Oncorhynchus kisutch (coho salmon): 109869158
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Entry
109869158 CDS
T09179
Name
(RefSeq) methyl-CpG-binding domain protein 5 isoform X1
KO
K26585
methyl-CpG-binding domain protein 6
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
109869158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oki03036
]
109869158
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
109869158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
Motif
Other DBs
NCBI-GeneID:
109869158
NCBI-ProteinID:
XP_020314667
Ensembl:
ENSOKIG00005050645
UniProt:
A0A8C7LJG0
LinkDB
All DBs
Position
LG24:24308802..24320504
Genome browser
AA seq
1546 aa
AA seq
DB search
MEIWPCGNPNPIKVLQSSFYKMMGGSESGSGDKDGVHTVAIQVPIGWQRRAKDGLVVYVS
PSGAVLSSLEEVKSYLLTDGTCKCGLECPLVIHKVFNFSLSVKIQQHSQPVGKAEQDMTK
LCNHRRKVVAMAALCRSMQASQLPYVARHTEVTSGIMENRDPKRMRVDREEKERGTYTSK
HHLVQSRPNNNLHPNSCGSPKNSPQLVYSYNGSSPLSHNSTNSYHTPDILRRLPPPLNLP
PNTSPFSSYGAPQRSPRTPTPQNLSQGQRAPQTPEALKSPHMGPLSPPPSSPGTLGRGGQ
SHQHGIIVGSPLSPSCSPSPSVSMNCPSPRQRSRHPSASSAHSEQGVGGVVLGGYPPRRI
SSSSSHSPIPGGSPILHFSKYKLEDILEQIKNSGNSSTNNHILHPNSLSNQNNPHILSLA
LEKVGMPTKAPASASGMEISAGPSGLPLGKFLNHQKQPHPASFPASSLLSAAAKAQLASQ
MIHNQSSNSRSILNSALSLEVSRESKQLKVTNSTLHNSLPSIARPLSAASPLLSLSQPLA
SSPLHLSRTDRTSHRKRQRRSPTVLSMLKESQMTGPRTPGDVLNLSSHSQPSSTSASPYP
AMLENHLQALRLSVRHSGTLAGPQKQPDGALDFTTIMAGQPDPPTQPLSALLHLLSVQNA
QATGAQPGSGHCTGGMRQSPRQSPSPSHLNIRPFPVQSPTNHSTTQGPSQPLSPSQSKSR
RGNAQSPSRPHTRTSPKQRRSPSMALSNTQSAQYCSSPSPTPHTPNRLWQAQNQPMDATT
IQSPIGQAFPEVSESMEMESMSTLGPGLNSTSTSNHSSSVTSYSSTTSPRPLDLSNHMLA
LLAASSTTPIGEGGLDRTTGNNTTGVQEPQSVDHQGSTVTKPPGGCSPQALGDSTCSLPL
AEAFPFMSQEQLLQLLSATAGLPSLLDPTILGSLPLGLWIGGQQGHLPISNTPQQHHQLP
DQQQLLQQSEQQLLLQHEQQQKQHQTAHLNHNFPFSLFPCLMGGQGELPLNLLGLLNPLL
PPSAAPTPGQECDLGMGEKLGLQALLMASLLLGQQQTAMLPLSGLGQLSLDLPFRQHIPA
LLDGLSLDKGSGLLDPSSLPGPGLLEALQGLLPPADGHLQALQSLLLSTPLPPPAFLSLS
PDLLTAALGSTGLPPAPHLPLTQQPPPQVSASGHDGGMETLIPLSVQGKDNPVLHQLLPT
LLNPGVLGDLSALTSLHSLLGLGAGPLFLPPVQASALGMPLLQGPDGAINLLNNIQLNMA
PPSEGEKPISLQETDSSSLQEDIPANRLTPETAPSPCPALAPVSQRGEGSVVSVLDPYTS
FMDTIYTSFLQVSAKEQEAVQSGADAFGALPPSYPGERRSPSALLPQVSAPLSLSPRQAC
TLRNLDLSRLNMEAAHSPAQGTPKPSNDGSNTPPQNKLEFPECHTNPPLLPIYLEEAKTD
SYSQAVSDRQGDRPQAGGYQSPRDGSSCPKEETGALQHTEQGRNQTAQMGGARRGRKRKQ
TLQNVLEDFRELDSPALEEPKPRVVLLKPERSVRGRRRRGARSQRQ
NT seq
4641 nt
NT seq
+upstream
nt +downstream
nt
atggaaatatggccgtgtgggaaccccaaccctataaaggtgctgcaaagcagtttttac
