Oncorhynchus kisutch (coho salmon): 109869176
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Entry
109869176 CDS
T09179
Name
(RefSeq) neural cell adhesion molecule L1-like
KO
K06550
L1 cell adhesion molecule
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
109869176
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oki04515
]
109869176
04090 CD molecules [BR:
oki04090
]
109869176
04091 Lectins [BR:
oki04091
]
109869176
Cell adhesion molecules [BR:
oki04515
]
Immunoglobulin superfamily
L1 family
109869176
CD molecules [BR:
oki04090
]
Proteins
109869176
Lectins [BR:
oki04091
]
I-type lectins (Siglecs)
109869176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
fn3
I-set
ig
Ig_2
V-set
Bravo_FIGEY
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_5
C2-set_3
V-set_CD47
Sp38
DUF4998
Motif
Other DBs
NCBI-GeneID:
109869176
NCBI-ProteinID:
XP_031659747
Ensembl:
ENSOKIG00005022257
LinkDB
All DBs
Position
LG24:8536750..8573453
Genome browser
AA seq
1100 aa
AA seq
DB search
MDKRLRHIELNDRVTQGRDGNLYFSHVTADDNRNDYTCNAQYLSARTILSKEPISLTVTI
SNSVVRNRRPQMMRPSGAHSTYHTLRGQSLELECIVQGLPTPTVQWVRKDGQLSESRTLR
DLSDRLLRFSNISESDGGEYQCSANNSQGTVTHIYTVSVEAAPYWTKEPVSQLYAPGETV
RLDCQADGIPSPAVAWSMNGNPITGIDLDPRRTVRHGVLILRDVVFTDTAVYQCQAHNKH
GTILVNTYIFVIELPPQILSADGQTYTVTEGQKAGLHCQTFGSPRPKVTWEVDNGASLLA
DPRVNLLTNGSLQITNISHDDEGLYTCSISNTNMSINAELEVLNRTVILSPPGDLCVRPG
KTVIFTCLAQVDSKLTPPHIQWRRSGQKLMQSYAEDKYTFEGPDLIVANVQTEDEGVYTC
EVITNLDMAEASGSITLVDRPDPPTQLQVSDPKDRGVTLSWTAGDDHNSPVIEFRVEFKD
HVSNEWGWEELKRVSGTEESVNLALQPYVSYHFRVISVNDIGKSDPSTPSDLHSTPPQAP
DNNPEDVRSESTDPDTLVITWEEMDRRVFNGPEFQYKVFWRRVVGDGPTWHSNVTTEPPY
IVTEVGNFSAFEIKVQAVNQKGEGPEPDPVIGYSGENVPLEAPMDVGVVLLNSTAIRVTW
AAVDRDTVRGHLLGYKIHLTRFGSRGHHRGRRAREPESSMVVETGANEEKRVLGGLRPYS
HYALTVTVFNSKGEGPPSDPPLSFSTDEGAPGPPMSLHLESPAETEMTLHWTPPAQPNGV
LKGYLLQYQQIVESDDSPVQVETIDDHTLTKLTLKQLDPKSRYRFYLRGRTSAGDGEPIT
REGATTLDGAPPSNISLSVGEKSVNLSWVPGQRHRSVGFQVQYLNKNSGGKWKQSEKLNS
SQSFYQLKGLTPGSQYRLRFTFSNNTFWETEIRTEGAGVVDVQTGFATQGWFIGLVSAIV
LLLLVLLILCFIKRSKGGKYSVKDKEEGQVDSEARPMKDETFGEYRSLESDNEEKRTASQ
PSLCDESKLCTSEDNLDGYNNGSSAVTEVNMEDSLVSQYSRPSEATPDPGTLQDSSPLNP
TATTPTPTNNGLPNAAAILD
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atggacaagagactccgtcacattgagctgaatgatcgcgtgacccaaggccgggatggg
aacctctacttctctcacgttacagccgacgacaaccgcaacgactacacctgtaatgcc
cagtaccttagtgctcgcaccatcctctccaaggaacccatcagcctcaccgtaaccatc
tctaactcagtggtgcggaaccgaagaccccagatgatgaggccctcaggggcccacagc
acttaccacaccctccggggccagagcctggagctggagtgcatcgtccagggcctccct
acccctacagtccagtgggtgaggaaggacggtcagctgtccgagtctcgtacactcaga
gatctgtctgaccgcctgctgcgcttcagtaacatctcagagagcgacgggggagaatac
cagtgttcagccaacaactcacagggcacggtcacacacatctacaccgtcagcgtcgaa
gctgctccgtactggaccaaggagcccgtgagccagctttatgccccaggagagacagtg
agactggactgtcaggccgatggcattccctcgcctgctgtcgcctggagcatgaatgga
