Oncorhynchus kisutch (coho salmon): 109869101
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Entry
109869101 CDS
T09179
Name
(RefSeq) host cell factor 1-like isoform X1
KO
K14966
host cell factor 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03083
Polycomb repressive complex
oki04980
Cobalamin transport and metabolism
oki05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
109869101
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
109869101
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109869101
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oki01009
]
109869101
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oki03036
]
109869101
03029 Mitochondrial biogenesis [BR:
oki03029
]
109869101
Protein phosphatases and associated proteins [BR:
oki01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109869101
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
109869101
HMT complexes
COMPASS/SET1 complex
109869101
MLL-HCF complex
109869101
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
109869101
Mitochondrial biogenesis [BR:
oki03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
109869101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
Kelch_2
fn3
Motif
Other DBs
NCBI-GeneID:
109869101
NCBI-ProteinID:
XP_031660257
Ensembl:
ENSOKIG00005041170
LinkDB
All DBs
Position
LG24:43065358..43126599
Genome browser
AA seq
1895 aa
AA seq
DB search
MASGSVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDELHVYNTATNQ
WFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEWKRLKAKSP
KNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELRAGSSVVGWD
IPITYGVLPPPRESHTAVVYTEKSRLVIYGGMSGCRLGDLWILDIDTLTWNKPSINGTAP
LPRSLHSATTITNKMFVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNLDSMVWESVLLD
SLEDNIPRARAGHCSVAINSRLYVWSGRDGYRKAWNNQVCCKDLWYLETEKPRPPSRVQL
VRANTSSLEVSWGAVPTADTYLLQLQKYDIPPAPAATTPGVSPATPLPVNSSPKSPVSAS
AVSAQGHPLQGITLVPSMPGSPVPARGPAILKVSAPHSTTGASIVTVRQANQGGKSPVMV
TSLPAGVRMVVPAQVAQGTPMGSSPQMSGMAALAAAAAATQKIPPSTATMQLPAGATIVK
TVAMSPGAQTVKVASPVMISNPATRMLKTAAAQVGTSGVATPGTPNRPIITVHKSGTVTV
AQQHQVVTTVVGGVTKTITLVKSPLTLGGGGTLLTAANQGQNKVMSGKDVQHWLSNLSNL
GKVMSVVQTKPGQTGAVTGQAGSSLQHILQTKGPLPAGTILKLVTSADGTPTTIITTSKA
GATVGGKPTILSYSSMPTSTSKPGTHIIKTIPMSSIGQTGVTGSGMKSPITIITTKMMTP
GTGTPGKIISAMPRTGAGQQGLTQVVLKGAPGQPGTILRTVPMGGVRLVSPVTVSGVKPN
VTTLVVKGTTGVTTLGTVTGTVSTSLAGGSVATVAPITTLGTMTTLPGQVTVSAAQAGGQ
ATQVTLITSPSGVEAQPVHDLPVSILSSPTSADPSSTQPEAGDPGTVTLVCSNPPCETHE
TGTTNTATTASANMTGNGGVERVCSNPPCETHETGTTNTQTTASSNMGQVQQVCTNPPSE
THDTGTTNTQTTASCNMGSNQQQQGSCVTNNASGSDPPSSPPSSSGDLSPSSVSGTSSVP
GVLRPETLRTGTTYTSTTARSNMGSDQMGMTLSSSSSDNQSKSSSGGGGGGGSPLTSPVC
SNPPCETHETGTTTTSTQANSSIGIGQTTGTVQKVCSNPPCETHETGTTNTPSQTTSNLT
GTGTVQRVCSSPPCETHETGTTNTPSQTTSNLTGTGTVQRVCSSPPCETHETGTTNTPSQ
TMSNLTGTGTVQRVCSNPPCETHETGTTNTPSQTTSNLTGTGTVQRVCSNPPCETHETGT
TNTATTAQPGDSTQGDNGTQEAPSSSSATTESSASTTSGRAVTTVTQSTPTPGPCVPEIS
SMSGSSEAVASRAEEEEEAMQTDSLPEGTVRVVTLEEAAAAGIHVHVEDMEEQNQGEQEG
LPAELMSEGGSGGQQTLMVTGLTPEELAVTAAAEQAAQHAATEEAQAKAIQAVLQAAQHA
VMNEGDGGHHTTTIPIVLTQAELAALVQQQQQLQEAQALAQAQALAQAQALAQAQALAQA
QAQAAAAQHNQAAAQHNQPTEGLAPADSLNDPASESNADELAAAVTQAVARLAPSCTLTP