aaaatgatgggaggcagtgagagtggcagtggagacaaggatggagttcacactgtggca
atacaagtccccattggctggcagaggagagcgaaggacgggcttgtggtgtatgtcagt
ccaagtggcgcagtcctgtcctcactggaagaggttaagtcatatctgttgaccgatggc
acatgcaagtgtggcctcgagtgtccgctggtcatccacaaggtgtttaactttagccta
agcgtcaaaattcaacagcacagccagccggtggggaaggcagagcaggacatgacaaag
ctctgtaaccatcggaggaaagtggttgccatggcagcgctctgtcgcagtatgcaggct
tcacaactgccctatgttgcccgtcacacagaggtcaccagtggcattatggagaacaga
gatcctaagaggatgagagtggacagggaagaaaaagaacgtggcacttacacctccaaa
caccatctagtccagtccaggcccaacaataacctccaccccaactcttgtggcagtcct
aaaaattctccccaacttgtgtattcttacaatggctcctcacccctctcacacaatagc
actaactcttatcacacgcctgatattttgaggagactgccacctcctctcaatctcccc
cccaacacctctccattctccagctatggggcacctcagaggtccccacgcacaccaacg
cctcagaatctcagtcagggtcagagggcaccacagactccagaagccctcaaatctcct
catatggggcccctctctccccctccctcctcccctgggacactggggaggggagggcag
agtcatcaacatggtatcatcgttgggtctcccctgtccccctcatgttccccctctccc
tctgtgagtatgaactgcccctctccccgccagcgctcacgccacccctccgcctcttct
gctcactctgagcagggggtgggaggggtggtgcttggtggctacccccccagaaggata
tcctcttcctcctcacactctcctataccaggggggtcccctatcctccatttctcaaaa
tacaagcttgaggacatcttagagcagattaagaactctggcaacagtagcactaataat
cacatccttcacccaaactcactgagcaaccaaaacaatcctcatatcctctctctagct
cttgaaaaggttgggatgcccacaaaggcacctgcttctgcctcaggcatggagatcagt
gctggtccttctggtttgcctcttggaaagttcttgaaccaccagaagcaaccccaccca
gcttcttttcctgccagcagtctcctctcggcagcagccaaggcccagctggccagccag
atgattcacaaccagagctccaattcgcgcagcatcctcaactcagccctctctttggag
gtctcgagggagtctaagcaattgaaggtaacaaacagcactttacacaacagccttccc
tcaatcgctaggcccctgtctgcagcctcccccctgctttccctctcccagcccctagcc
tccagtccccttcacctctcccgtacggaccggacatcccacaggaagcggcagcggcgt
tcgcccacagtgctcagcatgctgaaggagtcccagatgaccggtcccagaacccccggc
gatgtgctcaacctctcctcgcactctcaaccctcctctacctcagcctcgccctacccc
gccatgttagagaaccacctccaggccttaaggctctcagtccggcactctggcacactc
gcagggccccagaagcagcctgacggcgccctggatttcacaacaatcatggcaggtcaa
ccggatccccccacccagcctctctctgctctgcttcacctgctcagtgtgcagaacgct
caagccactggagcccagcccggctctggacactgcacaggaggcatgaggcagagcccc
aggcagtctccctcgccctcccatttaaacatcagaccattccctgtgcagtcccccact
aatcacagtaccacacaaggcccatcacagcccctctctccctctcagtcaaagtccagg
cgaggtaatgcacagtctccgtctcgaccacatacgaggactagtcccaaacagagacgg
tctccttccatggccctgtccaacactcagtcagcacaatattgcagtagcccctcgccc
accccacacacccctaataggttgtggcaggcccaaaaccaacctatggatgccaccacc