aatcccatcacaggtatagacctggaccccaggcgtactgtgagacacggagttctgatt
ctgagagatgtggtcttcactgatacagcagtctaccagtgtcaggcccacaacaaacac
ggaaccatcctagtcaatacctacatctttgtcatcgagctgccgcctcagatcctgagt
gcggacggacagacatacactgtcacagagggacagaaggctggtctacactgtcagaca
tttgggtctcccagacctaaagttacatgggaggtggacaatggcgcgtctctactggct
gaccccagggttaacctgctgaccaatggaagcctccagatcaccaacatctcccatgac
gacgagggcctgtacacctgctccatcagcaacaccaacatgtcaatcaacgctgagctg
gaggtgctgaacaggacagtgattctgtctcctcccggggacctgtgtgttaggcctggg
aagacggtcatatttacctgcctggctcaggtggactccaaactgacccccccacacatc
caatggaggaggagtggacagaaactaatgcagtcgtacgctgaggacaagtacacgttt
gagggccccgacctgatcgtggccaacgtgcagaccgaggacgagggggtttacacctgt
gaggtcatcactaacctggatatggctgaggccagcggatccatcacgctagtcgaccgt
ccagatcctcccacccagctccaggtctctgaccccaaagaccgtggagtgactctcagc
tggaccgctggagatgaccacaacagccctgtcatagagtttcgggtggagtttaaggat
catgtttctaacgagtggggttgggaggagctgaaacgtgttagtggaaccgaagagagt
gtgaaccttgccctgcagccctatgtgtcctaccatttccgggtcatctccgtcaacgac
atcgggaagagtgatcccagcacgccttctgaccttcacagcacgccacctcaagctcca
gacaacaaccctgaggatgtgaggagtgagtctacagacccagacaccctggtcatcaca
tgggaggaaatggacaggcgtgtgttcaacggaccggagttccagtacaaggtgttctgg
aggagggtagtaggtgacggccccacctggcactctaatgtcaccactgagccaccgtac
attgttactgaagtgggcaacttctcagccttcgagatcaaagtacaggctgtcaatcag
aaaggggagggacctgagccagaccctgtcattggctactccggagagaatgtccccctg
gaggctcctatggatgtgggtgttgtgctgctcaacagtacagccatcagggtaacatgg
gcagcagtggacagagatactgtcagaggacacctactgggatacaagatccacctgaca
aggtttggctccaggggccaccaccggggtcggagggccagagaaccggagagcagcatg
gtggtggagacaggggccaatgaggagaagagggtcctggggggccttagaccctactcc
cactatgccctcacagtcactgtgttcaacagcaagggagaggggcccccctccgacccc
cccctgtccttcagtaccgacgagggagctcctggcccccccatgtctctccacctggaa
agccctgcagagacagagatgacccttcactggaccccccctgctcagcccaacggggtt
ctcaaaggatacctgctgcagtatcaacagatcgtggagagtgatgacagcccggtgcag
gtggagaccatagacgaccacacgttgaccaaactgaccctgaagcagctggaccccaag
agccgttaccgcttctacctgaggggccgcacctcggccggggacggagagcccattact
agggagggcgccaccacgctggatggagctcctccgtccaacatcagcttgtctgtaggt
gagaaatctgttaacctgagctgggtgccaggccagagacacaggagtgtgggcttccag
gtccagtacctcaacaagaacagcggtggaaagtggaagcagtctgagaagctgaactcg
tcccagtcattctaccagctgaagggtctaaccccaggatcacagtaccggctcagattt
accttcagcaacaacaccttctgggagactgagatcaggacagagggagcaggagtggtg
gatgtgcagacaggctttgctactcagggctggttcattgggctcgtgagcgccatcgtg
ctgttgctgctggtactgctcatcctctgcttcatcaagaggagcaaggggggaaagtat
tcagtcaaagataaggaggagggtcaggtagactctgaggcgcgccctatgaaggatgaa
acgttcggagagtacagatctctagaaagcgataacgaggagaagcggacagccagccag
ccgtctctgtgtgacgagagcaagctgtgtaccagtgaggacaacctggatggctacaac
aacggcagcagtgctgtcaccgaggtgaacatggaggattccctggtcagccagtacagc
cggcccagcgaagccaccccggacccgggtacactgcaggacagctcccccctcaacccc
accgccaccaccccaacacccaccaacaacggcctgcctaacgcggcggccatcttagat
tag
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integrated database retrieval system
