Oncorhynchus kisutch (coho salmon): 109869164
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Entry
109869164 CDS
T09179
Name
(RefSeq) sodium channel protein type 8 subunit alpha isoform X10
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
109869164
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109869164
Ion channels [BR:
oki04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
109869164
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
FraC
Neur_chan_memb
GPHH
HB_ELP1
Dynamin-like_hel_bact
Motif
Other DBs
NCBI-GeneID:
109869164
NCBI-ProteinID:
XP_020314684
Ensembl:
ENSOKIG00005017970
LinkDB
All DBs
Position
LG24:7437732..7532421
Genome browser
AA seq
1958 aa
AA seq
DB search
MAAPLMAPPGPDSFKYFTAESLANIELRINEEKNKPPPKQDSSHRDDDDDNKPKPNSDLE
AGRNLPFIYGDIPSGMVATPLEDLDPFYQAQKTFIVLNRGKTIFRFSANPALYIISPFNL
FRRIAIKILIHSLFSMIIMCTILTNCIFMTFSDPPEWSKQVEYTFTGIYTFESLVKIVAR
GFCIDGFTFLRDPWNWLDFMVISMAYITEFVDLGNVSALRTFRVLRALKTISVIPGLKTI
VGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVIWPINSTENYLANGSKGF
DWNEYINNDTNFYFLPGQLDALLCGNSSDSGRCPEGYTCMKAGRNPNYGYTSFDSFGWAF
LALFRLMTQDFWENLYMLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQA
TMEEAEQKEAEFKAMLEQIKNQQEAAQANAMATSAGTVSEDVAEDDGGGNLSCSSSEMSK
LSSKSAKERRNRKKKWRQKEQSQREEKGDCEKFVKSESDDGSKRSRFRFPDNRLGRKSSI
MNQSLLSIPGSPFLSRHNSKSSIFSFKGRGKDVGSENEFADDEHSTVEECEERRDSLFSP
YRRSSYTGYHHGGGKRNSTVDCNGVVSLISPGTGGRLLPEPTTEVEVKKKLSGSLMVSVD
QLNTSFGRKERANSVMSVITNTLVEELEESQRSCPPCWYKFSNIFLIWECCPIWLKIKEI
VNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTPHFEEVLSVGNLVFTGIFAVEMFAKLV
AMDPYYYFQEGWNCFDGFIVTLSLVELALADVEGLSVLRSFRLLRVFKLAKSWPTLNMLI
KIIGNSVGALGNLTLVLALIVFIFAVVGMQLFGKNYKDCVCKIALDCKLPRWHMHDFFHS
FLMVFRVLCGEWIETMWDCMEVAGQGMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADNL
AATDDDGEMNNLQISVIRIKKGIAWFKIKLAELVLSLTKKPPVEDEQKPLDDMYNKKLNC
IANHSGVDINRDLDYTKNGNGTTSGIGSSVGKYMIDEDHMSFIHNPNLTVCVPIAVGESD
FENLNTEDFSSESENENSKELDDTSSSEGSTIDIKPDVEVEAVVVEAVEEYLDPENCWTP
ECIIKYPCCDVPITHGWGKYWWFLRKTCYLIVEHNWFETVIIFMILLSSGALAFEDVYIQ
QRKTIRTILEYADSVFTYIFILEMLLKWVAYGFHKYFTNAWCWLDFFIVDVSIISLVANA
LGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSI
MGVNLFAGKYYYCFNQTSEDNFLATEVNNKTQCLALINQNFTEVRWKNVKINFDNVGAGY
LALLQVATFKGWMDIMYAAIDSRRVEDQPIYEDNLYMYIYFVIFIIFGSFFTLNLFIGVI
IDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNYIQGLVFDFVTQQV
FDISIMMLICLNMVTMMVETDDQSDETENILYWVNFIFIVAFTIEFVLKLFALRHYYFTN
GWNVFDTVVVILSIAGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFA
LMMSLPALFNIGLLLFLVMFIFSIFGMSNFGYVKHGAGIDDMYNFETFGNSMICLFMITT
SAGWDGLLLPILNYPPDCDPTMENPGAPSTGNCGNPSVGIFFFVMYIIISFLVVVNMYIA
IILENFSVATEESADPLSEDDFETFYEIWEKFDPSASQFITFQKLGDFADTLEHPFRVPK
PNTIELIAMDMPMVSGDRIHCLDILFAFTKRVLGDSGELDMLRTQMEERFVAANPSKVSY
EPITSTLRRRQEDVSARCIQKAYRAHLLKRGFICKRRPKTKLENGGTNNEEKKESTPSTA
SLPSYDSVTKPDKEKQEENEGERKEKDRNQKDERESKC
NT seq
5877 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaccccttatggcaccaccaggacctgacagcttcaagtattttaccgcggaa
tcattggctaacatcgagctccggatcaacgaggagaagaacaaaccgccgcccaagcag