atccagtcacccattggccaggcctttcctgaagtcagtgaatcaatggagatggagagc
atgtcaacactaggccctggtctcaacagcacctctacctccaaccatagcagcagcgtc
accagctacagcagcaccacctcccccagacccctggatctcagtaaccacatgctggca
ctgctggcagcctcttccaccacacctattggggaggggggcctggacagaaccaccggc
aacaacactacaggggtgcaagagcctcagagtgttgatcatcagggctccacagtgacc
aaacccccgggaggctgcagcccccaggccctgggggactccacttgctccttacccctg
gctgaagccttccccttcatgagtcaggagcagcttctccagcttctatctgccacagcc
ggcctgccctccctcctggaccccaccatcctgggctctctgcccctgggcctgtggatt
ggcggtcagcagggtcacctccccatctccaacacacctcagcaacaccatcaactgccc
gatcaacaacaactactacaacaatcagaacaacaactactgttacagcatgagcaacag
cagaaacaacaccagactgcccatctgaaccacaactttccatttagcttattcccctgt
ctaatgggaggtcagggagagctgcctctgaatctcctgggtctgttgaacccactgcta
cccccttctgctgcccctaccccaggccaggagtgtgatctggggatgggggagaagctg
ggcctccaggctctcctcatggcctccctgctactaggccagcagcagactgccatgttg
cccctgtctgggcttggccagctgagcctggacctccccttccggcagcacatcccagcc
ctgttggacggtttgtctctggataaagggtctggactcctggacccgtcatccctcccc
ggccctgggcttcttgaggccctccagggcctgcttcccccagctgatgggcacctccag
gccctgcagtcgctcctgctctccacccccctgcctcccccggccttcctttccctcagc
cctgatctgctaactgctgccctgggctctactggcctcccgcctgcccctcatctcccc
ctaacacagcaacccccacctcaggtctcagcttcaggccatgatggggggatggaaact
ctaatccccctgtctgtccagggaaaggacaaccctgtcctccaccagttactgcctact
ctcctcaacccaggggttctaggagacctgtctgctctgaccagcctccacagtcttctg
gggctaggtgcaggccctctcttcctgccccccgtacaggcctctgccttgggcatgcct
ctgctccagggccctgatggggccatcaacctcctcaacaacatccagctcaacatggca
ccaccctcagagggagaaaagccaatctccttacaggaaacagacagctcctcccttcag
gaggatattccagccaatcggcttaccccagagactgcgcccagcccctgtcccgccctg
gcccccgtgtcccagcgtggagagggctccgtggtgagcgtcctggacccctacacttcc
ttcatggacactatctacacctccttcctccaggtcagtgctaaagagcaggaagcagtt
cagtctggggcggatgccttcggtgccttaccgccctcctaccctggggagcgccgttcc
ccctccgctctcctccctcaggtcagtgcccccctctccctgagccctcggcaggcctgc
accctgaggaacctggacctgtcccggctcaatatggaggcagcccactccccggctcag
ggcacccctaaacccagcaacgatggctccaacacgcccccgcagaacaagttggaattc
ccagagtgtcacactaaccctcctctgcttcccatctacctggaggaagccaagacagac
tcgtacagccaggctgtgtcagatcggcagggggacagaccccaggcaggagggtaccag
agtcccagagacgggagcagctgccccaaggaggagactggggctctacagcacacggag
cagggcaggaaccaaactgcacaaatggggggagccagaagaggcaggaaaaggaaacaa
acgctacagaatgtgctagaagacttcagagaactggattctccagccctagaggaacct
aaacccagggtggtgctgctgaagcctgagaggtcggtccggggcaggaggcggcgggga
gccaggtcccagagacagtga
DBGET
integrated database retrieval system
