Oncorhynchus kisutch (coho salmon): 109869191
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Entry
109869191 CDS
T09179
Symbol
ift88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X7
KO
K16474
intraflagellar transport protein 88
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oki03037
]
109869191 (ift88)
Cilium and associated proteins [BR:
oki03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
109869191 (ift88)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_8
TPR_14
TPR_6
TPR_19
CFAP70_TPR_C
TPR_7
TPR_16
TPR_11
ANAPC3
ARM_TT21_5th
RMD1-3
TPR_9
TPR_10
SNAP
TPR_CcmH_CycH
TPR_17
TPR_YpiA_C
TPR-S
DUF6340
MIT
ARM_TT21_4th
ARM_TT21_N
TPR_15
CFAP70_mid_TPR
TPR_Psidin_N
RPN7
HAT_PRP39_C
DUF4810
Coatomer_E
ARM_TT21_2nd
SHPRH_helical-1st
DUF6584
ARM_TT21
TTC22_N
TPR_24
ARM_TT21_C
SUCH1_C
SPO22
TPR_INTS8
RMD9_mid
RNPP_C
Motif
Other DBs
NCBI-GeneID:
109869191
NCBI-ProteinID:
XP_020314746
Ensembl:
ENSOKIG00005001235
LinkDB
All DBs
Position
LG2:59644159..59665203
Genome browser
AA seq
860 aa
AA seq
DB search
MEHVHLAAEEDDLYSGYNDYNPTFDSEELDNDAGFQQAVRTSHGRRPPMTAKFPGTAIGG
RALGTSFGVESSFGCESRLLKSRMPMASSMGRPMTGAVQDGAARPMTAVRAAGYSSAMTR
GSTFDPLGQSKGPAPPLEGKSEDTPDEKVKILEKKVNDLIEESCLAHGHGDLQLSLDRAK
EAGRKERALVRQREQSGNADHINLDLTYSVLFNLATQYANNDMYAEALNTYQVIVKNKMF
SNAGRLKVNMANIHFKQKNYPKAIKLYRMALDQISNSHKEMRIKIMQNIGVVFIRMGQYS
DAITSFEHIMSECPNIKTGFNLILCYYAIGDRERMKKAFQKLICVPLGIDEEDKYIPPND
DTHANLVIEAIKNDKLHQMERERKALAEKFIMTSAKLIAPAIEATFAAGFDWCVDMVKSS
QYVELANDLEINKAITYLRQRDFNQLEAVETLKTFEKKDSRVKSAAATNLSFLYFLEKDY
DQADRYADLAMTADRYNPAALINKGNTVFVKKDYEKAAEFYKEALRNDSSCTEALYNLGL
TYKRLGRLEESLDCFLKLHAILRNSSQVMWQLANLFEMLEDPHQAIEWLMQLITVTPTDP
QVLAKLGELYDSEGDKSQAFQYYQESFRYFPSNIDVIEWLGAYYIDTQFCEKAIQYFERA
TLIQPTQVKWQLMVASCYRRSGNYQKALETYKDIHRKFPENVECLRFLVRLCTDMGMKEV
QDYATKLKKVEKMKEIREQRVKSAREGSARGTRREGSASSEVDIKAVSHPEPKHSPLLAQ
GRDSGHSSHGTSAKGERLSAKMRALPGSNEPYEASSQRDIDASYVDPLGAPMERPKTAAK
KRNEEDEFADEELGDDLLPE
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggaacatgtacatcttgctgctgaggaagatgacctgtactctggctacaacgactac
aatccaacatttgattcagaggagcttgacaatgatgctggttttcagcaagcagtcagg
acaagccatgggagaaggccccccatgactgccaagtttcctggcactgccattggagga
cgggctttggggacctcttttggagtagagagcagttttggctgtgagagcaggcttctg
aagtctaggatgcccatggcctcatctatgggcagacccatgactggagctgtacaggat
ggagcagctaggcctatgactgcagtcagagcagcaggctactcttcagccatgaccaga
gggtctacatttgacccactgggtcagtccaaaggaccggctcctccattggagggcaaa
agtgaagatacgccggatgagaaggtgaagatcctggagaagaaggtgaacgacctgata
gaagagagctgcctggcacatggtcatggagacctacagttgtcccttgatagagccaaa
gaggcagggcggaaggagagagcgctggtgagacagagggagcagtcaggcaatgcagac
cacatcaacctggacctcacatactctgtcttgtttaacttggcaactcagtatgccaac
aatgacatgtacgcggaggctctgaacacttaccaggtcatcgtaaagaacaagatgttc
agtaatgcaggaaggttaaaagtgaacatggccaacatccacttcaagcagaaaaactac
cccaaggccatcaagttgtaccgcatggccctggaccagatctccaactcccacaaggag
atgaggattaagatcatgcagaacatcggtgtggtcttcatccgcatgggccagtactct
gacgccatcacctcctttgaacacatcatgagcgagtgccccaatattaagacaggcttt
aacctgatcctgtgttactacgccatcggagaccgagagaggatgaagaaggcctttcag
aagctcatctgtgttcctctggggatcgacgaggaagacaagtacatcccacccaacgat
gacacccatgccaaccttgttattgaagccatcaagaacgacaaacttcaccagatggag
agagaacgtaaagccctggctgagaaattcatcatgacatcagccaaactcatcgcccca
gccatcgaggcgacgttcgccgccggatttgactggtgtgtggacatggtgaagagttcc
cagtacgtagaactggccaacgacctagaaatcaacaaagccatcacctacctgagacag
agggacttcaaccagctcgaggctgtggagactctgaagacgtttgagaagaaagacagc
agagtgaagagtgctgcagccactaacctctccttcctctacttcctggagaaagactat
gaccaggctgatcgctatgccgacctggccatgacagccgaccgctacaacccagcggcg
ctcatcaacaagggcaacacagtgtttgtgaagaaggactatgagaaggctgcagagttc
tacaaggaggctctccggaacgactcgtcctgcactgaggccctatataacttaggtctt
acttataagcgtctggggcgtctggaggagtctctggactgtttcctgaagctccacgcc
atcctgaggaacagctcccaggtcatgtggcagctagccaacctctttgagatgttggag
gatcctcaccaggccatagagtggttgatgcaactgatcactgtgacgcccacagacccc
caggtgttggccaaactgggagagctctacgacagtgagggagacaagtctcaggcgttc
cagtactaccaagagtccttcagatatttcccctccaacattgacgttattgagtggctg
ggggcctactacattgacactcagttctgtgagaaggccatccagtactttgagagagcc
acactaatccagccaactcaggtgaaatggcagcttatggtggccagctgctacagaaga
agtggaaactaccagaaagccctggagacttacaaagacatccatcggaaattcccggaa
aacgttgaatgcctgcgtttcctggtgaggctgtgcacagacatggggatgaaagaggtc
caggactatgccaccaaactgaagaaggtggagaagatgaaagagatcagagaacagcgg
gtgaagtcggcgagggagggcagtgctcgaggcacccggagagagggcagcgccagcagt
gaggtggatatcaaagcagtctctcaccctgagcctaaacacagtcctttgctggcccag
gggagagacagtggacacagcagccatggcaccagcgccaagggggagaggctgagcgcc
aagatgagggcactgcctggctccaacgaaccctacgaggccagcagccagcgagacata
gatgcctcctacgtggatccactgggggctccgatggagagaccaaagactgcagctaag
aagcgcaatgaagaggacgagtttgctgatgaagagctgggagatgacctactaccggag
tag
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integrated database retrieval system