TQTMMVTSPAKIQAATTMAEVVNGIESAAGRPAPPPAVAKAPLKKDNQWFDVGIVKVTNT
VVTHYYVPDEDAAAVDDDSGTIPDYSQMRKMDLQPGTAYKFRVAGINTCGRGNFSEVSAF
KTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSAQSGEQAKPTTT
TTPAQLAFMRVFCGPNPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWL
QEISKDGLPGKPTVKRPGSSPDMKPAGPKKARSDQ
NT seq
5688 nt
NT seq
+upstream
nt +downstream
nt
atggcatctggctcagtcctgcagccacggtggaagcgggttttgggttggtccggtcct
gtcccccggccccgacatgggcaccgtgcggttgcaatcaaagaattgatggtcgttttc
ggggggggcaatgaaggaattgtggatgagttgcacgtttataacacagcgaccaaccag
tggttcattcctgctgtccgtggtgatatcccgcctggctgtgctgcgtatggttttgtg
tgcgatggcaccaggctgctggtgttcggagggatggtggaatatggcaaatacagcaac
gatctgtatgaactgcaggctagccgctgggagtggaagcgtctgaaggccaaatctcct
aagaacggccctcctccctgtccccgtctgggccacagcttctccctggtagggaacaaa
tgctaccttttcggaggactggctaacgacagcgaggaccccaagaacaacatccccaga
tacctgaacgatctgtatacgttggagctgcgtgccggctctagtgtggtgggctgggac
atccccatcacctacggggtgttgcccccgcccagagagagccacaccgccgtcgtctac
acagagaagtcccgtctggtcatctatggaggcatgagtggttgtcgtctgggggatctg
tggatcttagacatagacaccctcacatggaataagccctcgatcaacggaacagctcct
ctccctcgcagtctccactctgccacaactatcaccaacaagatgttcgtgttcggaggc
tgggttcccctggtgatggatgacgtcaaagtagcgacacacgagaaggagtggaagtgc
actaacacactggcctgtctcaacctagactcgatggtgtgggagtcagttctactggac
tctctagaggataatatccctcgggcccgagctggacactgctccgtggccatcaactca
cgtctgtacgtctggagcggacgggacggctaccgcaaggcctggaacaaccaggtgtgc
tgtaaggacctctggtacctggagacagagaagccccgccccccgtcgagggtacagctg
gtgagagccaacaccagtagcctggaggtgagctggggggcggtacctactgcagacacc
tacctgttacagctgcagaagtacgatatcccccccgccccggccgccaccacgcccggc
gtcagccccgcgacgccactgccggtcaattcctcccccaaaagccccgtctcggcctcg
gcagtgtccgcccagggccaccctctccagggcatcaccttggtcccctccatgcctggg
agtccagttcctgctcgcggaccagctattcttaaggtgtctgctccccattccaccaca
ggcgcctccatcgtcacggtgagacaggccaaccagggcgggaaatcccctgtcatggtt
acatcacttcctgctggggtccgaatggtggtgccggcccaggtcgcacagggaacccca
atgggcagcagccctcagatgagtggcatggctgcgttggctgcagcagctgcggccact
cagaagatcccgccctccacggccaccatgcagctgccagccggtgccaccatagtcaag
acagtagccatgagccctggcgcacagactgtcaaagtagcttcgcctgttatgattagt
aacccagctactcgcatgctgaagactgctgcggctcaggtgggcacgtcaggtgtcgcc
acacccggaacgcccaatcggccaatcatcaccgtgcacaagtctggcacggtgacagtt
gcccagcaacaccaggtggttaccacggtagtgggaggagtcaccaagaccatcactctg
gttaagagtcccctcactctggggggaggtggcacgctgctgaccgcggccaaccagggt
caaaacaaagtgatgtctgggaaggacgtgcagcattggctgtctaacctgtccaacctg
gggaaggtgatgtccgtggtccagaccaagcctggtcagacaggagcagttacgggacag
gctgggtccagcctccagcacatcctacagacgaagggtcctcttccggcgggtactatc
ctgaagctggtgacgtcagccgacggcacgcccaccaccatcatcaccacttccaaggcc
ggggccaccgtagggggcaagcccaccatcttgtcctacagcagcatgcctacctccacc
tccaagccgggcacccacattatcaagaccatacccatgtcctccatcggacaaactgga
gtgacaggaagtggtatgaagtcccccattaccatcattaccactaagatgatgacacca
ggcaccgggacaccaggcaagatcatcagcgcaatgcccagaactggggctggtcaacag
ggactcacacaggtggtgctgaagggtgccccaggacaacccggaactattttacggacc
gtccccatgggaggtgtacgtctcgtctccccggtaacggtttccggtgtcaaacctaac
gtcaccaccctggtcgtcaagggaaccacaggtgtgactacgttgggtacggtgactggc
acagtgtcgaccagcctggcaggaggaagtgttgccaccgttgctcctatcaccacctta
ggcaccatgacgaccctgccaggacaggtcactgtctccgcagcacaggcaggaggccag
