgtacagcgcgggatgagtgtgtctgccaacgtgcc
acagggcagtgcctgtgtctacccaacactatcggcctgacatgtgaccactgtgagccc
aactactggaacctggctagtgggcggggctgtgaggcctgcggctgtgaacccaacaac
gctgtcaacccggcctgcaacgagttcactggaaagtgtcagtgtcgtgacggatttggt
gggaagatctgcacagactgccaagagaactactggggcgacccaaggatccagtgtaga
gcctgtgactgtgacccccggggcatagagacctctcagtgtggccagaagacaggccac
tgcgtgtgtcaacagggggtgtcgggcgtgcgttgtgatcagtgtgcccggggcttctca
ggccagttccctaactgccagccctgccaccagtgctttggggactgggaccgggtggta
cagaacctggctgtccgaaccaagaccctgtcggagcgggctgtggagatccagaacacg
ggcctgactggagcctatgagaaggccttcagagacctggaggagaagctggcacgagct
cagggcatcgtcaatgcccgcaacaccaccacagaggcagtcagcagcctgatggagctc
attgaagacctcaggtctcagataggggagaccacagatgtactgaatcatctggaggga
gacctgaccagtgtagggaacagtaatgttgaggccagtaatgagctcagtgctctagag
agagaggccaaagagctcaacctgacctcagatcagctccaccgccaactggacatcctg
aagaactctaacttcctgggtgcatatgaaagcatccgaagctcctataataagtcccgt
gacgcagagcagcgagccaaccagtccaccactaccacgcccagcactgtcagccaatca
gcagacacccgccgcaagacagaacgcctcatctctgccaagaaagacgacttcaaccgc
aagaatgccgccaacaagcgagccctgggggacctcaatgccaaggcacaaaccctggac
atgaagaagatcaatgagaaggtctgtgggggccctggcgattccccctgtgtagagagc
cattgcggaggggcgggttgccgtgacgacgaggggaacaggcactgtggaggcctgaac
tgcaacggtgccgtagcgatggcagagaacgccttggaaaagtctaagcacgcagagaaa
gagctgaacaaagccatgaaggaggtagaggagctcttccacaaggtggcagatgccaag
accaaggcggaggaggctaagggtaaagcccaggcagctctggacaaggccactaacacc
aagaacaaggtggagcgctccaacaacgacctgcgggacctcatcaagcagatccgggac
ttcctcatgcaggagggtgctgatccagacagcattgaagcggtggctaaccgtgtcctg
gagctgtccatcccagcctcaccacagcagatcagacacctggcagaggagatcaaggac
cgggtccggagcctctccaacgtagacgccattctgaaacagacacaggacgacgtgcgc
aaggcagagcagctgctgcaggaggccaagaaggccaggaatcgggcagacggggtgaaa
tccacagcagagacggtgaaacgggcacttgaggacgctaagacggcccaggctgcagcg
gagaaggccatacagcgggcgaaggttgacattggtgaaacggaagtccgactagcacag
atcgagtctgagacctccagcagtgaacatgacctgaataatgccatggatcgccttggc
aacctgggtcgggggattgacggtctgaaactcaaacgtgcaaaaaacagcatggcagca
gctcgagctgaggagacagccactatggcacgggacaaggccaatgatgccaagcagatt
ttagatggcgagctgacggataagtatcacacagtgcaggacttggtggacaggaaagcc
aagaccgtccaggaggccaaaaagacagcagagcgactgagagacgaggccaaggagcta
ctgaaagacgctcaggacaagctccagagactagcagaactagagaaagactatgaagag
aaccagaaaaagttggagggcaaagcccggcagttggacggcctagaagacaagatgaag
gctatcctcaacgacatcaacaaacagattcagatctacaacacctgtcagtaa
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integrated database retrieval system