gacagcagtcaccgtgacgacgacgatgacaacaaacccaagcccaacagtgacctggag
gctgggcggaatctgcccttcatctatggcgacatccctagtggaatggtggcgacacca
ctggaggatttggaccccttttaccaggctcagaaaacattcatagtgctaaacagaggg
aagacaatcttccgctttagtgccaaccctgccttgtacatcataagtccttttaatctt
ttcaggcgaatagctataaaaattttgatacattctcttttcagcatgatcattatgtgt
actattttgaccaactgtatattcatgacttttagtgatcctcctgagtggtccaaacaa
gtagagtacacgttcacagggatttatacgtttgaatctcttgtaaaaattgtcgctcga
ggattctgtatagatgggtttacattcctaagggatccatggaactggctggatttcatg
gtcatttctatggcatatataacagagtttgtggacctgggcaatgtctctgcgctgaga
acattcagagttctccgagcattgaaaactatctctgtcataccaggcctgaagaccatt
gtcggtgctctaatccaatctgtgaagaaattgtcagacgttatgatcctcacggtcttc
tgtctcagtgtcttcgctctgattggactacagctcttcatgggcaacctacggcaaaaa
tgcgtgatttggccaatcaactccaccgagaactacttggccaacggcagcaaaggcttc
gactggaatgaatacatcaataacgacaccaatttctacttcctgcctggacaattggat
gcccttttatgtggcaacagttcagattctggccgctgccccgagggctacacatgcatg
aaagctgggaggaatccaaactacggttacaccagcttcgatagctttggatgggctttc
ctggctctcttcagactcatgacacaggacttctgggagaacctctacatgctgaccctg
cgggcagcagggaagacctacatgatcttctttgtgttggtgatcttcgtggggtccttc
tacctggtcaatctgatcctggctgtggtggccatggcctatgaggagcagaaccaggcc
accatggaggaggccgagcaaaaagaggctgagttcaaagccatgctggagcagatcaag
aaccagcaagaggctgcacaggccaacgccatggcgacgtcggcaggcacggtgtcggag
gacgtagcggaggacgacggtggggggaacctgtcctgtagctcgtcagagatgtccaag
ctcagttccaagagcgccaaggagcggcgcaaccgcaagaagaagtggcgccagaaagag
cagtcacagagggaggagaaaggggactgcgagaagttcgtcaaatccgagtcagacgac
ggcagcaagaggagccgcttccgtttccctgacaaccggttgggtcgaaagtcttccatc
atgaaccagtccctcctcagtatcccaggctcgccgttcctgtcgaggcacaacagcaag
agcagcatcttcagcttcaagggccgcggcaaggacgtgggctccgagaacgagttcgcc
gatgacgagcatagcactgtggaggagtgcgaggagaggcgggactccctgttcagcccg
taccgacggagcagctacacgggctaccaccatggcggcgggaagaggaactcaacggtg
gactgcaacggcgtggtgtcgctgatcagtccggggaccggcggacgccttctgcctgag
cccactactgaggttgaggtgaagaagaagctgtctggttccctgatggtgtctgtggac
cagctcaatacctccttcggaaggaaagagcgggccaacagtgtcatgagcgtcatcacc
aacacactagtggaggaactggaggagtctcagcgtagttgtccaccttgctggtataag
ttctccaacatcttcctcatctgggagtgttgtcccatctggctgaagatcaaggagatt
gtcaacctgatcgtcatggaccctttcgtggacctggccatcaccatctgtatcgtcctc
aacaccctcttcatggccatggagcactaccccatgaccccgcactttgaggaggtgctg
tctgtgggaaatctggtgttcacagggatctttgctgtggagatgtttgccaagctggtt
gccatggatccttactactacttccaggaagggtggaactgctttgatggcttcattgtg
accctatcgttagtggagctggcattggctgacgtggaggggctgtccgtgctcagatca
ttccgattgctaagagtgtttaaactggccaagtcatggcccacactcaacatgctgatc
aagatcatcggtaactctgttggcgccctgggaaacctgaccctcgtcttagcgctcatc
gtcttcatctttgccgtggtcggcatgcagctgttcggcaagaactacaaagactgtgtg
tgtaagatcgccctggactgtaagctgccccgctggcacatgcacgacttcttccactcg
ttcctgatggtgttccgggtgctgtgcggggagtggatcgagaccatgtgggactgtatg
gaggtggccggacagggcatgtgtctcatcgtcttcatgatggtcatggtcatcgggaac
ttggtggtgttgaaccttttccttgccttgctgctgtcctcgttcagcgcagacaactta
gccgcaacagatgacgacggagagatgaacaaccttcagatctccgtcatccgcatcaag
aagggcatcgcctggttcaagatcaagctggcagagttggtgctcagcttgaccaagaag
ccgccggtggaggatgaacagaaacctttagacgacatgtacaacaagaaactgaactgt