gccacccaggtgaccttaatcacttcccctagcggtgtggaggctcagcctgtccatgac
cttcctgtctccatcctgtcgtcccccacctctgccgacccctcctccacccagcctgag
gcaggcgacccaggaacagtaaccctggtctgctcaaaccccccctgcgagacccacgag
accggcactactaatacagctaccacggcctccgctaacatgactggtaatggtggggtg
gagagggtgtgttcaaacccgccatgcgaaacccacgagaccggcaccaccaacactcaa
acgacagcgtcctccaacatgggccaggtacagcaggtgtgcaccaacccgccgtcagag
acccacgatacaggtaccaccaacacccagaccaccgccagctgtaacatgggatccaac
cagcaacaacaaggctcctgcgtaaccaacaacgccagcgggtctgatcccccgtcctct
ccgccctcctcctccggagacctctccccctcgtctgtttctggtaccagctctgtgccc
ggggtgctacgaccggagactttgagaacagggaccacctacacctcgaccaccgcacgc
tctaacatgggctctgaccagatgggcatgacgctcagctcctcgtcctcagataaccag
agcaagtcatccagcggaggaggaggaggaggaggatcccccctcacatctcctgtctgc
tccaatccaccttgtgaaacacacgagactggaactaccactacgtcgacgcaggccaac
tccagtataggcatcgggcagactacagggacagtgcaaaaggtgtgttccaatcctccg
tgtgaaacacacgaaacagggacgaccaacaccccgtctcagactacgtccaacctgaca
ggaacgggcacggtccagagagtgtgttccagtcctccgtgtgaaacacacgaaacaggg
acgaccaacaccccgtctcagactacgtccaacctgacaggaacgggcacggtccagaga
gtgtgttccagtcctccgtgtgaaacacacgaaacagggacgaccaacaccccgtctcag
actatgtccaacctgacaggaacgggcacggtccagagagtgtgttccaatccaccgtgt
gaaacacacgagaccggcaccaccaacaccccgtctcagactacgtccaacctgacagga
acgggcacggtccagagagtgtgttccaatccaccgtgtgagacacatgagaccggcacc
accaacacagctaccacagcccagcctggtgactcgacacaaggagacaacggaactcaa
gaggctccctcgtcgtcctcggcaaccaccgagtccagcgcatcgacgacatctggcaga
gccgtcaccacagttactcagtccactcccacacctgggccctgcgtacctgagatctca
tcaatgtctgggtcgtccgaggcggtggcatcgagggctgaagaggaagaagaggccatg
cagaccgactctctcccagagggcacagtgagggttgtgaccctggaagaggctgctgca
gctgggatacatgtccatgtggaggacatggaggaacagaaccagggcgagcaggagggc
ctgcctgcggagctgatgtctgaaggtggctcggggggccagcagaccctgatggtgacg
ggtttaacccccgaggagctggctgttaccgctgcagccgagcaggcagcacaacacgct
gctactgaggaggcccaggccaaggccatacaggctgtcttacaggccgcacagcacgct
gtcatgaatgaaggagacggtggccatcacaccaccaccatccccattgtgttgactcag
gctgagctggcagccctggtacaacaacagcagcagctgcaggaggcccaggctcttgct
caggcccaggctcttgctcaggcccaggctcttgctcaggcccaggctcttgctcaggcc
caggcccaagccgcagcagcacaacacaaccaggcagcagcacaacacaaccagcccacc
gagggcctggccccagcagacagcctgaacgacccagcgtcagagagtaacgccgatgag
ctggctgctgcagtgacccaggctgtggcccgattagctccgtcctgcaccttaaccccc
actcagacaatgatggtgaccagcccggctaagatacaggcagctacaaccatggcagag
gtggtcaatggaatagagtctgccgctgggaggccagcaccgcctcctgcggtggccaaa
gccccgctgaagaaagacaaccagtggttcgacgttggcatcgtcaaggttaccaacacg
gtggtcacgcactactacgtacccgacgaagacgcggctgccgttgatgatgactctggg
acgatcccggactacagtcagatgaggaagatggatctccagccagggacggcctataaa
ttcagagtggccgggatcaacacctgtggtcgagggaacttctcagaggtctcggccttc
aagacgtgtctaccgggcttccccggagctccctgtgctatcaagatcagcaagagccca
gatggcgcccacctgacctgggagcctccgtcggtcacatctggtaagatcattgagtac
tcggtgtacctggccatccagagcgcccagagcggggagcaggccaagcccaccaccacc
accaccccagcccagctggctttcatgcgggtgttctgtgggcccaacccttcctgcctg
gtgcagtcgtccagcctctccaacgcacacatagactacaccaccaagcctgccatcatc
ttccgcatcgcagcccgcaacgagaaaggttacggccctgccacgcaggtcaggtggctc
caagagattagtaaagatggccttccaggtaaacctaccgtcaagagaccaggttcctca
cctgacatgaaacctgctggtccgaagaaggccagatcagaccagtga
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integrated database retrieval system