atcgccaaccacagtggtgtggatatcaaccgcgacctggactataccaagaatggtaac
ggcaccactagtggtatagggagcagcgtcgggaagtacatgatcgacgaggaccacatg
tccttcatccacaacccgaacctgaccgtgtgcgttcccatcgcggtcggagagtccgac
ttcgagaacctcaacaccgaggacttcagtagcgagtcggagaacgagaacagcaaagag
ctggatgacaccagctcatcggagggcagcaccatagacatcaagcctgatgtggaggtg
gaggcggtggtggtggaggctgtggaagagtacctagacccagaaaactgttggacacct
gagtgtattatcaagtatccatgctgcgacgtgcccatcactcacgggtggggaaaatat
tggtggttcctgagaaagacatgctatctaattgtggagcataactggttcgaaaccgtc
attatctttatgatcctactcagtagtggggccctggcttttgaggatgtgtacatccag
cagaggaagaccatcaggaccatcttggaatacgccgacagtgtgttcacatacatcttt
atcctagagatgttgctcaagtgggtcgcctacggattccacaagtacttcaccaacgcc
tggtgctggctcgacttctttattgtcgatgtgtctataatcagtctggtagctaatgca
ctgggctactcggatctaggtcctattaaatcactaaggacactaagggccttgagaccc
ctcagagccttgtcacgttttgaagggatgagggtggtagtcaacgccctggtgggagcc
atcccctccattatgaatgtgttgctggtttgcctcatcttttggctgattttcagtatc
atgggagtcaacttgtttgcgggcaagtactactactgtttcaaccagacctcagaggat
aactttcttgccaccgaggtcaacaacaagacacagtgcctggcccttattaatcagaac
ttcactgaggtcaggtggaagaatgtcaagatcaactttgacaatgttggtgctggatac
ctggctctgcttcaagtggcaacattcaaaggctggatggatatcatgtacgcagccata
gactccagaagagtggaggaccagcccatctatgaagacaacctctacatgtacatctac
tttgtcatcttcatcatcttcggatccttcttcaccctcaacctcttcattggtgtcatc
attgacaacttcaaccaacagaaaaaaaagtttggaggtcaggacatcttcatgacagag
gaacagaagaagtactacaatgccatgaagaaactgggttcaaagaagccccagaaaccc
attcccagaccacagaactatatccaagggttggtgtttgactttgtgacccagcaagtc
ttcgacatctccattatgatgttgatctgcctcaacatggtcaccatgatggtggagaca
gacgaccagtcggacgagacagagaacatcctctattgggtcaacttcattttcatcgtg
gctttcaccatcgagttcgtcctgaaactcttcgccctgcgccactactacttcaccaat
ggctggaacgtgttcgacacagtcgtggtcatcctgtccatcgcgggcatgttcctggct
gacatcattgagaagtacttcgtttcgccaacccttttcagggttatccgattggctcga
atcggccgcatcctgcgtctgatcaaaggagccaagggcatacggactttactcttcgcc
ttgatgatgtcacttccagccctgttcaacattggcctcctgctcttcctggtcatgttc
atcttcagcatcttcggaatgtccaactttggctacgtcaaacacggggccgggatagac
gatatgtataactttgagaccttcgggaacagcatgatctgcttattcatgatcactact
tctgcaggctgggatggtctcttgctcccaatcctcaactaccctcctgactgtgaccca
accatggagaacccaggtgcaccgtctacaggcaactgcggcaacccctcagtcggcata
tttttctttgtcatgtatatcattatttccttccttgtcgtagtcaatatgtacatcgcc
atcatcttagagaatttcagtgtagcgacagaagagagcgccgacccgctcagtgaagac
gacttcgagaccttctatgaaatctgggagaaattcgacccctccgcttcccagttcatc
accttccaaaaactgggtgactttgccgacaccctggagcaccctttccgcgttcccaaa
cccaacaccatcgagctgatcgcaatggacatgcccatggtcagcggcgaccgcatccac
tgcctggacatcctgtttgccttcaccaagcgtgtgctgggcgacagtggggagctggac
atgctacgcacacagatggaggagcgcttcgtggcggctaacccgtccaaggtctcatac
gagcccatcacttctacactgcgccggcgccaggaggacgtatccgcacggtgcatccag
aaagcctaccgcgctcacctgcttaaacggggcttcatctgcaagcgcaggcccaagacc
aagctggagaatggtgggaccaacaacgaggagaagaaagagagcacaccctccaccgcc
tctcttccctcgtacgacagcgtgaccaaacctgacaaggagaaacaggaggagaacgag
ggagagaggaaagagaaggacagaaaccaaaaagatgagcgtgaatcgaagtgttag
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integrated database retrieval system
